RNA–Protein interactions for RNA: ENST00000540670.6

LONP1-202, Transcript of lon peptidase 1, mitochondrial, humanhuman

TSL 2 BASIC

Gene LONP1, Length 3,002 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONP1-202ENST00000540670 NISCHQ9Y2I1 1504 aa28.29■■■□□ 2.12
LONP1-202ENST00000540670 HRCP23327 699 aa24.63■■□□□ 1.53
LONP1-202ENST00000540670 SHROOM4Q9ULL8 1493 aa24.4■■□□□ 1.5
LONP1-202ENST00000540670 PPARGC1BQ86YN6 1023 aaKnown RBP24.32■■□□□ 1.48
LONP1-202ENST00000540670 CCDC180Q9P1Z9 1646 aa24.25■■□□□ 1.47
LONP1-202ENST00000540670 SUPT5HO00267 1087 aaKnown RBP24.24■■□□□ 1.47
LONP1-202ENST00000540670 PELP1Q8IZL8 1130 aaKnown RBP24.16■■□□□ 1.46
LONP1-202ENST00000540670 PCGF6Q9BYE7 350 aa24.1■■□□□ 1.45
LONP1-202ENST00000540670 ZCCHC6Q5VYS8 1495 aaKnown RBP23.83■■□□□ 1.41
LONP1-202ENST00000540670 MYO15BQ96JP2 1530 aa23.67■■□□□ 1.38
LONP1-202ENST00000540670 SCAF1Q9H7N4 1312 aaKnown RBP23.6■■□□□ 1.37
LONP1-202ENST00000540670 DCAF8L2P0C7V8 631 aa23.58■■□□□ 1.37
LONP1-202ENST00000540670 CHIC1Q5VXU3 224 aa23.38■■□□□ 1.33
LONP1-202ENST00000540670 MYT1Q01538 1121 aa23.26■■□□□ 1.31
LONP1-202ENST00000540670 DCAF1Q9Y4B6 1507 aa23.22■■□□□ 1.31
LONP1-202ENST00000540670 LOC105371045A0A1W2PR82 267 aa23.11■■□□□ 1.29
LONP1-202ENST00000540670 TRIM26Q12899 539 aaPredicted RBP23.06■■□□□ 1.28
LONP1-202ENST00000540670 EHMT2Q96KQ7 1210 aa23.02■■□□□ 1.28
LONP1-202ENST00000540670 ZEB1P37275 1124 aaPredicted RBP22.9■■□□□ 1.26
LONP1-202ENST00000540670 ABCC9O60706 1549 aa22.87■■□□□ 1.25
LONP1-202ENST00000540670 ACIN1Q9UKV3 1341 aaKnown RBP22.83■■□□□ 1.25
LONP1-202ENST00000540670 NEUROD1Q13562 356 aa22.83■■□□□ 1.25
LONP1-202ENST00000540670 GTF3C3Q9Y5Q9 886 aa22.76■■□□□ 1.23
LONP1-202ENST00000540670 SCRIBQ14160 1630 aa22.65■■□□□ 1.22
LONP1-202ENST00000540670 FAM9AQ8IZU1 332 aaPredicted RBP22.63■■□□□ 1.21
LONP1-202ENST00000540670 NACADO15069 1562 aa22.54■■□□□ 1.2
LONP1-202ENST00000540670 CENPBP07199 599 aaPredicted RBP22.48■■□□□ 1.19
LONP1-202ENST00000540670 TTBK1Q5TCY1 1321 aaPredicted RBP22.31■■□□□ 1.16
LONP1-202ENST00000540670 DIEXFQ68CQ4 756 aaKnown RBP22.29■■□□□ 1.16
LONP1-202ENST00000540670 RB1CC1Q8TDY2 1594 aa22.27■■□□□ 1.16
LONP1-202ENST00000540670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.22■■□□□ 1.15
LONP1-202ENST00000540670 RSF1Q96T23 1441 aaPredicted RBP22.22■■□□□ 1.15
LONP1-202ENST00000540670 YTHDC1Q96MU7 727 aaKnown RBP22.16■■□□□ 1.14
LONP1-202ENST00000540670 CCER1Q8TC90 406 aaPredicted RBP22.14■■□□□ 1.13
LONP1-202ENST00000540670 CECR2Q9BXF3 1484 aa22.11■■□□□ 1.13
LONP1-202ENST00000540670 TRIM41Q8WV44 630 aa22.07■■□□□ 1.12
LONP1-202ENST00000540670 BCL11AQ9H165 835 aa21.99■■□□□ 1.11
LONP1-202ENST00000540670 MROH2BQ7Z745 1585 aa21.98■■□□□ 1.11
LONP1-202ENST00000540670 UNC13AQ9UPW8 1703 aa21.91■■□□□ 1.1
LONP1-202ENST00000540670 WIZO95785 1651 aa21.82■■□□□ 1.08
LONP1-202ENST00000540670 PABPN1Q86U42 306 aaKnown RBP eCLIP21.8■■□□□ 1.081e-7■■□□□ 11.8
LONP1-202ENST00000540670 BAZ1AQ9NRL2 1556 aaPredicted RBP21.75■■□□□ 1.07
LONP1-202ENST00000540670 MIER1Q8N108 512 aa21.72■■□□□ 1.07
LONP1-202ENST00000540670 ANP32EQ9BTT0 268 aa21.72■■□□□ 1.07
LONP1-202ENST00000540670 ZNF316A6NFI3 1004 aaPredicted RBP21.71■■□□□ 1.07
LONP1-202ENST00000540670 BICRAQ9NZM4 1560 aa21.7■■□□□ 1.06
LONP1-202ENST00000540670 SMARCA4P51532 1647 aa21.63■■□□□ 1.05
LONP1-202ENST00000540670 CSRNP3Q8WYN3 585 aa21.58■■□□□ 1.05
LONP1-202ENST00000540670 TSHZ2Q9NRE2 1034 aa21.52■■□□□ 1.04
LONP1-202ENST00000540670 SUPT16HQ9Y5B9 1047 aaKnown RBP21.51■■□□□ 1.03
LONP1-202ENST00000540670 TOP2AP11388 1531 aaKnown RBP21.47■■□□□ 1.03
LONP1-202ENST00000540670 CCDC88BA6NC98 1476 aa21.39■■□□□ 1.01
LONP1-202ENST00000540670 RANGAP1P46060 587 aaPredicted RBP21.35■■□□□ 1.01
LONP1-202ENST00000540670 SMARCA2P51531 1590 aa21.34■■□□□ 1.01
LONP1-202ENST00000540670 PRKCSHP14314 528 aaPredicted RBP21.34■■□□□ 1.01
LONP1-202ENST00000540670 EIF4G1Q04637 1599 aaKnown RBP21.32■■□□□ 1
LONP1-202ENST00000540670 HNRNPUL2Q1KMD3 747 aaKnown RBP21.26■□□□□ 0.99
LONP1-202ENST00000540670 PEG3Q9GZU2 1588 aa21.25■□□□□ 0.99
LONP1-202ENST00000540670 ATAD2BQ9ULI0 1458 aa21.21■□□□□ 0.99
LONP1-202ENST00000540670 CLSPNQ9HAW4 1339 aa21.2■□□□□ 0.98
LONP1-202ENST00000540670 BCANQ96GW7 911 aa21.2■□□□□ 0.98
LONP1-202ENST00000540670 UBTFP17480 764 aaKnown RBP21.16■□□□□ 0.98
LONP1-202ENST00000540670 ABCC8Q09428 1581 aa21.16■□□□□ 0.98
LONP1-202ENST00000540670 BAZ1BQ9UIG0 1483 aaKnown RBP21.11■□□□□ 0.97
LONP1-202ENST00000540670 RBM19Q9Y4C8 960 aaKnown RBP20.99■□□□□ 0.95
LONP1-202ENST00000540670 WRNQ14191 1432 aaPredicted RBP eCLIP20.95■□□□□ 0.94
LONP1-202ENST00000540670 FKBP8Q14318 412 aa20.93■□□□□ 0.94
LONP1-202ENST00000540670 CEP162Q5TB80 1403 aa20.92■□□□□ 0.94
LONP1-202ENST00000540670 SOGA1O94964 1423 aa20.89■□□□□ 0.94
LONP1-202ENST00000540670 NCAPD3P42695 1498 aa20.88■□□□□ 0.93
LONP1-202ENST00000540670 KCNH8Q96L42 1107 aa20.87■□□□□ 0.93
LONP1-202ENST00000540670 MSH5O43196 834 aa20.86■□□□□ 0.93
LONP1-202ENST00000540670 ITGAEP38570 1179 aa20.85■□□□□ 0.93
LONP1-202ENST00000540670 HMGXB3Q12766 1538 aa20.82■□□□□ 0.92
LONP1-202ENST00000540670 RUSC2Q8N2Y8 1516 aa20.82■□□□□ 0.92
LONP1-202ENST00000540670 SYNJ1O43426 1573 aa20.78■□□□□ 0.92
LONP1-202ENST00000540670 ERICH6Q7L0X2 663 aa20.73■□□□□ 0.91
LONP1-202ENST00000540670 NEFLP07196 543 aa20.68■□□□□ 0.9
LONP1-202ENST00000540670 APLP2Q06481 763 aa20.67■□□□□ 0.9
LONP1-202ENST00000540670 EEA1Q15075 1411 aa20.67■□□□□ 0.9
LONP1-202ENST00000540670 ANO8Q9HCE9 1232 aaPredicted RBP20.67■□□□□ 0.9
LONP1-202ENST00000540670 TNIKQ9UKE5 1360 aa20.64■□□□□ 0.9
LONP1-202ENST00000540670 DEKP35659 375 aaKnown RBP20.6■□□□□ 0.89
LONP1-202ENST00000540670 CC2D2AQ9P2K1 1620 aa20.59■□□□□ 0.89
LONP1-202ENST00000540670 CFTRP13569 1480 aa20.58■□□□□ 0.89
LONP1-202ENST00000540670 TOP2BQ02880 1626 aa20.56■□□□□ 0.88
LONP1-202ENST00000540670 TRIM52Q96A61 297 aa20.53■□□□□ 0.88
LONP1-202ENST00000540670 GOLGA3Q08378 1498 aa20.51■□□□□ 0.87
LONP1-202ENST00000540670 DHX57Q6P158 1386 aaKnown RBP20.5■□□□□ 0.87
LONP1-202ENST00000540670 BIVM-ERCC5R4GMW8 1640 aa20.49■□□□□ 0.87
LONP1-202ENST00000540670 FANCIQ9NVI1 1328 aa20.49■□□□□ 0.87
LONP1-202ENST00000540670 CUX1P39880 1505 aa20.49■□□□□ 0.87
LONP1-202ENST00000540670 HIRIP3Q9BW71 556 aaPredicted RBP20.47■□□□□ 0.87
LONP1-202ENST00000540670 CEP164Q9UPV0 1460 aa20.45■□□□□ 0.86
LONP1-202ENST00000540670 CADPSQ9ULU8 1353 aa20.45■□□□□ 0.86
LONP1-202ENST00000540670 SALL2Q9Y467 1007 aaPredicted RBP20.43■□□□□ 0.86
LONP1-202ENST00000540670 DDX10Q13206 875 aaKnown RBP20.43■□□□□ 0.86
LONP1-202ENST00000540670 KIF21BO75037 1637 aa20.41■□□□□ 0.86
LONP1-202ENST00000540670 IRX6P78412 446 aaPredicted RBP20.41■□□□□ 0.86
LONP1-202ENST00000540670 CDK11AQ9UQ88 783 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms