RNA–Protein interactions for RNA: ENST00000564865.5

PKD1-228, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 480 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-228ENST00000564865 NISCHQ9Y2I1 1504 aa33.33■■■□□ 2.93
PKD1-228ENST00000564865 CCDC180Q9P1Z9 1646 aa29.6■■■□□ 2.33
PKD1-228ENST00000564865 ABCC9O60706 1549 aa29.15■■■□□ 2.26
PKD1-228ENST00000564865 DCAF8L2P0C7V8 631 aa28.06■■■□□ 2.08
PKD1-228ENST00000564865 RB1CC1Q8TDY2 1594 aa27.95■■■□□ 2.07
PKD1-228ENST00000564865 NACADO15069 1562 aa27.88■■■□□ 2.05
PKD1-228ENST00000564865 ZCCHC6Q5VYS8 1495 aaKnown RBP27.73■■■□□ 2.03
PKD1-228ENST00000564865 MYO15BQ96JP2 1530 aa27.64■■■□□ 2.02
PKD1-228ENST00000564865 DCAF1Q9Y4B6 1507 aa27.51■■■□□ 2
PKD1-228ENST00000564865 UNC13AQ9UPW8 1703 aa27.28■■□□□ 1.96
PKD1-228ENST00000564865 PABPN1Q86U42 306 aaKnown RBP eCLIP27.28■■□□□ 1.96
PKD1-228ENST00000564865 BICRAQ9NZM4 1560 aa27.09■■□□□ 1.93
PKD1-228ENST00000564865 SCRIBQ14160 1630 aa27.09■■□□□ 1.93
PKD1-228ENST00000564865 DNAJC5BQ9UF47 199 aa26.84■■□□□ 1.89
PKD1-228ENST00000564865 SHROOM4Q9ULL8 1493 aa26.74■■□□□ 1.87
PKD1-228ENST00000564865 EIF4G1Q04637 1599 aaKnown RBP26.4■■□□□ 1.82
PKD1-228ENST00000564865 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
PKD1-228ENST00000564865 CECR2Q9BXF3 1484 aa26.17■■□□□ 1.78
PKD1-228ENST00000564865 SMARCA4P51532 1647 aa25.87■■□□□ 1.73
PKD1-228ENST00000564865 BAZ1AQ9NRL2 1556 aaPredicted RBP25.83■■□□□ 1.73
PKD1-228ENST00000564865 ATAD2BQ9ULI0 1458 aa25.77■■□□□ 1.72
PKD1-228ENST00000564865 NCAPD3P42695 1498 aa25.74■■□□□ 1.71
PKD1-228ENST00000564865 MROH2BQ7Z745 1585 aa25.71■■□□□ 1.71
PKD1-228ENST00000564865 SMARCA2P51531 1590 aa25.7■■□□□ 1.71
PKD1-228ENST00000564865 HMGXB3Q12766 1538 aa25.58■■□□□ 1.68
PKD1-228ENST00000564865 PEG3Q9GZU2 1588 aa25.56■■□□□ 1.68
PKD1-228ENST00000564865 BAZ1BQ9UIG0 1483 aaKnown RBP25.56■■□□□ 1.68
PKD1-228ENST00000564865 WIZO95785 1651 aa25.43■■□□□ 1.66
PKD1-228ENST00000564865 RSF1Q96T23 1441 aaPredicted RBP25.39■■□□□ 1.66
PKD1-228ENST00000564865 NESP48681 1621 aa25.19■■□□□ 1.62
PKD1-228ENST00000564865 TOP2AP11388 1531 aaKnown RBP25.13■■□□□ 1.61
PKD1-228ENST00000564865 ERCC6Q03468 1493 aa25.13■■□□□ 1.61
PKD1-228ENST00000564865 LAMC3Q9Y6N6 1575 aa25.06■■□□□ 1.6
PKD1-228ENST00000564865 CADPSQ9ULU8 1353 aa25.03■■□□□ 1.6
PKD1-228ENST00000564865 PDS5BQ9NTI5 1447 aa24.94■■□□□ 1.58
PKD1-228ENST00000564865 CCDC88BA6NC98 1476 aa24.88■■□□□ 1.57
PKD1-228ENST00000564865 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
PKD1-228ENST00000564865 CFTRP13569 1480 aa24.83■■□□□ 1.57
PKD1-228ENST00000564865 SUPT5HO00267 1087 aaKnown RBP24.83■■□□□ 1.57
PKD1-228ENST00000564865 CUX2O14529 1486 aa24.83■■□□□ 1.56
PKD1-228ENST00000564865 THOC2Q8NI27 1593 aaKnown RBP24.76■■□□□ 1.55
PKD1-228ENST00000564865 FANCD2Q9BXW9 1451 aa24.73■■□□□ 1.55
PKD1-228ENST00000564865 CEP164Q9UPV0 1460 aa24.7■■□□□ 1.54
PKD1-228ENST00000564865 MRC2Q9UBG0 1479 aa24.67■■□□□ 1.54
PKD1-228ENST00000564865 PRDM2Q13029 1718 aa24.58■■□□□ 1.52
PKD1-228ENST00000564865 WDR62O43379 1518 aa24.56■■□□□ 1.52
PKD1-228ENST00000564865 URB2Q14146 1524 aaKnown RBP24.48■■□□□ 1.51
PKD1-228ENST00000564865 TOPBP1Q92547 1522 aa24.32■■□□□ 1.48
PKD1-228ENST00000564865 ABCC8Q09428 1581 aa24.29■■□□□ 1.48
PKD1-228ENST00000564865 DNMBPQ6XZF7 1577 aa24.27■■□□□ 1.48
PKD1-228ENST00000564865 DNAJC5Q9H3Z4 198 aa24.2■■□□□ 1.46
PKD1-228ENST00000564865 IFT140Q96RY7 1462 aa24.18■■□□□ 1.46
PKD1-228ENST00000564865 CUX1P39880 1505 aa24.11■■□□□ 1.45
PKD1-228ENST00000564865 POLA1P09884 1462 aaPredicted RBP24.11■■□□□ 1.45
PKD1-228ENST00000564865 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
PKD1-228ENST00000564865 FGD5Q6ZNL6 1462 aa24.06■■□□□ 1.44
PKD1-228ENST00000564865 RAD54L2Q9Y4B4 1467 aa24.06■■□□□ 1.44
PKD1-228ENST00000564865 SOGA1O94964 1423 aa24.05■■□□□ 1.44
PKD1-228ENST00000564865 TARBP1Q13395 1621 aaKnown RBP24.03■■□□□ 1.44
PKD1-228ENST00000564865 AQRO60306 1485 aaKnown RBP eCLIP23.99■■□□□ 1.43
PKD1-228ENST00000564865 EIF4G3O43432 1585 aaKnown RBP23.96■■□□□ 1.43
PKD1-228ENST00000564865 WRNQ14191 1432 aaPredicted RBP eCLIP23.95■■□□□ 1.42
PKD1-228ENST00000564865 TDRD9Q8NDG6 1382 aaKnown RBP23.94■■□□□ 1.42
PKD1-228ENST00000564865 SYNJ1O43426 1573 aa23.88■■□□□ 1.41
PKD1-228ENST00000564865 TOP2BQ02880 1626 aa23.87■■□□□ 1.41
PKD1-228ENST00000564865 OSCARQ8IYS5 282 aa23.86■■□□□ 1.41
PKD1-228ENST00000564865 BIVM-ERCC5R4GMW8 1640 aa23.85■■□□□ 1.41
PKD1-228ENST00000564865 WDR97A6NE52 1622 aa23.8■■□□□ 1.4
PKD1-228ENST00000564865 ABCA10Q8WWZ4 1543 aa23.79■■□□□ 1.4
PKD1-228ENST00000564865 FBLN2P98095 1184 aa23.78■■□□□ 1.4
PKD1-228ENST00000564865 GRIN2BQ13224 1484 aa23.75■■□□□ 1.39
PKD1-228ENST00000564865 GAPVD1Q14C86 1478 aa23.75■■□□□ 1.39
PKD1-228ENST00000564865 SNAPC4Q5SXM2 1469 aa23.74■■□□□ 1.39
PKD1-228ENST00000564865 ABCA5Q8WWZ7 1642 aa23.68■■□□□ 1.38
PKD1-228ENST00000564865 CHD1O14646 1710 aa23.67■■□□□ 1.38
PKD1-228ENST00000564865 CHMP7Q8WUX9 453 aaPredicted RBP23.67■■□□□ 1.38
PKD1-228ENST00000564865 PBRM1Q86U86 1689 aa23.67■■□□□ 1.38
PKD1-228ENST00000564865 MAGI1Q96QZ7 1491 aaPredicted RBP23.66■■□□□ 1.38
PKD1-228ENST00000564865 SYNJ2O15056 1496 aa23.58■■□□□ 1.37
PKD1-228ENST00000564865 ERICH3Q5RHP9 1530 aa23.49■■□□□ 1.35
PKD1-228ENST00000564865 TRIM41Q8WV44 630 aa23.47■■□□□ 1.35
PKD1-228ENST00000564865 ADAMTS12P58397 1594 aa23.47■■□□□ 1.35
PKD1-228ENST00000564865 FHAD1B1AJZ9 1412 aa23.46■■□□□ 1.35
PKD1-228ENST00000564865 KIF27Q86VH2 1401 aa23.46■■□□□ 1.35
PKD1-228ENST00000564865 RIMBP3CA6NJZ7 1639 aa23.44■■□□□ 1.34
PKD1-228ENST00000564865 RIMBP3BA6NNM3 1639 aa23.44■■□□□ 1.34
PKD1-228ENST00000564865 RIMBP3Q9UFD9 1639 aa23.44■■□□□ 1.34
PKD1-228ENST00000564865 GRIN2AQ12879 1464 aa23.43■■□□□ 1.34
PKD1-228ENST00000564865 ARHGEF11O15085 1522 aa23.43■■□□□ 1.34
PKD1-228ENST00000564865 CLASP1Q7Z460 1538 aa23.4■■□□□ 1.34
PKD1-228ENST00000564865 IGF1RP08069 1367 aa23.39■■□□□ 1.33
PKD1-228ENST00000564865 CEP170Q5SW79 1584 aa23.31■■□□□ 1.32
PKD1-228ENST00000564865 NUP160Q12769 1436 aa23.31■■□□□ 1.32
PKD1-228ENST00000564865 CYB5RLQ6IPT4 315 aa23.3■■□□□ 1.32
PKD1-228ENST00000564865 CUL7Q14999 1698 aa23.26■■□□□ 1.31
PKD1-228ENST00000564865 RUSC2Q8N2Y8 1516 aa23.26■■□□□ 1.31
PKD1-228ENST00000564865 CARMIL1Q5VZK9 1371 aa23.26■■□□□ 1.31
PKD1-228ENST00000564865 ARAP1Q96P48 1450 aa23.24■■□□□ 1.31
PKD1-228ENST00000564865 JPH4Q96JJ6 628 aa23.15■■□□□ 1.3
PKD1-228ENST00000564865 ERCC6L2Q5T890 1561 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms