RNA–Protein interactions for RNA: ENST00000557894.5

IRF9-203, Transcript of interferon regulatory factor 9, humanhuman

TSL 5 BASIC

Gene IRF9, Length 1,391 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-203ENST00000557894 NISCHQ9Y2I1 1504 aa41.1■■■■■ 4.17
IRF9-203ENST00000557894 ABCC9O60706 1549 aa37.26■■■■□ 3.56
IRF9-203ENST00000557894 CCDC180Q9P1Z9 1646 aa36.95■■■■□ 3.51
IRF9-203ENST00000557894 RB1CC1Q8TDY2 1594 aa35.3■■■■□ 3.24
IRF9-203ENST00000557894 DNAJC5BQ9UF47 199 aa35.09■■■■□ 3.21
IRF9-203ENST00000557894 DCAF8L2P0C7V8 631 aa34.99■■■■□ 3.19
IRF9-203ENST00000557894 NACADO15069 1562 aa34.97■■■■□ 3.19
IRF9-203ENST00000557894 PABPN1Q86U42 306 aaKnown RBP eCLIP34.69■■■■□ 3.14
IRF9-203ENST00000557894 UNC13AQ9UPW8 1703 aa34.56■■■■□ 3.12
IRF9-203ENST00000557894 MYO15BQ96JP2 1530 aa34.33■■■■□ 3.09
IRF9-203ENST00000557894 BICRAQ9NZM4 1560 aa34.27■■■■□ 3.08
IRF9-203ENST00000557894 ZCCHC6Q5VYS8 1495 aaKnown RBP34■■■■□ 3.03
IRF9-203ENST00000557894 DCAF1Q9Y4B6 1507 aa33.85■■■■□ 3.01
IRF9-203ENST00000557894 SCRIBQ14160 1630 aa33.78■■■■□ 3
IRF9-203ENST00000557894 SHROOM4Q9ULL8 1493 aa33.67■■■□□ 2.98
IRF9-203ENST00000557894 CC2D2AQ9P2K1 1620 aa33.61■■■□□ 2.97
IRF9-203ENST00000557894 CECR2Q9BXF3 1484 aa33.54■■■□□ 2.96
IRF9-203ENST00000557894 EIF4G1Q04637 1599 aaKnown RBP33.46■■■□□ 2.95
IRF9-203ENST00000557894 DNAJC5Q9H3Z4 198 aa32.32■■■□□ 2.76
IRF9-203ENST00000557894 NCAPD3P42695 1498 aa32.26■■■□□ 2.76
IRF9-203ENST00000557894 ERCC6Q03468 1493 aa32.19■■■□□ 2.74
IRF9-203ENST00000557894 ATAD2BQ9ULI0 1458 aa32.18■■■□□ 2.74
IRF9-203ENST00000557894 SMARCA4P51532 1647 aa32.14■■■□□ 2.73
IRF9-203ENST00000557894 SMARCA2P51531 1590 aa32.09■■■□□ 2.73
IRF9-203ENST00000557894 CUX2O14529 1486 aa32.09■■■□□ 2.73
IRF9-203ENST00000557894 HMGXB3Q12766 1538 aa32.03■■■□□ 2.72
IRF9-203ENST00000557894 NESP48681 1621 aa31.95■■■□□ 2.7
IRF9-203ENST00000557894 BAZ1AQ9NRL2 1556 aaPredicted RBP31.92■■■□□ 2.7
IRF9-203ENST00000557894 BAZ1BQ9UIG0 1483 aaKnown RBP31.91■■■□□ 2.7
IRF9-203ENST00000557894 PEG3Q9GZU2 1588 aa31.73■■■□□ 2.67
IRF9-203ENST00000557894 MROH2BQ7Z745 1585 aa31.71■■■□□ 2.67
IRF9-203ENST00000557894 LAMC3Q9Y6N6 1575 aa31.61■■■□□ 2.65
IRF9-203ENST00000557894 THOC2Q8NI27 1593 aaKnown RBP31.6■■■□□ 2.65
IRF9-203ENST00000557894 KIF21AQ7Z4S6 1674 aa31.54■■■□□ 2.64
IRF9-203ENST00000557894 PDS5BQ9NTI5 1447 aa31.45■■■□□ 2.63
IRF9-203ENST00000557894 WIZO95785 1651 aa31.37■■■□□ 2.61
IRF9-203ENST00000557894 CADPSQ9ULU8 1353 aa31.32■■■□□ 2.6
IRF9-203ENST00000557894 MRC2Q9UBG0 1479 aa31.2■■■□□ 2.58
IRF9-203ENST00000557894 WDR62O43379 1518 aa31.1■■■□□ 2.57
IRF9-203ENST00000557894 CEP164Q9UPV0 1460 aa31.05■■■□□ 2.56
IRF9-203ENST00000557894 FANCD2Q9BXW9 1451 aa31■■■□□ 2.55
IRF9-203ENST00000557894 TRIM41Q8WV44 630 aa30.98■■■□□ 2.55
IRF9-203ENST00000557894 RSF1Q96T23 1441 aaPredicted RBP30.95■■■□□ 2.54
IRF9-203ENST00000557894 CFTRP13569 1480 aa30.9■■■□□ 2.54
IRF9-203ENST00000557894 TOP2AP11388 1531 aaKnown RBP30.89■■■□□ 2.53
IRF9-203ENST00000557894 URB2Q14146 1524 aaKnown RBP30.75■■■□□ 2.51
IRF9-203ENST00000557894 OSCARQ8IYS5 282 aa30.66■■■□□ 2.5
IRF9-203ENST00000557894 PRDM2Q13029 1718 aa30.64■■■□□ 2.5
IRF9-203ENST00000557894 CCDC88BA6NC98 1476 aa30.56■■■□□ 2.48
IRF9-203ENST00000557894 ZNF608Q9ULD9 1512 aaPredicted RBP30.43■■■□□ 2.46
IRF9-203ENST00000557894 IFT140Q96RY7 1462 aa30.4■■■□□ 2.46
IRF9-203ENST00000557894 TOPBP1Q92547 1522 aa30.38■■■□□ 2.45
IRF9-203ENST00000557894 RIMBP3CA6NJZ7 1639 aa30.3■■■□□ 2.44
IRF9-203ENST00000557894 RIMBP3BA6NNM3 1639 aa30.3■■■□□ 2.44
IRF9-203ENST00000557894 RIMBP3Q9UFD9 1639 aa30.3■■■□□ 2.44
IRF9-203ENST00000557894 EIF4G3O43432 1585 aaKnown RBP30.25■■■□□ 2.43
IRF9-203ENST00000557894 ABCC8Q09428 1581 aa30.25■■■□□ 2.43
IRF9-203ENST00000557894 DNMBPQ6XZF7 1577 aa30.25■■■□□ 2.43
IRF9-203ENST00000557894 ARHGEF11O15085 1522 aa30.15■■■□□ 2.42
IRF9-203ENST00000557894 AQRO60306 1485 aaKnown RBP eCLIP30.15■■■□□ 2.423e-7■■■■■ 33.8
IRF9-203ENST00000557894 TARBP1Q13395 1621 aaKnown RBP30.11■■■□□ 2.41
IRF9-203ENST00000557894 CHD1O14646 1710 aa30.1■■■□□ 2.41
IRF9-203ENST00000557894 FBLN2P98095 1184 aa30.08■■■□□ 2.41
IRF9-203ENST00000557894 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
IRF9-203ENST00000557894 CYB5RLQ6IPT4 315 aa30.02■■■□□ 2.4
IRF9-203ENST00000557894 RAD54L2Q9Y4B4 1467 aa30■■■□□ 2.39
IRF9-203ENST00000557894 SOGA1O94964 1423 aa29.94■■■□□ 2.38
IRF9-203ENST00000557894 TDRD9Q8NDG6 1382 aaKnown RBP29.94■■■□□ 2.38
IRF9-203ENST00000557894 FGD5Q6ZNL6 1462 aa29.87■■■□□ 2.37
IRF9-203ENST00000557894 ARAP1Q96P48 1450 aa29.84■■■□□ 2.37
IRF9-203ENST00000557894 SNAPC4Q5SXM2 1469 aa29.82■■■□□ 2.36
IRF9-203ENST00000557894 TRHP20396 242 aaPredicted RBP29.8■■■□□ 2.36
IRF9-203ENST00000557894 CUX1P39880 1505 aa29.8■■■□□ 2.36
IRF9-203ENST00000557894 CHMP7Q8WUX9 453 aaPredicted RBP29.76■■■□□ 2.35
IRF9-203ENST00000557894 WDR97A6NE52 1622 aa29.73■■■□□ 2.35
IRF9-203ENST00000557894 GRIN2BQ13224 1484 aa29.68■■■□□ 2.34
IRF9-203ENST00000557894 MAGI1Q96QZ7 1491 aaPredicted RBP29.67■■■□□ 2.34
IRF9-203ENST00000557894 SYNJ1O43426 1573 aa29.67■■■□□ 2.34
IRF9-203ENST00000557894 CLASP1Q7Z460 1538 aa29.66■■■□□ 2.34
IRF9-203ENST00000557894 SUPT5HO00267 1087 aaKnown RBP29.62■■■□□ 2.33
IRF9-203ENST00000557894 PBRM1Q86U86 1689 aa29.61■■■□□ 2.33
IRF9-203ENST00000557894 SYNJ2O15056 1496 aa29.6■■■□□ 2.33
IRF9-203ENST00000557894 GAPVD1Q14C86 1478 aa29.57■■■□□ 2.32
IRF9-203ENST00000557894 ABCA10Q8WWZ4 1543 aa29.47■■■□□ 2.31
IRF9-203ENST00000557894 ABCA5Q8WWZ7 1642 aa29.46■■■□□ 2.31
IRF9-203ENST00000557894 WRNQ14191 1432 aaPredicted RBP eCLIP29.35■■■□□ 2.29
IRF9-203ENST00000557894 GRIN2AQ12879 1464 aa29.3■■■□□ 2.28
IRF9-203ENST00000557894 ADAMTS12P58397 1594 aa29.26■■■□□ 2.27
IRF9-203ENST00000557894 ERCC6L2Q5T890 1561 aa29.26■■■□□ 2.27
IRF9-203ENST00000557894 TOP2BQ02880 1626 aa29.25■■■□□ 2.27
IRF9-203ENST00000557894 BIVM-ERCC5R4GMW8 1640 aa29.25■■■□□ 2.27
IRF9-203ENST00000557894 CEP170Q5SW79 1584 aa29.23■■■□□ 2.27
IRF9-203ENST00000557894 NUP160Q12769 1436 aa29.16■■■□□ 2.26
IRF9-203ENST00000557894 FHAD1B1AJZ9 1412 aa29.15■■■□□ 2.26
IRF9-203ENST00000557894 ERICH3Q5RHP9 1530 aa29.1■■■□□ 2.25
IRF9-203ENST00000557894 SHROOM2Q13796 1616 aa29.07■■■□□ 2.24
IRF9-203ENST00000557894 AEBP2Q6ZN18 517 aaPredicted RBP29.07■■■□□ 2.24
IRF9-203ENST00000557894 PRG4Q92954 1404 aaPredicted RBP28.98■■■□□ 2.23
IRF9-203ENST00000557894 JPH4Q96JJ6 628 aa28.93■■■□□ 2.22
IRF9-203ENST00000557894 RUSC2Q8N2Y8 1516 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms