RNA–Protein interactions for RNA: ENST00000457478.1

LINC01250-201, Transcript of long intergenic non-protein coding RNA 1250, humanhuman

TSL 2 BASIC

Gene LINC01250, Length 2,344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01250-201ENST00000457478 NISCHQ9Y2I1 1504 aa28.96■■■□□ 2.23
LINC01250-201ENST00000457478 PELP1Q8IZL8 1130 aaKnown RBP25.74■■□□□ 1.71
LINC01250-201ENST00000457478 CCDC180Q9P1Z9 1646 aa25.72■■□□□ 1.71
LINC01250-201ENST00000457478 ABCC9O60706 1549 aa25.28■■□□□ 1.64
LINC01250-201ENST00000457478 MYT1Q01538 1121 aa25.13■■□□□ 1.61
LINC01250-201ENST00000457478 HRCP23327 699 aa24.93■■□□□ 1.58
LINC01250-201ENST00000457478 DCAF8L2P0C7V8 631 aa24.32■■□□□ 1.48
LINC01250-201ENST00000457478 RB1CC1Q8TDY2 1594 aa24.26■■□□□ 1.47
LINC01250-201ENST00000457478 NACADO15069 1562 aa24.2■■□□□ 1.47
LINC01250-201ENST00000457478 ZCCHC6Q5VYS8 1495 aaKnown RBP24.11■■□□□ 1.45
LINC01250-201ENST00000457478 PPARGC1BQ86YN6 1023 aaKnown RBP24.04■■□□□ 1.44
LINC01250-201ENST00000457478 MYO15BQ96JP2 1530 aa24.02■■□□□ 1.44
LINC01250-201ENST00000457478 SCAF1Q9H7N4 1312 aaKnown RBP24.01■■□□□ 1.43
LINC01250-201ENST00000457478 TTBK1Q5TCY1 1321 aaPredicted RBP23.98■■□□□ 1.43
LINC01250-201ENST00000457478 DCAF1Q9Y4B6 1507 aa23.91■■□□□ 1.42
LINC01250-201ENST00000457478 UNC13AQ9UPW8 1703 aa23.69■■□□□ 1.38
LINC01250-201ENST00000457478 PCGF6Q9BYE7 350 aa23.68■■□□□ 1.38
LINC01250-201ENST00000457478 PABPN1Q86U42 306 aaKnown RBP eCLIP23.65■■□□□ 1.38
LINC01250-201ENST00000457478 SCRIBQ14160 1630 aa23.54■■□□□ 1.36
LINC01250-201ENST00000457478 BICRAQ9NZM4 1560 aa23.51■■□□□ 1.35
LINC01250-201ENST00000457478 SHROOM4Q9ULL8 1493 aa23.22■■□□□ 1.31
LINC01250-201ENST00000457478 DNAJC5BQ9UF47 199 aa23.22■■□□□ 1.31
LINC01250-201ENST00000457478 ACIN1Q9UKV3 1341 aaKnown RBP23.2■■□□□ 1.3
LINC01250-201ENST00000457478 ZEB1P37275 1124 aaPredicted RBP23.19■■□□□ 1.3
LINC01250-201ENST00000457478 BCL11AQ9H165 835 aa23.03■■□□□ 1.28
LINC01250-201ENST00000457478 NEUROD1Q13562 356 aa22.97■■□□□ 1.27
LINC01250-201ENST00000457478 CENPBP07199 599 aaPredicted RBP22.94■■□□□ 1.26
LINC01250-201ENST00000457478 GTF3C3Q9Y5Q9 886 aa22.94■■□□□ 1.26
LINC01250-201ENST00000457478 EIF4G1Q04637 1599 aaKnown RBP22.91■■□□□ 1.26
LINC01250-201ENST00000457478 TRIM26Q12899 539 aaPredicted RBP22.91■■□□□ 1.26
LINC01250-201ENST00000457478 PRKCSHP14314 528 aaPredicted RBP22.9■■□□□ 1.26
LINC01250-201ENST00000457478 CC2D2AQ9P2K1 1620 aa22.83■■□□□ 1.25
LINC01250-201ENST00000457478 FAM9AQ8IZU1 332 aaPredicted RBP22.77■■□□□ 1.24
LINC01250-201ENST00000457478 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
LINC01250-201ENST00000457478 CECR2Q9BXF3 1484 aa22.7■■□□□ 1.22
LINC01250-201ENST00000457478 ERICH6Q7L0X2 663 aa22.58■■□□□ 1.21
LINC01250-201ENST00000457478 SUPT5HO00267 1087 aaKnown RBP22.53■■□□□ 1.2
LINC01250-201ENST00000457478 SMARCA4P51532 1647 aa22.47■■□□□ 1.19
LINC01250-201ENST00000457478 ANP32EQ9BTT0 268 aa22.46■■□□□ 1.19
LINC01250-201ENST00000457478 BAZ1AQ9NRL2 1556 aaPredicted RBP22.45■■□□□ 1.18
LINC01250-201ENST00000457478 APLP2Q06481 763 aa22.4■■□□□ 1.18
LINC01250-201ENST00000457478 ATAD2BQ9ULI0 1458 aa22.37■■□□□ 1.17
LINC01250-201ENST00000457478 NCAPD3P42695 1498 aa22.34■■□□□ 1.17
LINC01250-201ENST00000457478 MROH2BQ7Z745 1585 aa22.33■■□□□ 1.17
LINC01250-201ENST00000457478 SMARCA2P51531 1590 aa22.33■■□□□ 1.17
LINC01250-201ENST00000457478 PEG3Q9GZU2 1588 aa22.22■■□□□ 1.15
LINC01250-201ENST00000457478 HMGXB3Q12766 1538 aa22.22■■□□□ 1.15
LINC01250-201ENST00000457478 DIEXFQ68CQ4 756 aaKnown RBP22.21■■□□□ 1.15
LINC01250-201ENST00000457478 BAZ1BQ9UIG0 1483 aaKnown RBP22.2■■□□□ 1.14
LINC01250-201ENST00000457478 CSRNP3Q8WYN3 585 aa22.12■■□□□ 1.13
LINC01250-201ENST00000457478 LOC105371045A0A1W2PR82 267 aa22.1■■□□□ 1.13
LINC01250-201ENST00000457478 WIZO95785 1651 aa22.1■■□□□ 1.13
LINC01250-201ENST00000457478 RSF1Q96T23 1441 aaPredicted RBP22.07■■□□□ 1.12
LINC01250-201ENST00000457478 CLSPNQ9HAW4 1339 aa21.97■■□□□ 1.11
LINC01250-201ENST00000457478 TRIM41Q8WV44 630 aa21.88■■□□□ 1.09
LINC01250-201ENST00000457478 TSHZ2Q9NRE2 1034 aa21.86■■□□□ 1.09
LINC01250-201ENST00000457478 NESP48681 1621 aa21.86■■□□□ 1.09
LINC01250-201ENST00000457478 TOP2AP11388 1531 aaKnown RBP21.84■■□□□ 1.09
LINC01250-201ENST00000457478 ERCC6Q03468 1493 aa21.8■■□□□ 1.08
LINC01250-201ENST00000457478 LAMC3Q9Y6N6 1575 aa21.76■■□□□ 1.07
LINC01250-201ENST00000457478 YTHDC1Q96MU7 727 aaKnown RBP21.72■■□□□ 1.07
LINC01250-201ENST00000457478 CADPSQ9ULU8 1353 aa21.71■■□□□ 1.07
LINC01250-201ENST00000457478 SUPT16HQ9Y5B9 1047 aaKnown RBP21.69■■□□□ 1.06
LINC01250-201ENST00000457478 CCER1Q8TC90 406 aaPredicted RBP21.66■■□□□ 1.06
LINC01250-201ENST00000457478 PDS5BQ9NTI5 1447 aa21.64■■□□□ 1.05
LINC01250-201ENST00000457478 ZNF316A6NFI3 1004 aaPredicted RBP21.61■■□□□ 1.05
LINC01250-201ENST00000457478 CCDC88BA6NC98 1476 aa21.61■■□□□ 1.05
LINC01250-201ENST00000457478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.59■■□□□ 1.05
LINC01250-201ENST00000457478 KIF21AQ7Z4S6 1674 aa21.57■■□□□ 1.04
LINC01250-201ENST00000457478 CFTRP13569 1480 aa21.56■■□□□ 1.04
LINC01250-201ENST00000457478 CUX2O14529 1486 aa21.52■■□□□ 1.04
LINC01250-201ENST00000457478 THOC2Q8NI27 1593 aaKnown RBP21.5■■□□□ 1.03
LINC01250-201ENST00000457478 MIER1Q8N108 512 aa21.49■■□□□ 1.03
LINC01250-201ENST00000457478 FANCD2Q9BXW9 1451 aa21.48■■□□□ 1.03
LINC01250-201ENST00000457478 CEP164Q9UPV0 1460 aa21.45■■□□□ 1.03
LINC01250-201ENST00000457478 MRC2Q9UBG0 1479 aa21.41■■□□□ 1.02
LINC01250-201ENST00000457478 MYT1LQ9UL68 1186 aa21.39■■□□□ 1.02
LINC01250-201ENST00000457478 ANO8Q9HCE9 1232 aaPredicted RBP21.37■■□□□ 1.01
LINC01250-201ENST00000457478 PRDM2Q13029 1718 aa21.37■■□□□ 1.01
LINC01250-201ENST00000457478 WDR62O43379 1518 aa21.32■■□□□ 1
LINC01250-201ENST00000457478 UBE2Q2Q8WVN8 375 aa21.32■■□□□ 1
LINC01250-201ENST00000457478 URB2Q14146 1524 aaKnown RBP21.26■□□□□ 0.99
LINC01250-201ENST00000457478 ERICH6BQ5W0A0 696 aa21.23■□□□□ 0.99
LINC01250-201ENST00000457478 RBM19Q9Y4C8 960 aaKnown RBP21.23■□□□□ 0.99
LINC01250-201ENST00000457478 MSH5O43196 834 aa21.12■□□□□ 0.97
LINC01250-201ENST00000457478 TOPBP1Q92547 1522 aa21.12■□□□□ 0.97
LINC01250-201ENST00000457478 ABCC8Q09428 1581 aa21.09■□□□□ 0.97
LINC01250-201ENST00000457478 DNMBPQ6XZF7 1577 aa21.08■□□□□ 0.97
LINC01250-201ENST00000457478 DEKP35659 375 aaKnown RBP21.06■□□□□ 0.96
LINC01250-201ENST00000457478 FANCIQ9NVI1 1328 aa21.06■□□□□ 0.96
LINC01250-201ENST00000457478 SALL2Q9Y467 1007 aaPredicted RBP21.05■□□□□ 0.96
LINC01250-201ENST00000457478 SLC24A1O60721 1099 aa21.04■□□□□ 0.96
LINC01250-201ENST00000457478 IFT140Q96RY7 1462 aa20.99■□□□□ 0.95
LINC01250-201ENST00000457478 EIF5BO60841 1220 aaKnown RBP20.98■□□□□ 0.95
LINC01250-201ENST00000457478 CUX1P39880 1505 aa20.95■□□□□ 0.94
LINC01250-201ENST00000457478 POLA1P09884 1462 aaPredicted RBP20.94■□□□□ 0.94
LINC01250-201ENST00000457478 ZNF608Q9ULD9 1512 aaPredicted RBP20.92■□□□□ 0.94
LINC01250-201ENST00000457478 DNAJC5Q9H3Z4 198 aa20.91■□□□□ 0.94
LINC01250-201ENST00000457478 FGD5Q6ZNL6 1462 aa20.9■□□□□ 0.94
LINC01250-201ENST00000457478 SOGA1O94964 1423 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms