RNA–Protein interactions for RNA: ENST00000427218.1

FAM8A3P-201, Transcript of family with sequence similarity 8 member A3, pseudogene, humanhuman

BASIC

Gene FAM8A3P, Length 844 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM8A3P-201ENST00000427218 NISCHQ9Y2I1 1504 aa41.21■■■■■ 4.19
FAM8A3P-201ENST00000427218 ABCC9O60706 1549 aa37.87■■■■□ 3.65
FAM8A3P-201ENST00000427218 CCDC180Q9P1Z9 1646 aa37.21■■■■□ 3.55
FAM8A3P-201ENST00000427218 DNAJC5BQ9UF47 199 aa36.09■■■■□ 3.37
FAM8A3P-201ENST00000427218 RB1CC1Q8TDY2 1594 aa35.76■■■■□ 3.32
FAM8A3P-201ENST00000427218 NACADO15069 1562 aa35.37■■■■□ 3.25
FAM8A3P-201ENST00000427218 PABPN1Q86U42 306 aaKnown RBP eCLIP35.18■■■■□ 3.22
FAM8A3P-201ENST00000427218 DCAF8L2P0C7V8 631 aa35.11■■■■□ 3.21
FAM8A3P-201ENST00000427218 UNC13AQ9UPW8 1703 aa34.89■■■■□ 3.18
FAM8A3P-201ENST00000427218 BICRAQ9NZM4 1560 aa34.72■■■■□ 3.15
FAM8A3P-201ENST00000427218 MYO15BQ96JP2 1530 aa34.67■■■■□ 3.14
FAM8A3P-201ENST00000427218 SHROOM4Q9ULL8 1493 aa34.21■■■■□ 3.07
FAM8A3P-201ENST00000427218 CECR2Q9BXF3 1484 aa34.2■■■■□ 3.06
FAM8A3P-201ENST00000427218 CC2D2AQ9P2K1 1620 aa34.16■■■■□ 3.06
FAM8A3P-201ENST00000427218 ZCCHC6Q5VYS8 1495 aaKnown RBP34.01■■■■□ 3.03
FAM8A3P-201ENST00000427218 DCAF1Q9Y4B6 1507 aa33.99■■■■□ 3.03
FAM8A3P-201ENST00000427218 EIF4G1Q04637 1599 aaKnown RBP33.94■■■■□ 3.02
FAM8A3P-201ENST00000427218 SCRIBQ14160 1630 aa33.9■■■■□ 3.02
FAM8A3P-201ENST00000427218 DNAJC5Q9H3Z4 198 aa33.62■■■□□ 2.97
FAM8A3P-201ENST00000427218 CUX2O14529 1486 aa32.9■■■□□ 2.86
FAM8A3P-201ENST00000427218 ERCC6Q03468 1493 aa32.76■■■□□ 2.84
FAM8A3P-201ENST00000427218 NCAPD3P42695 1498 aa32.67■■■□□ 2.82
FAM8A3P-201ENST00000427218 ATAD2BQ9ULI0 1458 aa32.48■■■□□ 2.79
FAM8A3P-201ENST00000427218 HMGXB3Q12766 1538 aa32.36■■■□□ 2.77
FAM8A3P-201ENST00000427218 SMARCA2P51531 1590 aa32.35■■■□□ 2.77
FAM8A3P-201ENST00000427218 NESP48681 1621 aa32.34■■■□□ 2.77
FAM8A3P-201ENST00000427218 SMARCA4P51532 1647 aa32.26■■■□□ 2.76
FAM8A3P-201ENST00000427218 BAZ1BQ9UIG0 1483 aaKnown RBP32.14■■■□□ 2.74
FAM8A3P-201ENST00000427218 THOC2Q8NI27 1593 aaKnown RBP32.12■■■□□ 2.73
FAM8A3P-201ENST00000427218 BAZ1AQ9NRL2 1556 aaPredicted RBP32.02■■■□□ 2.72
FAM8A3P-201ENST00000427218 LAMC3Q9Y6N6 1575 aa32.02■■■□□ 2.72
FAM8A3P-201ENST00000427218 PEG3Q9GZU2 1588 aa31.95■■■□□ 2.71
FAM8A3P-201ENST00000427218 TRIM41Q8WV44 630 aa31.9■■■□□ 2.7
FAM8A3P-201ENST00000427218 PDS5BQ9NTI5 1447 aa31.89■■■□□ 2.7
FAM8A3P-201ENST00000427218 KIF21AQ7Z4S6 1674 aa31.87■■■□□ 2.69
FAM8A3P-201ENST00000427218 MROH2BQ7Z745 1585 aa31.73■■■□□ 2.67
FAM8A3P-201ENST00000427218 CADPSQ9ULU8 1353 aa31.66■■■□□ 2.66
FAM8A3P-201ENST00000427218 MRC2Q9UBG0 1479 aa31.64■■■□□ 2.66
FAM8A3P-201ENST00000427218 WDR62O43379 1518 aa31.56■■■□□ 2.64
FAM8A3P-201ENST00000427218 CEP164Q9UPV0 1460 aa31.38■■■□□ 2.61
FAM8A3P-201ENST00000427218 OSCARQ8IYS5 282 aa31.33■■■□□ 2.61
FAM8A3P-201ENST00000427218 WIZO95785 1651 aa31.31■■■□□ 2.6
FAM8A3P-201ENST00000427218 FANCD2Q9BXW9 1451 aa31.29■■■□□ 2.6
FAM8A3P-201ENST00000427218 CFTRP13569 1480 aa31.15■■■□□ 2.58
FAM8A3P-201ENST00000427218 URB2Q14146 1524 aaKnown RBP31.06■■■□□ 2.56
FAM8A3P-201ENST00000427218 RIMBP3CA6NJZ7 1639 aa30.93■■■□□ 2.54
FAM8A3P-201ENST00000427218 RIMBP3BA6NNM3 1639 aa30.93■■■□□ 2.54
FAM8A3P-201ENST00000427218 RIMBP3Q9UFD9 1639 aa30.93■■■□□ 2.54
FAM8A3P-201ENST00000427218 TOP2AP11388 1531 aaKnown RBP30.88■■■□□ 2.53
FAM8A3P-201ENST00000427218 RSF1Q96T23 1441 aaPredicted RBP30.87■■■□□ 2.53
FAM8A3P-201ENST00000427218 ARHGEF11O15085 1522 aa30.79■■■□□ 2.52
FAM8A3P-201ENST00000427218 ZNF608Q9ULD9 1512 aaPredicted RBP30.78■■■□□ 2.52
FAM8A3P-201ENST00000427218 IFT140Q96RY7 1462 aa30.78■■■□□ 2.52
FAM8A3P-201ENST00000427218 PRDM2Q13029 1718 aa30.72■■■□□ 2.51
FAM8A3P-201ENST00000427218 CYB5RLQ6IPT4 315 aa30.64■■■□□ 2.5
FAM8A3P-201ENST00000427218 TOPBP1Q92547 1522 aa30.63■■■□□ 2.49
FAM8A3P-201ENST00000427218 EIF4G3O43432 1585 aaKnown RBP30.56■■■□□ 2.48
FAM8A3P-201ENST00000427218 CCDC88BA6NC98 1476 aa30.56■■■□□ 2.48
FAM8A3P-201ENST00000427218 ABCC8Q09428 1581 aa30.53■■■□□ 2.48
FAM8A3P-201ENST00000427218 TRHP20396 242 aaPredicted RBP30.52■■■□□ 2.48
FAM8A3P-201ENST00000427218 DNMBPQ6XZF7 1577 aa30.45■■■□□ 2.46
FAM8A3P-201ENST00000427218 AQRO60306 1485 aaKnown RBP eCLIP30.44■■■□□ 2.46
FAM8A3P-201ENST00000427218 ARAP1Q96P48 1450 aa30.44■■■□□ 2.46
FAM8A3P-201ENST00000427218 CHD1O14646 1710 aa30.44■■■□□ 2.46
FAM8A3P-201ENST00000427218 FBLN2P98095 1184 aa30.4■■■□□ 2.46
FAM8A3P-201ENST00000427218 TARBP1Q13395 1621 aaKnown RBP30.37■■■□□ 2.45
FAM8A3P-201ENST00000427218 POLA1P09884 1462 aaPredicted RBP30.27■■■□□ 2.44
FAM8A3P-201ENST00000427218 RAD54L2Q9Y4B4 1467 aa30.18■■■□□ 2.42
FAM8A3P-201ENST00000427218 TDRD9Q8NDG6 1382 aaKnown RBP30.16■■■□□ 2.42
FAM8A3P-201ENST00000427218 SOGA1O94964 1423 aa30.14■■■□□ 2.42
FAM8A3P-201ENST00000427218 SNAPC4Q5SXM2 1469 aa30.11■■■□□ 2.41
FAM8A3P-201ENST00000427218 CLASP1Q7Z460 1538 aa30.1■■■□□ 2.41
FAM8A3P-201ENST00000427218 AEBP2Q6ZN18 517 aaPredicted RBP30.09■■■□□ 2.41
FAM8A3P-201ENST00000427218 CHMP7Q8WUX9 453 aaPredicted RBP30.07■■■□□ 2.4
FAM8A3P-201ENST00000427218 SYNJ1O43426 1573 aa30.03■■■□□ 2.4
FAM8A3P-201ENST00000427218 WDR97A6NE52 1622 aa30.03■■■□□ 2.4
FAM8A3P-201ENST00000427218 MAGI1Q96QZ7 1491 aaPredicted RBP30■■■□□ 2.39
FAM8A3P-201ENST00000427218 FGD5Q6ZNL6 1462 aa29.99■■■□□ 2.39
FAM8A3P-201ENST00000427218 GRIN2BQ13224 1484 aa29.94■■■□□ 2.38
FAM8A3P-201ENST00000427218 SYNJ2O15056 1496 aa29.92■■■□□ 2.38
FAM8A3P-201ENST00000427218 CUX1P39880 1505 aa29.86■■■□□ 2.37
FAM8A3P-201ENST00000427218 GAPVD1Q14C86 1478 aa29.85■■■□□ 2.37
FAM8A3P-201ENST00000427218 PBRM1Q86U86 1689 aa29.72■■■□□ 2.35
FAM8A3P-201ENST00000427218 ABCA10Q8WWZ4 1543 aa29.61■■■□□ 2.33
FAM8A3P-201ENST00000427218 ABCA5Q8WWZ7 1642 aa29.6■■■□□ 2.33
FAM8A3P-201ENST00000427218 ERCC6L2Q5T890 1561 aa29.59■■■□□ 2.33
FAM8A3P-201ENST00000427218 GRIN2AQ12879 1464 aa29.55■■■□□ 2.32
FAM8A3P-201ENST00000427218 CEP170Q5SW79 1584 aa29.5■■■□□ 2.31
FAM8A3P-201ENST00000427218 NUP160Q12769 1436 aa29.47■■■□□ 2.31
FAM8A3P-201ENST00000427218 ADAMTS12P58397 1594 aa29.43■■■□□ 2.3
FAM8A3P-201ENST00000427218 WRNQ14191 1432 aaPredicted RBP eCLIP29.4■■■□□ 2.3
FAM8A3P-201ENST00000427218 SHROOM2Q13796 1616 aa29.39■■■□□ 2.3
FAM8A3P-201ENST00000427218 FHAD1B1AJZ9 1412 aa29.36■■■□□ 2.29
FAM8A3P-201ENST00000427218 KIF13AQ9H1H9 1805 aa29.32■■■□□ 2.28
FAM8A3P-201ENST00000427218 PRG4Q92954 1404 aaPredicted RBP29.26■■■□□ 2.27
FAM8A3P-201ENST00000427218 ERICH3Q5RHP9 1530 aa29.23■■■□□ 2.27
FAM8A3P-201ENST00000427218 JPH4Q96JJ6 628 aa29.2■■■□□ 2.26
FAM8A3P-201ENST00000427218 TOP2BQ02880 1626 aa29.2■■■□□ 2.26
FAM8A3P-201ENST00000427218 BIVM-ERCC5R4GMW8 1640 aa29.19■■■□□ 2.26
FAM8A3P-201ENST00000427218 FAM69CQ0P6D2 419 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms