RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 NISCHQ9Y2I1 1504 aa32.89■■■□□ 2.86
SPOCK3-226ENST00000541354 CCDC180Q9P1Z9 1646 aa28.83■■■□□ 2.21
SPOCK3-226ENST00000541354 ZCCHC6Q5VYS8 1495 aaKnown RBP27.71■■■□□ 2.03
SPOCK3-226ENST00000541354 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
SPOCK3-226ENST00000541354 MYO15BQ96JP2 1530 aa27.12■■□□□ 1.93
SPOCK3-226ENST00000541354 NACADO15069 1562 aa26.74■■□□□ 1.87
SPOCK3-226ENST00000541354 ABCC9O60706 1549 aa26.61■■□□□ 1.85
SPOCK3-226ENST00000541354 DCAF8L2P0C7V8 631 aa26.55■■□□□ 1.84
SPOCK3-226ENST00000541354 SHROOM4Q9ULL8 1493 aa26.43■■□□□ 1.82
SPOCK3-226ENST00000541354 RB1CC1Q8TDY2 1594 aa26.4■■□□□ 1.82
SPOCK3-226ENST00000541354 SCRIBQ14160 1630 aa26.15■■□□□ 1.78
SPOCK3-226ENST00000541354 UNC13AQ9UPW8 1703 aa25.78■■□□□ 1.72
SPOCK3-226ENST00000541354 SUPT5HO00267 1087 aaKnown RBP25.55■■□□□ 1.68
SPOCK3-226ENST00000541354 BICRAQ9NZM4 1560 aa25.5■■□□□ 1.67
SPOCK3-226ENST00000541354 RSF1Q96T23 1441 aaPredicted RBP25.49■■□□□ 1.67
SPOCK3-226ENST00000541354 BAZ1AQ9NRL2 1556 aaPredicted RBP25.44■■□□□ 1.66
SPOCK3-226ENST00000541354 CECR2Q9BXF3 1484 aa25.33■■□□□ 1.65
SPOCK3-226ENST00000541354 MROH2BQ7Z745 1585 aa25.28■■□□□ 1.64
SPOCK3-226ENST00000541354 SMARCA4P51532 1647 aa25.25■■□□□ 1.63
SPOCK3-226ENST00000541354 PEG3Q9GZU2 1588 aa25.11■■□□□ 1.61
SPOCK3-226ENST00000541354 WIZO95785 1651 aa25.08■■□□□ 1.6
SPOCK3-226ENST00000541354 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
SPOCK3-226ENST00000541354 PABPN1Q86U42 306 aaKnown RBP eCLIP24.98■■□□□ 1.59
SPOCK3-226ENST00000541354 SMARCA2P51531 1590 aa24.87■■□□□ 1.57
SPOCK3-226ENST00000541354 CHIC1Q5VXU3 224 aa24.76■■□□□ 1.55
SPOCK3-226ENST00000541354 ATAD2BQ9ULI0 1458 aa24.74■■□□□ 1.55
SPOCK3-226ENST00000541354 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
SPOCK3-226ENST00000541354 HMGXB3Q12766 1538 aa24.66■■□□□ 1.54
SPOCK3-226ENST00000541354 CCDC88BA6NC98 1476 aa24.6■■□□□ 1.53
SPOCK3-226ENST00000541354 NCAPD3P42695 1498 aa24.6■■□□□ 1.53
SPOCK3-226ENST00000541354 BAZ1BQ9UIG0 1483 aaKnown RBP24.6■■□□□ 1.53
SPOCK3-226ENST00000541354 CC2D2AQ9P2K1 1620 aa24.25■■□□□ 1.47
SPOCK3-226ENST00000541354 TRIM41Q8WV44 630 aa24.2■■□□□ 1.46
SPOCK3-226ENST00000541354 PRDM2Q13029 1718 aa24.12■■□□□ 1.45
SPOCK3-226ENST00000541354 CFTRP13569 1480 aa24.06■■□□□ 1.44
SPOCK3-226ENST00000541354 ABCC8Q09428 1581 aa24.01■■□□□ 1.43
SPOCK3-226ENST00000541354 WRNQ14191 1432 aaPredicted RBP eCLIP24■■□□□ 1.43
SPOCK3-226ENST00000541354 EEA1Q15075 1411 aa23.97■■□□□ 1.43
SPOCK3-226ENST00000541354 BIVM-ERCC5R4GMW8 1640 aa23.92■■□□□ 1.42
SPOCK3-226ENST00000541354 TOP2BQ02880 1626 aa23.9■■□□□ 1.42
SPOCK3-226ENST00000541354 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
SPOCK3-226ENST00000541354 SYNJ1O43426 1573 aa23.86■■□□□ 1.41
SPOCK3-226ENST00000541354 LAMC3Q9Y6N6 1575 aa23.78■■□□□ 1.4
SPOCK3-226ENST00000541354 CUX1P39880 1505 aa23.67■■□□□ 1.38
SPOCK3-226ENST00000541354 LOC105371045A0A1W2PR82 267 aa23.6■■□□□ 1.37
SPOCK3-226ENST00000541354 SOGA1O94964 1423 aa23.6■■□□□ 1.37
SPOCK3-226ENST00000541354 KIF21BO75037 1637 aa23.59■■□□□ 1.37
SPOCK3-226ENST00000541354 FANCD2Q9BXW9 1451 aa23.59■■□□□ 1.37
SPOCK3-226ENST00000541354 DNMBPQ6XZF7 1577 aa23.53■■□□□ 1.36
SPOCK3-226ENST00000541354 CSRNP3Q8WYN3 585 aa23.53■■□□□ 1.36
SPOCK3-226ENST00000541354 PDS5BQ9NTI5 1447 aa23.5■■□□□ 1.35
SPOCK3-226ENST00000541354 CEP164Q9UPV0 1460 aa23.5■■□□□ 1.35
SPOCK3-226ENST00000541354 FAM9AQ8IZU1 332 aaPredicted RBP23.48■■□□□ 1.35
SPOCK3-226ENST00000541354 GOLGA3Q08378 1498 aa23.48■■□□□ 1.35
SPOCK3-226ENST00000541354 HRCP23327 699 aa23.47■■□□□ 1.35
SPOCK3-226ENST00000541354 RUSC2Q8N2Y8 1516 aa23.45■■□□□ 1.34
SPOCK3-226ENST00000541354 TNIKQ9UKE5 1360 aa23.45■■□□□ 1.34
SPOCK3-226ENST00000541354 ERICH3Q5RHP9 1530 aa23.42■■□□□ 1.34
SPOCK3-226ENST00000541354 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
SPOCK3-226ENST00000541354 NESP48681 1621 aa23.41■■□□□ 1.34
SPOCK3-226ENST00000541354 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
SPOCK3-226ENST00000541354 PCGF6Q9BYE7 350 aa23.37■■□□□ 1.33
SPOCK3-226ENST00000541354 FGD5Q6ZNL6 1462 aa23.37■■□□□ 1.33
SPOCK3-226ENST00000541354 PRXQ9BXM0 1461 aa23.33■■□□□ 1.33
SPOCK3-226ENST00000541354 ABCA10Q8WWZ4 1543 aa23.3■■□□□ 1.32
SPOCK3-226ENST00000541354 KIF21AQ7Z4S6 1674 aa23.3■■□□□ 1.32
SPOCK3-226ENST00000541354 URB2Q14146 1524 aaKnown RBP23.27■■□□□ 1.32
SPOCK3-226ENST00000541354 WDR97A6NE52 1622 aa23.26■■□□□ 1.31
SPOCK3-226ENST00000541354 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
SPOCK3-226ENST00000541354 TRIM26Q12899 539 aaPredicted RBP23.23■■□□□ 1.31
SPOCK3-226ENST00000541354 CEP162Q5TB80 1403 aa23.22■■□□□ 1.31
SPOCK3-226ENST00000541354 CUX2O14529 1486 aa23.21■■□□□ 1.31
SPOCK3-226ENST00000541354 MRC2Q9UBG0 1479 aa23.19■■□□□ 1.3
SPOCK3-226ENST00000541354 DNAJC5BQ9UF47 199 aa23.17■■□□□ 1.3
SPOCK3-226ENST00000541354 RAPGEF2Q9Y4G8 1499 aa23.17■■□□□ 1.3
SPOCK3-226ENST00000541354 CUL7Q14999 1698 aa23.15■■□□□ 1.3
SPOCK3-226ENST00000541354 IGF1RP08069 1367 aa23.12■■□□□ 1.29
SPOCK3-226ENST00000541354 WDR62O43379 1518 aa23.11■■□□□ 1.29
SPOCK3-226ENST00000541354 ABCA5Q8WWZ7 1642 aa23.1■■□□□ 1.29
SPOCK3-226ENST00000541354 UBTFP17480 764 aaKnown RBP23.08■■□□□ 1.29
SPOCK3-226ENST00000541354 TARBP1Q13395 1621 aaKnown RBP23.08■■□□□ 1.28
SPOCK3-226ENST00000541354 RAD54L2Q9Y4B4 1467 aa23.04■■□□□ 1.28
SPOCK3-226ENST00000541354 CLIP1P30622 1438 aa23.02■■□□□ 1.28
SPOCK3-226ENST00000541354 CARMIL1Q5VZK9 1371 aa23■■□□□ 1.27
SPOCK3-226ENST00000541354 IFT140Q96RY7 1462 aa22.97■■□□□ 1.27
SPOCK3-226ENST00000541354 THOC2Q8NI27 1593 aaKnown RBP22.96■■□□□ 1.27
SPOCK3-226ENST00000541354 GAPVD1Q14C86 1478 aa22.94■■□□□ 1.26
SPOCK3-226ENST00000541354 EHMT2Q96KQ7 1210 aa22.92■■□□□ 1.26
SPOCK3-226ENST00000541354 VPS8Q8N3P4 1428 aa22.91■■□□□ 1.26
SPOCK3-226ENST00000541354 ERCC6Q03468 1493 aa22.88■■□□□ 1.25
SPOCK3-226ENST00000541354 PBRM1Q86U86 1689 aa22.88■■□□□ 1.25
SPOCK3-226ENST00000541354 CTTNBP2Q8WZ74 1663 aa22.85■■□□□ 1.25
SPOCK3-226ENST00000541354 EFCAB5A4FU69 1503 aa22.81■■□□□ 1.24
SPOCK3-226ENST00000541354 GRIN2BQ13224 1484 aa22.8■■□□□ 1.24
SPOCK3-226ENST00000541354 ARAP1Q96P48 1450 aa22.79■■□□□ 1.24
SPOCK3-226ENST00000541354 ADAMTS12P58397 1594 aa22.77■■□□□ 1.24
SPOCK3-226ENST00000541354 FHAD1B1AJZ9 1412 aa22.77■■□□□ 1.24
SPOCK3-226ENST00000541354 ZEB1P37275 1124 aaPredicted RBP22.76■■□□□ 1.23
SPOCK3-226ENST00000541354 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
SPOCK3-226ENST00000541354 ARHGAP35Q9NRY4 1499 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms