RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 DCAF8L2P0C7V8 631 aa24.52■■□□□ 1.52
SPRED1-201ENST00000299084 PELP1Q8IZL8 1130 aaKnown RBP23.29■■□□□ 1.32
SPRED1-201ENST00000299084 FAM9AQ8IZU1 332 aaPredicted RBP23.02■■□□□ 1.28
SPRED1-201ENST00000299084 ERICH6Q7L0X2 663 aa22.64■■□□□ 1.22
SPRED1-201ENST00000299084 APLP2Q06481 763 aa22.61■■□□□ 1.21
SPRED1-201ENST00000299084 EHMT2Q96KQ7 1210 aa22.54■■□□□ 1.2
SPRED1-201ENST00000299084 SUPT5HO00267 1087 aaKnown RBP22.41■■□□□ 1.18
SPRED1-201ENST00000299084 CCER1Q8TC90 406 aaPredicted RBP22.28■■□□□ 1.16
SPRED1-201ENST00000299084 MYT1Q01538 1121 aa22.06■■□□□ 1.12
SPRED1-201ENST00000299084 NISCHQ9Y2I1 1504 aa21.95■■□□□ 1.1
SPRED1-201ENST00000299084 ATP1B4Q9UN42 357 aaPredicted RBP21.92■■□□□ 1.1
SPRED1-201ENST00000299084 TTBK1Q5TCY1 1321 aaPredicted RBP21.76■■□□□ 1.07
SPRED1-201ENST00000299084 SHROOM4Q9ULL8 1493 aa21.71■■□□□ 1.07
SPRED1-201ENST00000299084 RANGAP1P46060 587 aaPredicted RBP21.67■■□□□ 1.06
SPRED1-201ENST00000299084 MYT1LQ9UL68 1186 aa21.67■■□□□ 1.06
SPRED1-201ENST00000299084 CENPBP07199 599 aaPredicted RBP21.61■■□□□ 1.05
SPRED1-201ENST00000299084 NEFLP07196 543 aa21.55■■□□□ 1.04
SPRED1-201ENST00000299084 DAXXQ9UER7 740 aaPredicted RBP21.53■■□□□ 1.04
SPRED1-201ENST00000299084 PCGF6Q9BYE7 350 aa21.36■■□□□ 1.01
SPRED1-201ENST00000299084 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
SPRED1-201ENST00000299084 YTHDC1Q96MU7 727 aaKnown RBP21.25■□□□□ 0.99
SPRED1-201ENST00000299084 SLC4A1APQ9BWU0 796 aaKnown RBP21.21■□□□□ 0.99
SPRED1-201ENST00000299084 POLR3GLQ9BT43 218 aa21.12■□□□□ 0.97
SPRED1-201ENST00000299084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.08■□□□□ 0.96
SPRED1-201ENST00000299084 HNRNPUL2Q1KMD3 747 aaKnown RBP21.08■□□□□ 0.96
SPRED1-201ENST00000299084 UBTFP17480 764 aaKnown RBP21.04■□□□□ 0.96
SPRED1-201ENST00000299084 ZEB1P37275 1124 aaPredicted RBP20.91■□□□□ 0.94
SPRED1-201ENST00000299084 ZNF316A6NFI3 1004 aaPredicted RBP20.86■□□□□ 0.93
SPRED1-201ENST00000299084 CLSPNQ9HAW4 1339 aa20.85■□□□□ 0.93
SPRED1-201ENST00000299084 CNGB1Q14028 1251 aaPredicted RBP20.77■□□□□ 0.92
SPRED1-201ENST00000299084 TRIM41Q8WV44 630 aa20.76■□□□□ 0.91
SPRED1-201ENST00000299084 SLC24A1O60721 1099 aa20.74■□□□□ 0.91
SPRED1-201ENST00000299084 RTL5Q5HYW3 569 aaPredicted RBP20.74■□□□□ 0.91
SPRED1-201ENST00000299084 ZBTB47Q9UFB7 747 aaPredicted RBP20.7■□□□□ 0.9
SPRED1-201ENST00000299084 ITGAEP38570 1179 aa20.57■□□□□ 0.88
SPRED1-201ENST00000299084 BCANQ96GW7 911 aa20.5■□□□□ 0.87
SPRED1-201ENST00000299084 BCL11AQ9H165 835 aa20.37■□□□□ 0.85
SPRED1-201ENST00000299084 NEFMP07197 916 aa20.32■□□□□ 0.84
SPRED1-201ENST00000299084 PPARGC1BQ86YN6 1023 aaKnown RBP20.24■□□□□ 0.83
SPRED1-201ENST00000299084 CANXP27824 592 aaKnown RBP20.17■□□□□ 0.82
SPRED1-201ENST00000299084 ESF1Q9H501 851 aaKnown RBP20.1■□□□□ 0.81
SPRED1-201ENST00000299084 CDK11BP21127 795 aaKnown RBP20.07■□□□□ 0.8
SPRED1-201ENST00000299084 CDK11AQ9UQ88 783 aaPredicted RBP20.07■□□□□ 0.8
SPRED1-201ENST00000299084 TRIM52Q96A61 297 aa20.06■□□□□ 0.8
SPRED1-201ENST00000299084 EIF5BO60841 1220 aaKnown RBP20.04■□□□□ 0.8
SPRED1-201ENST00000299084 PLPPR3Q6T4P5 718 aa19.99■□□□□ 0.79
SPRED1-201ENST00000299084 FAM50AQ14320 339 aaKnown RBP19.95■□□□□ 0.78
SPRED1-201ENST00000299084 ZNF326Q5BKZ1 582 aaKnown RBP19.92■□□□□ 0.78
SPRED1-201ENST00000299084 ANP32BQ92688 251 aaKnown RBP19.91■□□□□ 0.78
SPRED1-201ENST00000299084 FBLN2P98095 1184 aa19.89■□□□□ 0.77
SPRED1-201ENST00000299084 A0A0G2JS52 829 aa19.88■□□□□ 0.77
SPRED1-201ENST00000299084 STAG3Q9UJ98 1225 aa19.85■□□□□ 0.77
SPRED1-201ENST00000299084 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
SPRED1-201ENST00000299084 HSP90AA1P07900 732 aaKnown RBP19.8■□□□□ 0.76
SPRED1-201ENST00000299084 GLIPR1L2Q4G1C9 344 aa19.79■□□□□ 0.76
SPRED1-201ENST00000299084 HRCP23327 699 aa19.77■□□□□ 0.76
SPRED1-201ENST00000299084 NPM2Q86SE8 214 aaKnown RBP19.74■□□□□ 0.75
SPRED1-201ENST00000299084 TRIM26Q12899 539 aaPredicted RBP19.73■□□□□ 0.75
SPRED1-201ENST00000299084 NEUROD1Q13562 356 aa19.72■□□□□ 0.75
SPRED1-201ENST00000299084 ANP32CO43423 234 aa19.63■□□□□ 0.73
SPRED1-201ENST00000299084 ANP32AP39687 249 aaKnown RBP19.6■□□□□ 0.73
SPRED1-201ENST00000299084 TULP1O00294 542 aaPredicted RBP19.58■□□□□ 0.72
SPRED1-201ENST00000299084 CHGAP10645 457 aaKnown RBP19.55■□□□□ 0.72
SPRED1-201ENST00000299084 UPF2Q9HAU5 1272 aaKnown RBP19.55■□□□□ 0.72
SPRED1-201ENST00000299084 DIEXFQ68CQ4 756 aaKnown RBP19.54■□□□□ 0.72
SPRED1-201ENST00000299084 NPM1P06748 294 aaKnown RBP eCLIP19.51■□□□□ 0.71
SPRED1-201ENST00000299084 ARXQ96QS3 562 aa19.48■□□□□ 0.71
SPRED1-201ENST00000299084 HAP1P54257 671 aaPredicted RBP19.44■□□□□ 0.7
SPRED1-201ENST00000299084 NCBP3Q53F19 620 aaKnown RBP19.44■□□□□ 0.7
SPRED1-201ENST00000299084 ZBTB7CA1YPR0 619 aa19.41■□□□□ 0.7
SPRED1-201ENST00000299084 ZNF777Q9ULD5 760 aaPredicted RBP19.38■□□□□ 0.69
SPRED1-201ENST00000299084 NPHP1O15259 732 aa19.38■□□□□ 0.69
SPRED1-201ENST00000299084 PLEKHG5O94827 1062 aa19.37■□□□□ 0.69
SPRED1-201ENST00000299084 C14orf37Q86TY3 774 aa19.37■□□□□ 0.69
SPRED1-201ENST00000299084 GTF3C3Q9Y5Q9 886 aa19.37■□□□□ 0.69
SPRED1-201ENST00000299084 ARID3CA6NKF2 412 aa19.31■□□□□ 0.68
SPRED1-201ENST00000299084 MYH16Q9H6N6 1097 aa19.29■□□□□ 0.68
SPRED1-201ENST00000299084 LOC105371045A0A1W2PR82 267 aa19.24■□□□□ 0.67
SPRED1-201ENST00000299084 ZRSR1Q15695 479 aaKnown RBP19.23■□□□□ 0.67
SPRED1-201ENST00000299084 NBR1Q14596 966 aa19.2■□□□□ 0.66
SPRED1-201ENST00000299084 TNNT2P45379 298 aaPredicted RBP19.19■□□□□ 0.66
SPRED1-201ENST00000299084 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.19■□□□□ 0.66
SPRED1-201ENST00000299084 NCLP19338 710 aaKnown RBP19.17■□□□□ 0.66
SPRED1-201ENST00000299084 CLSTN1O94985 981 aa19.16■□□□□ 0.66
SPRED1-201ENST00000299084 PRM3Q9NNZ6 103 aa19.08■□□□□ 0.65
SPRED1-201ENST00000299084 PPP1R15AO75807 674 aaPredicted RBP19.08■□□□□ 0.64
SPRED1-201ENST00000299084 TRIM44Q96DX7 344 aaPredicted RBP19.07■□□□□ 0.64
SPRED1-201ENST00000299084 WDR43Q15061 677 aaKnown RBP eCLIP19.07■□□□□ 0.64
SPRED1-201ENST00000299084 P3H3Q8IVL6 736 aa19.05■□□□□ 0.64
SPRED1-201ENST00000299084 PABPN1Q86U42 306 aaKnown RBP eCLIP19.05■□□□□ 0.64
SPRED1-201ENST00000299084 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.04■□□□□ 0.64
SPRED1-201ENST00000299084 GOLGA2Q08379 1002 aa19.04■□□□□ 0.64
SPRED1-201ENST00000299084 ARID4BQ4LE39 1312 aaPredicted RBP19.03■□□□□ 0.64
SPRED1-201ENST00000299084 KRI1Q8N9T8 703 aaKnown RBP19.03■□□□□ 0.64
SPRED1-201ENST00000299084 SALL2Q9Y467 1007 aaPredicted RBP19.02■□□□□ 0.63
SPRED1-201ENST00000299084 AMER1Q5JTC6 1135 aaPredicted RBP18.99■□□□□ 0.63
SPRED1-201ENST00000299084 ABCC9O60706 1549 aa18.98■□□□□ 0.63
SPRED1-201ENST00000299084 DNTTIP2Q5QJE6 756 aaKnown RBP18.96■□□□□ 0.63
SPRED1-201ENST00000299084 TAOK2Q9UL54 1235 aa18.96■□□□□ 0.63
SPRED1-201ENST00000299084 CASC1Q6TDU7 716 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms