Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 HMGB2-201ENST00000296503 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.312e-24■□□□□ 10
EIF3DO15371 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.062e-24■□□□□ 10
EIF3DO15371 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.26■■□□□ 1.477e-9■□□□□ 10
EIF3DO15371 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.346e-11■□□□□ 10
EIF3DO15371 ALDOA-207ENST00000562302 502 ntTSL 1 (best)22.25■■□□□ 1.154e-6■□□□□ 10
EIF3DO15371 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.14e-6■□□□□ 10
EIF3DO15371 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.88■□□□□ 0.936e-11■□□□□ 10
EIF3DO15371 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.737e-9■□□□□ 10
EIF3DO15371 ALDOA-224ENST00000568435 935 ntTSL 1 (best)18.4■□□□□ 0.544e-6■□□□□ 10
EIF3DO15371 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.384e-6■□□□□ 10
EIF3DO15371 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.354e-6■□□□□ 10
EIF3DO15371 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.234e-6■□□□□ 10
EIF3DO15371 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.16■□□□□ 0.184e-6■□□□□ 10
EIF3DO15371 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.142e-7■□□□□ 10
EIF3DO15371 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.142e-7■□□□□ 10
EIF3DO15371 GPX2-202ENST00000553522 1134 ntTSL 1 (best)12.13□□□□□ -0.477e-9■□□□□ 10
EIF3DO15371 ALDOA-205ENST00000562168 666 ntTSL 311.62□□□□□ -0.554e-6■□□□□ 10
EIF3DO15371 GPX2-205ENST00000612794 1084 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.77e-9■□□□□ 10
EIF3DO15371 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.097e-9■□□□□ 10
EIF3DO15371 GPX2-204ENST00000557323 778 ntTSL 36.69□□□□□ -1.347e-9■□□□□ 10
EIF3DO15371 GPX2-203ENST00000557049 476 ntTSL 35.8□□□□□ -1.487e-9■□□□□ 10
EIF3DO15371 PKD1-229ENST00000564890 574 ntTSL 520.26■□□□□ 0.832e-8■□□□□ 10
EIF3DO15371 PKD1-228ENST00000564865 480 ntTSL 514.92□□□□□ -0.022e-8■□□□□ 10
EIF3DO15371 NDRG1-210ENST00000518480 558 ntTSL 418.37■□□□□ 0.533e-9■□□□□ 10
EIF3DO15371 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.313e-9■□□□□ 10
EIF3DO15371 NDRG1-225ENST00000522890 581 ntTSL 516.64■□□□□ 0.253e-9■□□□□ 10
EIF3DO15371 NDRG1-211ENST00000519228 729 ntTSL 416.18■□□□□ 0.183e-9■□□□□ 10
EIF3DO15371 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.84■□□□□ 0.133e-9■□□□□ 10
EIF3DO15371 NDRG1-206ENST00000518010 581 ntTSL 414.63□□□□□ -0.073e-9■□□□□ 10
EIF3DO15371 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC14.6□□□□□ -0.073e-9■□□□□ 10
EIF3DO15371 NDRG1-214ENST00000520230 582 ntTSL 414.38□□□□□ -0.113e-9■□□□□ 10
EIF3DO15371 NDRG1-213ENST00000519580 550 ntTSL 513.75□□□□□ -0.213e-9■□□□□ 10
EIF3DO15371 NDRG1-219ENST00000521544 709 ntTSL 513.75□□□□□ -0.213e-9■□□□□ 10
EIF3DO15371 NDRG1-204ENST00000517599 2918 ntTSL 213.18□□□□□ -0.33e-9■□□□□ 10
EIF3DO15371 NDRG1-221ENST00000522377 1103 ntTSL 513.17□□□□□ -0.33e-9■□□□□ 10
EIF3DO15371 NDRG1-207ENST00000518066 560 ntTSL 5 BASIC13.15□□□□□ -0.33e-9■□□□□ 10
EIF3DO15371 NDRG1-224ENST00000522738 530 ntTSL 512.11□□□□□ -0.473e-9■□□□□ 10
EIF3DO15371 NDRG1-201ENST00000323851 3014 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.493e-9■□□□□ 10
EIF3DO15371 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC11.96□□□□□ -0.53e-9■□□□□ 10
EIF3DO15371 NDRG1-215ENST00000520943 536 ntTSL 410.76□□□□□ -0.693e-9■□□□□ 10
EIF3DO15371 DST-209ENST00000449297 2108 ntTSL 59.9□□□□□ -0.828e-7■□□□□ 10
EIF3DO15371 NDRG1-227ENST00000523892 562 ntTSL 49.4□□□□□ -0.93e-9■□□□□ 10
EIF3DO15371 DST-231ENST00000523967 2904 ntTSL 26.94□□□□□ -1.38e-7■□□□□ 10
EIF3DO15371 DST-223ENST00000521104 3156 ntTSL 22.89□□□□□ -1.958e-7■□□□□ 10
EIF3DO15371 CTBP1-214ENST00000514495 564 ntTSL 229.78■■■□□ 2.365e-7■□□□□ 9.9
EIF3DO15371 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.34■■□□□ 1.975e-7■□□□□ 9.9
EIF3DO15371 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.575e-7■□□□□ 9.9
EIF3DO15371 CTBP1-217ENST00000515399 985 ntTSL 321.39■■□□□ 1.015e-7■□□□□ 9.9
EIF3DO15371 CTBP1-208ENST00000506180 843 ntTSL 519.65■□□□□ 0.745e-7■□□□□ 9.9
EIF3DO15371 CTBP1-213ENST00000514210 856 ntTSL 216.38■□□□□ 0.215e-7■□□□□ 9.9
EIF3DO15371 CTBP1-212ENST00000513420 704 ntTSL 315.77■□□□□ 0.125e-7■□□□□ 9.9
EIF3DO15371 MLXIPL-207ENST00000453275 690 ntTSL 521.3■■□□□ 14e-6■□□□□ 9.9
EIF3DO15371 MLXIPL-208ENST00000456640 706 ntTSL 518.82■□□□□ 0.64e-6■□□□□ 9.9
EIF3DO15371 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.95■□□□□ 0.144e-6■□□□□ 9.9
EIF3DO15371 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.124e-6■□□□□ 9.9
EIF3DO15371 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.82■□□□□ 0.124e-6■□□□□ 9.9
EIF3DO15371 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.76■□□□□ 0.114e-6■□□□□ 9.9
EIF3DO15371 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.064e-6■□□□□ 9.9
EIF3DO15371 MLXIPL-202ENST00000345114 3079 ntTSL 1 (best)14.62□□□□□ -0.074e-6■□□□□ 9.9
EIF3DO15371 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.372e-6■□□□□ 9.9
EIF3DO15371 HS3ST3B1-202ENST00000466596 2808 ntTSL 215.97■□□□□ 0.152e-6■□□□□ 9.9
EIF3DO15371 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.575e-14■□□□□ 9.9
EIF3DO15371 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.92■□□□□ 0.465e-14■□□□□ 9.9
EIF3DO15371 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.34■□□□□ 0.375e-14■□□□□ 9.9
EIF3DO15371 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.14■□□□□ 0.335e-14■□□□□ 9.9
EIF3DO15371 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.17■□□□□ 0.185e-14■□□□□ 9.9
EIF3DO15371 ASPSCR1-213ENST00000582355 1246 ntTSL 525.67■■□□□ 1.76e-10■□□□□ 9.9
EIF3DO15371 ASPSCR1-219ENST00000584454 1919 ntTSL 1 (best)25.09■■□□□ 1.616e-10■□□□□ 9.9
EIF3DO15371 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.54■■□□□ 1.526e-10■□□□□ 9.9
EIF3DO15371 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.56e-10■□□□□ 9.9
EIF3DO15371 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.486e-10■□□□□ 9.9
EIF3DO15371 ASPSCR1-216ENST00000583503 641 ntTSL 319.16■□□□□ 0.666e-10■□□□□ 9.9
EIF3DO15371 ANKRD17-210ENST00000561029 2717 ntTSL 523.27■■□□□ 1.329e-6■□□□□ 9.9
EIF3DO15371 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.95■□□□□ 0.789e-6■□□□□ 9.9
EIF3DO15371 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.319e-6■□□□□ 9.9
EIF3DO15371 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.469e-6■□□□□ 9.9
EIF3DO15371 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.129e-6■□□□□ 9.9
EIF3DO15371 ANKRD17-207ENST00000558247 8456 ntAPPRIS ALT2 TSL 1 (best)7.06□□□□□ -1.289e-6■□□□□ 9.9
EIF3DO15371 LRRC45-206ENST00000583383 840 ntTSL 326.5■■□□□ 1.839e-7■□□□□ 9.8
EIF3DO15371 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.62■■□□□ 1.379e-7■□□□□ 9.8
EIF3DO15371 ATP7B-216ENST00000635406 506 ntTSL 422.78■■□□□ 1.244e-6■□□□□ 9.8
EIF3DO15371 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.169e-7■□□□□ 9.8
EIF3DO15371 SEPT9-230ENST00000590586 572 ntTSL 421.99■■□□□ 1.119e-7■□□□□ 9.8
EIF3DO15371 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.089e-7■□□□□ 9.8
EIF3DO15371 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.66■■□□□ 1.069e-7■□□□□ 9.8
EIF3DO15371 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.989e-7■□□□□ 9.8
EIF3DO15371 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.55■□□□□ 0.889e-7■□□□□ 9.8
EIF3DO15371 ERF-203ENST00000593944 555 ntTSL 420.08■□□□□ 0.814e-8■□□□□ 9.8
EIF3DO15371 NDUFB10-203ENST00000565031 958 ntTSL 217.54■□□□□ 0.49e-7■□□□□ 9.8
EIF3DO15371 VAPA-204ENST00000577901 917 ntTSL 217.32■□□□□ 0.361e-10■□□□□ 9.8
EIF3DO15371 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.73■□□□□ 0.271e-10■□□□□ 9.8
EIF3DO15371 VAPA-209ENST00000585042 567 ntTSL 416.07■□□□□ 0.161e-10■□□□□ 9.8
EIF3DO15371 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.151e-10■□□□□ 9.8
EIF3DO15371 ZC3H15-206ENST00000477672 304 ntTSL 313.53□□□□□ -0.241e-10■□□□□ 9.8
EIF3DO15371 NDUFB10-205ENST00000570172 495 ntTSL 312.14□□□□□ -0.479e-7■□□□□ 9.8
EIF3DO15371 ZC3H15-203ENST00000437396 556 ntTSL 412.09□□□□□ -0.471e-10■□□□□ 9.8
EIF3DO15371 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.839e-7■□□□□ 9.8
EIF3DO15371 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.961e-10■□□□□ 9.8
EIF3DO15371 ERF-205ENST00000595941 227 ntTSL 48.99□□□□□ -0.974e-8■□□□□ 9.8
EIF3DO15371 ZC3H15-202ENST00000421536 1101 ntTSL 28.32□□□□□ -1.081e-10■□□□□ 9.8
Retrieved 100 of 4,069 protein–RNA pairs in 154 ms