RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 DCAF8L2P0C7V8 631 aa27.32■■□□□ 1.96
PCDHB13-201ENST00000341948 NISCHQ9Y2I1 1504 aa26.86■■□□□ 1.89
PCDHB13-201ENST00000341948 SUPT5HO00267 1087 aaKnown RBP25.47■■□□□ 1.67
PCDHB13-201ENST00000341948 SHROOM4Q9ULL8 1493 aa25.33■■□□□ 1.65
PCDHB13-201ENST00000341948 EHMT2Q96KQ7 1210 aa24.45■■□□□ 1.51
PCDHB13-201ENST00000341948 FAM9AQ8IZU1 332 aaPredicted RBP23.98■■□□□ 1.43
PCDHB13-201ENST00000341948 APLP2Q06481 763 aa23.89■■□□□ 1.41
PCDHB13-201ENST00000341948 TRIM41Q8WV44 630 aa23.65■■□□□ 1.38
PCDHB13-201ENST00000341948 RANGAP1P46060 587 aaPredicted RBP23.6■■□□□ 1.37
PCDHB13-201ENST00000341948 TTBK1Q5TCY1 1321 aaPredicted RBP23.5■■□□□ 1.35
PCDHB13-201ENST00000341948 ABCC9O60706 1549 aa23.48■■□□□ 1.35
PCDHB13-201ENST00000341948 ATP1B4Q9UN42 357 aaPredicted RBP23.37■■□□□ 1.33
PCDHB13-201ENST00000341948 UBTFP17480 764 aaKnown RBP23.33■■□□□ 1.33
PCDHB13-201ENST00000341948 PABPN1Q86U42 306 aaKnown RBP eCLIP23.22■■□□□ 1.31
PCDHB13-201ENST00000341948 PCGF6Q9BYE7 350 aa23.18■■□□□ 1.3
PCDHB13-201ENST00000341948 PELP1Q8IZL8 1130 aaKnown RBP22.89■■□□□ 1.26
PCDHB13-201ENST00000341948 ZEB1P37275 1124 aaPredicted RBP22.77■■□□□ 1.24
PCDHB13-201ENST00000341948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.74■■□□□ 1.23
PCDHB13-201ENST00000341948 HNRNPUL2Q1KMD3 747 aaKnown RBP22.74■■□□□ 1.23
PCDHB13-201ENST00000341948 CCER1Q8TC90 406 aaPredicted RBP22.73■■□□□ 1.23
PCDHB13-201ENST00000341948 PPARGC1BQ86YN6 1023 aaKnown RBP22.7■■□□□ 1.22
PCDHB13-201ENST00000341948 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
PCDHB13-201ENST00000341948 MYT1LQ9UL68 1186 aa22.57■■□□□ 1.2
PCDHB13-201ENST00000341948 LOC105371045A0A1W2PR82 267 aa22.52■■□□□ 1.19
PCDHB13-201ENST00000341948 ITGAEP38570 1179 aa22.44■■□□□ 1.18
PCDHB13-201ENST00000341948 CENPBP07199 599 aaPredicted RBP22.43■■□□□ 1.18
PCDHB13-201ENST00000341948 TRIM26Q12899 539 aaPredicted RBP22.36■■□□□ 1.17
PCDHB13-201ENST00000341948 FBLN2P98095 1184 aa22.28■■□□□ 1.16
PCDHB13-201ENST00000341948 SCRIBQ14160 1630 aa22.27■■□□□ 1.16
PCDHB13-201ENST00000341948 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
PCDHB13-201ENST00000341948 CCDC180Q9P1Z9 1646 aa22.15■■□□□ 1.14
PCDHB13-201ENST00000341948 HRCP23327 699 aa22.02■■□□□ 1.11
PCDHB13-201ENST00000341948 YTHDC1Q96MU7 727 aaKnown RBP21.99■■□□□ 1.11
PCDHB13-201ENST00000341948 FAM50AQ14320 339 aaKnown RBP21.97■■□□□ 1.11
PCDHB13-201ENST00000341948 POLR3GLQ9BT43 218 aa21.95■■□□□ 1.1
PCDHB13-201ENST00000341948 NEFLP07196 543 aa21.93■■□□□ 1.1
PCDHB13-201ENST00000341948 RB1CC1Q8TDY2 1594 aa21.89■■□□□ 1.09
PCDHB13-201ENST00000341948 P3H3Q8IVL6 736 aa21.86■■□□□ 1.09
PCDHB13-201ENST00000341948 CSRNP3Q8WYN3 585 aa21.86■■□□□ 1.09
PCDHB13-201ENST00000341948 ERICH6Q7L0X2 663 aa21.84■■□□□ 1.09
PCDHB13-201ENST00000341948 ARID3CA6NKF2 412 aa21.81■■□□□ 1.08
PCDHB13-201ENST00000341948 TRIM52Q96A61 297 aa21.79■■□□□ 1.08
PCDHB13-201ENST00000341948 CNGB1Q14028 1251 aaPredicted RBP21.71■■□□□ 1.07
PCDHB13-201ENST00000341948 NACADO15069 1562 aa21.66■■□□□ 1.06
PCDHB13-201ENST00000341948 SLC4A1APQ9BWU0 796 aaKnown RBP21.65■■□□□ 1.06
PCDHB13-201ENST00000341948 CDK11AQ9UQ88 783 aaPredicted RBP21.57■■□□□ 1.04
PCDHB13-201ENST00000341948 ZNF777Q9ULD5 760 aaPredicted RBP21.55■■□□□ 1.04
PCDHB13-201ENST00000341948 NEUROD1Q13562 356 aa21.55■■□□□ 1.04
PCDHB13-201ENST00000341948 NPM1P06748 294 aaKnown RBP eCLIP21.51■■□□□ 1.03
PCDHB13-201ENST00000341948 ZNF326Q5BKZ1 582 aaKnown RBP21.46■■□□□ 1.03
PCDHB13-201ENST00000341948 CHMP7Q8WUX9 453 aaPredicted RBP21.45■■□□□ 1.02
PCDHB13-201ENST00000341948 DIEXFQ68CQ4 756 aaKnown RBP21.4■■□□□ 1.02
PCDHB13-201ENST00000341948 RSF1Q96T23 1441 aaPredicted RBP21.4■■□□□ 1.02
PCDHB13-201ENST00000341948 BAZ1BQ9UIG0 1483 aaKnown RBP21.36■■□□□ 1.01
PCDHB13-201ENST00000341948 BCANQ96GW7 911 aa21.32■■□□□ 1
PCDHB13-201ENST00000341948 ESF1Q9H501 851 aaKnown RBP21.3■■□□□ 1
PCDHB13-201ENST00000341948 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
PCDHB13-201ENST00000341948 PLPPR3Q6T4P5 718 aa21.17■□□□□ 0.98
PCDHB13-201ENST00000341948 ERCC6Q03468 1493 aa21.16■□□□□ 0.98
PCDHB13-201ENST00000341948 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.97
PCDHB13-201ENST00000341948 BAZ1AQ9NRL2 1556 aaPredicted RBP21.13■□□□□ 0.97
PCDHB13-201ENST00000341948 WRNQ14191 1432 aaPredicted RBP eCLIP21.12■□□□□ 0.97
PCDHB13-201ENST00000341948 CHGAP10645 457 aaKnown RBP21.11■□□□□ 0.97
PCDHB13-201ENST00000341948 DAXXQ9UER7 740 aaPredicted RBP21.1■□□□□ 0.97
PCDHB13-201ENST00000341948 STAG3Q9UJ98 1225 aa21.1■□□□□ 0.97
PCDHB13-201ENST00000341948 CHIC2Q9UKJ5 165 aa21.08■□□□□ 0.97
PCDHB13-201ENST00000341948 MTUS2Q5JR59 1369 aa21.06■□□□□ 0.96
PCDHB13-201ENST00000341948 TSPY4P0CV99 314 aa21.05■□□□□ 0.96
PCDHB13-201ENST00000341948 TSPY10P0CW01 314 aa21.05■□□□□ 0.96
PCDHB13-201ENST00000341948 KCNH8Q96L42 1107 aa21.04■□□□□ 0.96
PCDHB13-201ENST00000341948 ZNF316A6NFI3 1004 aaPredicted RBP21.03■□□□□ 0.96
PCDHB13-201ENST00000341948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.03■□□□□ 0.96
PCDHB13-201ENST00000341948 ANP32CO43423 234 aa21.01■□□□□ 0.95
PCDHB13-201ENST00000341948 MYT1Q01538 1121 aa21.01■□□□□ 0.95
PCDHB13-201ENST00000341948 CLIP1P30622 1438 aa21■□□□□ 0.95
PCDHB13-201ENST00000341948 KIF27Q86VH2 1401 aa20.98■□□□□ 0.95
PCDHB13-201ENST00000341948 PLEKHD1A6NEE1 506 aa20.97■□□□□ 0.95
PCDHB13-201ENST00000341948 EEA1Q15075 1411 aa20.95■□□□□ 0.94
PCDHB13-201ENST00000341948 TONSLQ96HA7 1378 aa20.88■□□□□ 0.93
PCDHB13-201ENST00000341948 GOLGA3Q08378 1498 aa20.87■□□□□ 0.93
PCDHB13-201ENST00000341948 SLC24A1O60721 1099 aa20.85■□□□□ 0.93
PCDHB13-201ENST00000341948 NEFMP07197 916 aa20.82■□□□□ 0.92
PCDHB13-201ENST00000341948 CLSPNQ9HAW4 1339 aa20.82■□□□□ 0.92
PCDHB13-201ENST00000341948 MROH2BQ7Z745 1585 aa20.81■□□□□ 0.92
PCDHB13-201ENST00000341948 GTF3C3Q9Y5Q9 886 aa20.77■□□□□ 0.92
PCDHB13-201ENST00000341948 RRP7BPQ9NSQ0 103 aa20.77■□□□□ 0.92
PCDHB13-201ENST00000341948 SMARCA2P51531 1590 aa20.76■□□□□ 0.91
PCDHB13-201ENST00000341948 CEP162Q5TB80 1403 aa20.76■□□□□ 0.91
PCDHB13-201ENST00000341948 PDS5BQ9NTI5 1447 aa20.75■□□□□ 0.91
PCDHB13-201ENST00000341948 CFDP1Q9UEE9 299 aaPredicted RBP20.74■□□□□ 0.91
PCDHB13-201ENST00000341948 CUX2O14529 1486 aa20.73■□□□□ 0.91
PCDHB13-201ENST00000341948 CEP164Q9UPV0 1460 aa20.72■□□□□ 0.91
PCDHB13-201ENST00000341948 KDM2AQ9Y2K7 1162 aa20.72■□□□□ 0.91
PCDHB13-201ENST00000341948 CARMIL1Q5VZK9 1371 aa20.7■□□□□ 0.9
PCDHB13-201ENST00000341948 CCDC88BA6NC98 1476 aa20.7■□□□□ 0.9
PCDHB13-201ENST00000341948 ARID4BQ4LE39 1312 aaPredicted RBP20.68■□□□□ 0.9
PCDHB13-201ENST00000341948 MYO15BQ96JP2 1530 aa20.68■□□□□ 0.9
PCDHB13-201ENST00000341948 TNIKQ9UKE5 1360 aa20.66■□□□□ 0.9
PCDHB13-201ENST00000341948 SENP3Q9H4L4 574 aaPredicted RBP20.63■□□□□ 0.89
PCDHB13-201ENST00000341948 CANXP27824 592 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms