RNA–Protein interactions for RNA: ENST00000389363.4

TM6SF2-201, Transcript of transmembrane 6 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF2, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF2-201ENST00000389363 NISCHQ9Y2I1 1504 aa38.11■■■■□ 3.69
TM6SF2-201ENST00000389363 CCDC180Q9P1Z9 1646 aa33.84■■■■□ 3.01
TM6SF2-201ENST00000389363 ABCC9O60706 1549 aa33.08■■■□□ 2.89
TM6SF2-201ENST00000389363 DCAF8L2P0C7V8 631 aa31.87■■■□□ 2.69
TM6SF2-201ENST00000389363 RB1CC1Q8TDY2 1594 aa31.83■■■□□ 2.69
TM6SF2-201ENST00000389363 NACADO15069 1562 aa31.8■■■□□ 2.68
TM6SF2-201ENST00000389363 ZCCHC6Q5VYS8 1495 aaKnown RBP31.76■■■□□ 2.67
TM6SF2-201ENST00000389363 MYO15BQ96JP2 1530 aa31.62■■■□□ 2.65
TM6SF2-201ENST00000389363 DCAF1Q9Y4B6 1507 aa31.51■■■□□ 2.63
TM6SF2-201ENST00000389363 UNC13AQ9UPW8 1703 aa31.1■■■□□ 2.57
TM6SF2-201ENST00000389363 PABPN1Q86U42 306 aaKnown RBP eCLIP30.93■■■□□ 2.54
TM6SF2-201ENST00000389363 SCRIBQ14160 1630 aa30.92■■■□□ 2.54
TM6SF2-201ENST00000389363 BICRAQ9NZM4 1560 aa30.86■■■□□ 2.53
TM6SF2-201ENST00000389363 SHROOM4Q9ULL8 1493 aa30.52■■■□□ 2.48
TM6SF2-201ENST00000389363 DNAJC5BQ9UF47 199 aa30.29■■■□□ 2.44
TM6SF2-201ENST00000389363 EIF4G1Q04637 1599 aaKnown RBP30.05■■■□□ 2.4
TM6SF2-201ENST00000389363 CC2D2AQ9P2K1 1620 aa29.91■■■□□ 2.38
TM6SF2-201ENST00000389363 CECR2Q9BXF3 1484 aa29.71■■■□□ 2.35
TM6SF2-201ENST00000389363 SMARCA4P51532 1647 aa29.56■■■□□ 2.32
TM6SF2-201ENST00000389363 BAZ1AQ9NRL2 1556 aaPredicted RBP29.54■■■□□ 2.32
TM6SF2-201ENST00000389363 MROH2BQ7Z745 1585 aa29.38■■■□□ 2.29
TM6SF2-201ENST00000389363 ATAD2BQ9ULI0 1458 aa29.38■■■□□ 2.29
TM6SF2-201ENST00000389363 NCAPD3P42695 1498 aa29.35■■■□□ 2.29
TM6SF2-201ENST00000389363 SMARCA2P51531 1590 aa29.35■■■□□ 2.29
TM6SF2-201ENST00000389363 PEG3Q9GZU2 1588 aa29.25■■■□□ 2.27
TM6SF2-201ENST00000389363 HMGXB3Q12766 1538 aa29.21■■■□□ 2.27
TM6SF2-201ENST00000389363 BAZ1BQ9UIG0 1483 aaKnown RBP29.16■■■□□ 2.26
TM6SF2-201ENST00000389363 WIZO95785 1651 aa29.07■■■□□ 2.24
TM6SF2-201ENST00000389363 RSF1Q96T23 1441 aaPredicted RBP29.07■■■□□ 2.24
TM6SF2-201ENST00000389363 TOP2AP11388 1531 aaKnown RBP28.76■■■□□ 2.19
TM6SF2-201ENST00000389363 NESP48681 1621 aa28.65■■■□□ 2.18
TM6SF2-201ENST00000389363 LAMC3Q9Y6N6 1575 aa28.57■■■□□ 2.16
TM6SF2-201ENST00000389363 ERCC6Q03468 1493 aa28.52■■■□□ 2.16
TM6SF2-201ENST00000389363 CADPSQ9ULU8 1353 aa28.51■■■□□ 2.15
TM6SF2-201ENST00000389363 SUPT5HO00267 1087 aaKnown RBP28.43■■■□□ 2.14
TM6SF2-201ENST00000389363 CCDC88BA6NC98 1476 aa28.43■■■□□ 2.14
TM6SF2-201ENST00000389363 PDS5BQ9NTI5 1447 aa28.38■■■□□ 2.13
TM6SF2-201ENST00000389363 CFTRP13569 1480 aa28.35■■■□□ 2.13
TM6SF2-201ENST00000389363 KIF21AQ7Z4S6 1674 aa28.3■■■□□ 2.12
TM6SF2-201ENST00000389363 FANCD2Q9BXW9 1451 aa28.19■■■□□ 2.1
TM6SF2-201ENST00000389363 THOC2Q8NI27 1593 aaKnown RBP28.18■■■□□ 2.1
TM6SF2-201ENST00000389363 CUX2O14529 1486 aa28.16■■■□□ 2.1
TM6SF2-201ENST00000389363 CEP164Q9UPV0 1460 aa28.15■■■□□ 2.1
TM6SF2-201ENST00000389363 PRDM2Q13029 1718 aa28.12■■■□□ 2.09
TM6SF2-201ENST00000389363 MRC2Q9UBG0 1479 aa28.08■■■□□ 2.09
TM6SF2-201ENST00000389363 WDR62O43379 1518 aa27.98■■■□□ 2.07
TM6SF2-201ENST00000389363 URB2Q14146 1524 aaKnown RBP27.9■■■□□ 2.06
TM6SF2-201ENST00000389363 TOPBP1Q92547 1522 aa27.74■■■□□ 2.03
TM6SF2-201ENST00000389363 ABCC8Q09428 1581 aa27.74■■■□□ 2.03
TM6SF2-201ENST00000389363 DNMBPQ6XZF7 1577 aa27.71■■■□□ 2.03
TM6SF2-201ENST00000389363 CUX1P39880 1505 aa27.56■■■□□ 2
TM6SF2-201ENST00000389363 IFT140Q96RY7 1462 aa27.54■■■□□ 2
TM6SF2-201ENST00000389363 POLA1P09884 1462 aaPredicted RBP27.51■■□□□ 1.99
TM6SF2-201ENST00000389363 FGD5Q6ZNL6 1462 aa27.46■■□□□ 1.99
TM6SF2-201ENST00000389363 ZNF608Q9ULD9 1512 aaPredicted RBP27.43■■□□□ 1.98
TM6SF2-201ENST00000389363 TARBP1Q13395 1621 aaKnown RBP27.43■■□□□ 1.98
TM6SF2-201ENST00000389363 WRNQ14191 1432 aaPredicted RBP eCLIP27.42■■□□□ 1.98
TM6SF2-201ENST00000389363 SOGA1O94964 1423 aa27.41■■□□□ 1.98
TM6SF2-201ENST00000389363 RAD54L2Q9Y4B4 1467 aa27.4■■□□□ 1.98
TM6SF2-201ENST00000389363 SYNJ1O43426 1573 aa27.34■■□□□ 1.97
TM6SF2-201ENST00000389363 TOP2BQ02880 1626 aa27.34■■□□□ 1.97
TM6SF2-201ENST00000389363 BIVM-ERCC5R4GMW8 1640 aa27.33■■□□□ 1.97
TM6SF2-201ENST00000389363 EIF4G3O43432 1585 aaKnown RBP27.32■■□□□ 1.96
TM6SF2-201ENST00000389363 AQRO60306 1485 aaKnown RBP eCLIP27.29■■□□□ 1.96
TM6SF2-201ENST00000389363 TDRD9Q8NDG6 1382 aaKnown RBP27.26■■□□□ 1.95
TM6SF2-201ENST00000389363 DNAJC5Q9H3Z4 198 aa27.22■■□□□ 1.95
TM6SF2-201ENST00000389363 WDR97A6NE52 1622 aa27.21■■□□□ 1.95
TM6SF2-201ENST00000389363 ABCA10Q8WWZ4 1543 aa27.18■■□□□ 1.94
TM6SF2-201ENST00000389363 GAPVD1Q14C86 1478 aa27.09■■□□□ 1.93
TM6SF2-201ENST00000389363 ABCA5Q8WWZ7 1642 aa27.07■■□□□ 1.92
TM6SF2-201ENST00000389363 GRIN2BQ13224 1484 aa27.07■■□□□ 1.92
TM6SF2-201ENST00000389363 SNAPC4Q5SXM2 1469 aa27.04■■□□□ 1.92
TM6SF2-201ENST00000389363 OSCARQ8IYS5 282 aa27.02■■□□□ 1.92
TM6SF2-201ENST00000389363 PBRM1Q86U86 1689 aa27.02■■□□□ 1.92
TM6SF2-201ENST00000389363 MAGI1Q96QZ7 1491 aaPredicted RBP26.99■■□□□ 1.91
TM6SF2-201ENST00000389363 FBLN2P98095 1184 aa26.98■■□□□ 1.91
TM6SF2-201ENST00000389363 CHD1O14646 1710 aa26.96■■□□□ 1.91
TM6SF2-201ENST00000389363 CHMP7Q8WUX9 453 aaPredicted RBP26.9■■□□□ 1.9
TM6SF2-201ENST00000389363 SYNJ2O15056 1496 aa26.89■■□□□ 1.9
TM6SF2-201ENST00000389363 ERICH3Q5RHP9 1530 aa26.86■■□□□ 1.89
TM6SF2-201ENST00000389363 TRIM41Q8WV44 630 aa26.85■■□□□ 1.89
TM6SF2-201ENST00000389363 KIF27Q86VH2 1401 aa26.83■■□□□ 1.89
TM6SF2-201ENST00000389363 ADAMTS12P58397 1594 aa26.81■■□□□ 1.88
TM6SF2-201ENST00000389363 FHAD1B1AJZ9 1412 aa26.77■■□□□ 1.88
TM6SF2-201ENST00000389363 GRIN2AQ12879 1464 aa26.73■■□□□ 1.87
TM6SF2-201ENST00000389363 IGF1RP08069 1367 aa26.72■■□□□ 1.87
TM6SF2-201ENST00000389363 CLASP1Q7Z460 1538 aa26.66■■□□□ 1.86
TM6SF2-201ENST00000389363 CUL7Q14999 1698 aa26.63■■□□□ 1.85
TM6SF2-201ENST00000389363 RUSC2Q8N2Y8 1516 aa26.62■■□□□ 1.85
TM6SF2-201ENST00000389363 NUP160Q12769 1436 aa26.59■■□□□ 1.85
TM6SF2-201ENST00000389363 CEP170Q5SW79 1584 aa26.59■■□□□ 1.85
TM6SF2-201ENST00000389363 ARHGEF11O15085 1522 aa26.58■■□□□ 1.85
TM6SF2-201ENST00000389363 RIMBP3CA6NJZ7 1639 aa26.57■■□□□ 1.84
TM6SF2-201ENST00000389363 RIMBP3BA6NNM3 1639 aa26.57■■□□□ 1.84
TM6SF2-201ENST00000389363 RIMBP3Q9UFD9 1639 aa26.57■■□□□ 1.84
TM6SF2-201ENST00000389363 CARMIL1Q5VZK9 1371 aa26.56■■□□□ 1.84
TM6SF2-201ENST00000389363 CHIC1Q5VXU3 224 aa26.55■■□□□ 1.84
TM6SF2-201ENST00000389363 RAPGEF2Q9Y4G8 1499 aa26.41■■□□□ 1.82
TM6SF2-201ENST00000389363 SHROOM2Q13796 1616 aa26.38■■□□□ 1.81
TM6SF2-201ENST00000389363 ARAP1Q96P48 1450 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms