Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 AC004840.1-201ENST00000636359 365 ntBASIC13.3□□□□□ -0.28
ACKR3P25106 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.3□□□□□ -0.28
ACKR3P25106 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.3□□□□□ -0.28
ACKR3P25106 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ACKR3P25106 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.3□□□□□ -0.28
ACKR3P25106 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ACKR3P25106 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.29□□□□□ -0.28
ACKR3P25106 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.29□□□□□ -0.28
ACKR3P25106 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ACKR3P25106 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.29□□□□□ -0.28
ACKR3P25106 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ACKR3P25106 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ACKR3P25106 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
ACKR3P25106 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
ACKR3P25106 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ACKR3P25106 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.29□□□□□ -0.28
ACKR3P25106 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.29□□□□□ -0.28
ACKR3P25106 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.29□□□□□ -0.28
ACKR3P25106 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ACKR3P25106 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.29□□□□□ -0.28
ACKR3P25106 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.29□□□□□ -0.28
ACKR3P25106 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 FAM8A3P-201ENST00000427218 844 ntBASIC13.29□□□□□ -0.28
ACKR3P25106 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.29□□□□□ -0.28
ACKR3P25106 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.29□□□□□ -0.28
ACKR3P25106 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.29□□□□□ -0.28
ACKR3P25106 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.29□□□□□ -0.28
ACKR3P25106 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.29□□□□□ -0.28
ACKR3P25106 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.29□□□□□ -0.28
ACKR3P25106 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.29□□□□□ -0.28
ACKR3P25106 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.29□□□□□ -0.28
ACKR3P25106 AL391069.4-201ENST00000609583 481 ntBASIC13.29□□□□□ -0.28
ACKR3P25106 AC106028.4-201ENST00000614509 607 ntBASIC13.29□□□□□ -0.28
ACKR3P25106 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.29□□□□□ -0.28
ACKR3P25106 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
ACKR3P25106 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
ACKR3P25106 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ACKR3P25106 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.29□□□□□ -0.28
ACKR3P25106 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.29□□□□□ -0.28
ACKR3P25106 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ACKR3P25106 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.29□□□□□ -0.28
ACKR3P25106 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACKR3P25106 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.29□□□□□ -0.28
ACKR3P25106 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
ACKR3P25106 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACKR3P25106 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ACKR3P25106 AC022144.1-201ENST00000602255 1580 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms