RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF4-223ENST00000603232 NISCHQ9Y2I1 1504 aa34.34■■■■□ 3.09
CELF4-223ENST00000603232 CCDC180Q9P1Z9 1646 aa30.3■■■□□ 2.44
CELF4-223ENST00000603232 ABCC9O60706 1549 aa29.3■■■□□ 2.28
CELF4-223ENST00000603232 ZCCHC6Q5VYS8 1495 aaKnown RBP28.71■■■□□ 2.19
CELF4-223ENST00000603232 DCAF8L2P0C7V8 631 aa28.57■■■□□ 2.16
CELF4-223ENST00000603232 DCAF1Q9Y4B6 1507 aa28.34■■■□□ 2.13
CELF4-223ENST00000603232 NACADO15069 1562 aa28.33■■■□□ 2.13
CELF4-223ENST00000603232 RB1CC1Q8TDY2 1594 aa28.28■■■□□ 2.12
CELF4-223ENST00000603232 MYO15BQ96JP2 1530 aa28.25■■■□□ 2.11
CELF4-223ENST00000603232 UNC13AQ9UPW8 1703 aa27.83■■■□□ 2.05
CELF4-223ENST00000603232 SCRIBQ14160 1630 aa27.82■■■□□ 2.04
CELF4-223ENST00000603232 SHROOM4Q9ULL8 1493 aa27.58■■■□□ 2.01
CELF4-223ENST00000603232 BICRAQ9NZM4 1560 aa27.5■■□□□ 1.99
CELF4-223ENST00000603232 PABPN1Q86U42 306 aaKnown RBP eCLIP27.47■■□□□ 1.99
CELF4-223ENST00000603232 CECR2Q9BXF3 1484 aa26.78■■□□□ 1.88
CELF4-223ENST00000603232 EIF4G1Q04637 1599 aaKnown RBP26.7■■□□□ 1.87
CELF4-223ENST00000603232 SMARCA4P51532 1647 aa26.59■■□□□ 1.85
CELF4-223ENST00000603232 BAZ1AQ9NRL2 1556 aaPredicted RBP26.56■■□□□ 1.84
CELF4-223ENST00000603232 MROH2BQ7Z745 1585 aa26.54■■□□□ 1.84
CELF4-223ENST00000603232 CC2D2AQ9P2K1 1620 aa26.5■■□□□ 1.83
CELF4-223ENST00000603232 DNAJC5BQ9UF47 199 aa26.48■■□□□ 1.83
CELF4-223ENST00000603232 RSF1Q96T23 1441 aaPredicted RBP26.36■■□□□ 1.81
CELF4-223ENST00000603232 WIZO95785 1651 aa26.33■■□□□ 1.81
CELF4-223ENST00000603232 ATAD2BQ9ULI0 1458 aa26.28■■□□□ 1.8
CELF4-223ENST00000603232 PEG3Q9GZU2 1588 aa26.25■■□□□ 1.79
CELF4-223ENST00000603232 SMARCA2P51531 1590 aa26.23■■□□□ 1.79
CELF4-223ENST00000603232 SUPT5HO00267 1087 aaKnown RBP26.19■■□□□ 1.78
CELF4-223ENST00000603232 NCAPD3P42695 1498 aa26.14■■□□□ 1.77
CELF4-223ENST00000603232 BAZ1BQ9UIG0 1483 aaKnown RBP26.1■■□□□ 1.77
CELF4-223ENST00000603232 HMGXB3Q12766 1538 aa26.08■■□□□ 1.76
CELF4-223ENST00000603232 TOP2AP11388 1531 aaKnown RBP25.98■■□□□ 1.75
CELF4-223ENST00000603232 CHIC1Q5VXU3 224 aa25.75■■□□□ 1.71
CELF4-223ENST00000603232 CCDC88BA6NC98 1476 aa25.69■■□□□ 1.7
CELF4-223ENST00000603232 NESP48681 1621 aa25.53■■□□□ 1.68
CELF4-223ENST00000603232 CADPSQ9ULU8 1353 aa25.41■■□□□ 1.66
CELF4-223ENST00000603232 LAMC3Q9Y6N6 1575 aa25.39■■□□□ 1.66
CELF4-223ENST00000603232 CFTRP13569 1480 aa25.37■■□□□ 1.65
CELF4-223ENST00000603232 PRDM2Q13029 1718 aa25.31■■□□□ 1.64
CELF4-223ENST00000603232 HRCP23327 699 aa25.27■■□□□ 1.64
CELF4-223ENST00000603232 KIF21AQ7Z4S6 1674 aa25.25■■□□□ 1.63
CELF4-223ENST00000603232 FANCD2Q9BXW9 1451 aa25.17■■□□□ 1.62
CELF4-223ENST00000603232 PDS5BQ9NTI5 1447 aa25.17■■□□□ 1.62
CELF4-223ENST00000603232 ERCC6Q03468 1493 aa25.15■■□□□ 1.62
CELF4-223ENST00000603232 CEP164Q9UPV0 1460 aa25.08■■□□□ 1.61
CELF4-223ENST00000603232 ABCC8Q09428 1581 aa25■■□□□ 1.59
CELF4-223ENST00000603232 THOC2Q8NI27 1593 aaKnown RBP24.99■■□□□ 1.59
CELF4-223ENST00000603232 MRC2Q9UBG0 1479 aa24.95■■□□□ 1.58
CELF4-223ENST00000603232 URB2Q14146 1524 aaKnown RBP24.94■■□□□ 1.58
CELF4-223ENST00000603232 PCGF6Q9BYE7 350 aa24.89■■□□□ 1.58
CELF4-223ENST00000603232 CUX1P39880 1505 aa24.86■■□□□ 1.57
CELF4-223ENST00000603232 WDR62O43379 1518 aa24.86■■□□□ 1.57
CELF4-223ENST00000603232 TOPBP1Q92547 1522 aa24.84■■□□□ 1.57
CELF4-223ENST00000603232 DNMBPQ6XZF7 1577 aa24.84■■□□□ 1.57
CELF4-223ENST00000603232 SYNJ1O43426 1573 aa24.83■■□□□ 1.57
CELF4-223ENST00000603232 WRNQ14191 1432 aaPredicted RBP eCLIP24.82■■□□□ 1.56
CELF4-223ENST00000603232 LOC105371045A0A1W2PR82 267 aa24.78■■□□□ 1.56
CELF4-223ENST00000603232 BIVM-ERCC5R4GMW8 1640 aa24.75■■□□□ 1.55
CELF4-223ENST00000603232 TOP2BQ02880 1626 aa24.74■■□□□ 1.55
CELF4-223ENST00000603232 FGD5Q6ZNL6 1462 aa24.69■■□□□ 1.54
CELF4-223ENST00000603232 POLA1P09884 1462 aaPredicted RBP24.66■■□□□ 1.54
CELF4-223ENST00000603232 CUX2O14529 1486 aa24.64■■□□□ 1.53
CELF4-223ENST00000603232 TRIM26Q12899 539 aaPredicted RBP24.63■■□□□ 1.53
CELF4-223ENST00000603232 RAD54L2Q9Y4B4 1467 aa24.6■■□□□ 1.53
CELF4-223ENST00000603232 PPARGC1BQ86YN6 1023 aaKnown RBP24.57■■□□□ 1.52
CELF4-223ENST00000603232 TRIM41Q8WV44 630 aa24.56■■□□□ 1.52
CELF4-223ENST00000603232 TARBP1Q13395 1621 aaKnown RBP24.55■■□□□ 1.52
CELF4-223ENST00000603232 SOGA1O94964 1423 aa24.53■■□□□ 1.52
CELF4-223ENST00000603232 IFT140Q96RY7 1462 aa24.5■■□□□ 1.51
CELF4-223ENST00000603232 WDR97A6NE52 1622 aa24.5■■□□□ 1.51
CELF4-223ENST00000603232 ZNF608Q9ULD9 1512 aaPredicted RBP24.47■■□□□ 1.51
CELF4-223ENST00000603232 ABCA10Q8WWZ4 1543 aa24.42■■□□□ 1.5
CELF4-223ENST00000603232 TDRD9Q8NDG6 1382 aaKnown RBP24.39■■□□□ 1.49
CELF4-223ENST00000603232 EIF4G3O43432 1585 aaKnown RBP24.39■■□□□ 1.49
CELF4-223ENST00000603232 AQRO60306 1485 aaKnown RBP eCLIP24.37■■□□□ 1.49
CELF4-223ENST00000603232 ABCA5Q8WWZ7 1642 aa24.33■■□□□ 1.49
CELF4-223ENST00000603232 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
CELF4-223ENST00000603232 PBRM1Q86U86 1689 aa24.28■■□□□ 1.48
CELF4-223ENST00000603232 GAPVD1Q14C86 1478 aa24.27■■□□□ 1.48
CELF4-223ENST00000603232 ZEB1P37275 1124 aaPredicted RBP24.26■■□□□ 1.47
CELF4-223ENST00000603232 KIF27Q86VH2 1401 aa24.23■■□□□ 1.47
CELF4-223ENST00000603232 GRIN2BQ13224 1484 aa24.17■■□□□ 1.46
CELF4-223ENST00000603232 FAM9AQ8IZU1 332 aaPredicted RBP24.17■■□□□ 1.46
CELF4-223ENST00000603232 DNAJC5Q9H3Z4 198 aa24.16■■□□□ 1.46
CELF4-223ENST00000603232 SNAPC4Q5SXM2 1469 aa24.14■■□□□ 1.46
CELF4-223ENST00000603232 ERICH3Q5RHP9 1530 aa24.12■■□□□ 1.45
CELF4-223ENST00000603232 IGF1RP08069 1367 aa24.1■■□□□ 1.45
CELF4-223ENST00000603232 ADAMTS12P58397 1594 aa24.07■■□□□ 1.44
CELF4-223ENST00000603232 MAGI1Q96QZ7 1491 aaPredicted RBP24.05■■□□□ 1.44
CELF4-223ENST00000603232 CHD1O14646 1710 aa24.03■■□□□ 1.44
CELF4-223ENST00000603232 EEA1Q15075 1411 aa24.02■■□□□ 1.44
CELF4-223ENST00000603232 CUL7Q14999 1698 aa24.02■■□□□ 1.44
CELF4-223ENST00000603232 CSRNP3Q8WYN3 585 aa23.99■■□□□ 1.43
CELF4-223ENST00000603232 FBLN2P98095 1184 aa23.98■■□□□ 1.43
CELF4-223ENST00000603232 FHAD1B1AJZ9 1412 aa23.97■■□□□ 1.43
CELF4-223ENST00000603232 SYNJ2O15056 1496 aa23.97■■□□□ 1.43
CELF4-223ENST00000603232 CARMIL1Q5VZK9 1371 aa23.96■■□□□ 1.43
CELF4-223ENST00000603232 PRXQ9BXM0 1461 aa23.91■■□□□ 1.42
CELF4-223ENST00000603232 CHMP7Q8WUX9 453 aaPredicted RBP23.91■■□□□ 1.42
CELF4-223ENST00000603232 EHMT2Q96KQ7 1210 aa23.91■■□□□ 1.42
CELF4-223ENST00000603232 GRIN2AQ12879 1464 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 632.2 ms