RNA–Protein interactions for RNA: ENST00000342085.8

PDPK1-202, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPK1, Length 7,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-202ENST00000342085 DCAF8L2P0C7V8 631 aa25.57■■□□□ 1.68
PDPK1-202ENST00000342085 EHMT2Q96KQ7 1210 aa23.51■■□□□ 1.35
PDPK1-202ENST00000342085 SUPT5HO00267 1087 aaKnown RBP23.31■■□□□ 1.32
PDPK1-202ENST00000342085 FAM9AQ8IZU1 332 aaPredicted RBP23.24■■□□□ 1.31
PDPK1-202ENST00000342085 APLP2Q06481 763 aa23■■□□□ 1.27
PDPK1-202ENST00000342085 PELP1Q8IZL8 1130 aaKnown RBP23■■□□□ 1.27
PDPK1-202ENST00000342085 SHROOM4Q9ULL8 1493 aa22.71■■□□□ 1.23
PDPK1-202ENST00000342085 TTBK1Q5TCY1 1321 aaPredicted RBP22.61■■□□□ 1.21
PDPK1-202ENST00000342085 ATP1B4Q9UN42 357 aaPredicted RBP22.59■■□□□ 1.21
PDPK1-202ENST00000342085 RANGAP1P46060 587 aaPredicted RBP22.55■■□□□ 1.2
PDPK1-202ENST00000342085 ERICH6Q7L0X2 663 aa22.33■■□□□ 1.16
PDPK1-202ENST00000342085 MYT1LQ9UL68 1186 aa22.26■■□□□ 1.15
PDPK1-202ENST00000342085 CCER1Q8TC90 406 aaPredicted RBP22.05■■□□□ 1.12
PDPK1-202ENST00000342085 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
PDPK1-202ENST00000342085 PCGF6Q9BYE7 350 aa21.89■■□□□ 1.1
PDPK1-202ENST00000342085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.76■■□□□ 1.07
PDPK1-202ENST00000342085 HNRNPUL2Q1KMD3 747 aaKnown RBP21.76■■□□□ 1.07
PDPK1-202ENST00000342085 UBTFP17480 764 aaKnown RBP21.68■■□□□ 1.06
PDPK1-202ENST00000342085 POLR3GLQ9BT43 218 aa21.67■■□□□ 1.06
PDPK1-202ENST00000342085 SLC4A1APQ9BWU0 796 aaKnown RBP21.65■■□□□ 1.06
PDPK1-202ENST00000342085 NEFLP07196 543 aa21.62■■□□□ 1.05
PDPK1-202ENST00000342085 NISCHQ9Y2I1 1504 aa21.52■■□□□ 1.04
PDPK1-202ENST00000342085 CENPBP07199 599 aaPredicted RBP21.48■■□□□ 1.03
PDPK1-202ENST00000342085 DAXXQ9UER7 740 aaPredicted RBP21.47■■□□□ 1.03
PDPK1-202ENST00000342085 CNGB1Q14028 1251 aaPredicted RBP21.46■■□□□ 1.03
PDPK1-202ENST00000342085 TRIM41Q8WV44 630 aa21.44■■□□□ 1.02
PDPK1-202ENST00000342085 MYT1Q01538 1121 aa21.4■■□□□ 1.02
PDPK1-202ENST00000342085 YTHDC1Q96MU7 727 aaKnown RBP21.37■■□□□ 1.01
PDPK1-202ENST00000342085 ITGAEP38570 1179 aa21.29■■□□□ 1
PDPK1-202ENST00000342085 SLC24A1O60721 1099 aa21.15■□□□□ 0.98
PDPK1-202ENST00000342085 PPARGC1BQ86YN6 1023 aaKnown RBP21.13■□□□□ 0.97
PDPK1-202ENST00000342085 BCANQ96GW7 911 aa21.03■□□□□ 0.96
PDPK1-202ENST00000342085 CLSPNQ9HAW4 1339 aa21.03■□□□□ 0.96
PDPK1-202ENST00000342085 ZEB1P37275 1124 aaPredicted RBP21.02■□□□□ 0.96
PDPK1-202ENST00000342085 BCL11AQ9H165 835 aa20.89■□□□□ 0.93
PDPK1-202ENST00000342085 ZNF316A6NFI3 1004 aaPredicted RBP20.86■□□□□ 0.93
PDPK1-202ENST00000342085 PLPPR3Q6T4P5 718 aa20.84■□□□□ 0.93
PDPK1-202ENST00000342085 ZBTB47Q9UFB7 747 aaPredicted RBP20.8■□□□□ 0.92
PDPK1-202ENST00000342085 FBLN2P98095 1184 aa20.74■□□□□ 0.91
PDPK1-202ENST00000342085 TRIM52Q96A61 297 aa20.64■□□□□ 0.89
PDPK1-202ENST00000342085 ESF1Q9H501 851 aaKnown RBP20.59■□□□□ 0.89
PDPK1-202ENST00000342085 ZNF326Q5BKZ1 582 aaKnown RBP20.55■□□□□ 0.88
PDPK1-202ENST00000342085 FAM50AQ14320 339 aaKnown RBP20.55■□□□□ 0.88
PDPK1-202ENST00000342085 NEFMP07197 916 aa20.51■□□□□ 0.87
PDPK1-202ENST00000342085 RTL5Q5HYW3 569 aaPredicted RBP20.47■□□□□ 0.87
PDPK1-202ENST00000342085 A0A0G2JS52 829 aa20.45■□□□□ 0.86
PDPK1-202ENST00000342085 CANXP27824 592 aaKnown RBP20.43■□□□□ 0.86
PDPK1-202ENST00000342085 SCAF1Q9H7N4 1312 aaKnown RBP20.39■□□□□ 0.85
PDPK1-202ENST00000342085 STAG3Q9UJ98 1225 aa20.36■□□□□ 0.85
PDPK1-202ENST00000342085 NEUROD1Q13562 356 aa20.32■□□□□ 0.84
PDPK1-202ENST00000342085 ARID3CA6NKF2 412 aa20.27■□□□□ 0.84
PDPK1-202ENST00000342085 CHGAP10645 457 aaKnown RBP20.21■□□□□ 0.83
PDPK1-202ENST00000342085 PABPN1Q86U42 306 aaKnown RBP eCLIP20.2■□□□□ 0.82
PDPK1-202ENST00000342085 PLEKHG5O94827 1062 aa20.15■□□□□ 0.82
PDPK1-202ENST00000342085 TRIM26Q12899 539 aaPredicted RBP20.13■□□□□ 0.81
PDPK1-202ENST00000342085 ZNF777Q9ULD5 760 aaPredicted RBP20.12■□□□□ 0.81
PDPK1-202ENST00000342085 NPM1P06748 294 aaKnown RBP eCLIP20.11■□□□□ 0.81
PDPK1-202ENST00000342085 ZBTB7CA1YPR0 619 aa20.04■□□□□ 0.8
PDPK1-202ENST00000342085 NPM2Q86SE8 214 aaKnown RBP20.02■□□□□ 0.8
PDPK1-202ENST00000342085 CDK11BP21127 795 aaKnown RBP19.98■□□□□ 0.79
PDPK1-202ENST00000342085 CDK11AQ9UQ88 783 aaPredicted RBP19.98■□□□□ 0.79
PDPK1-202ENST00000342085 P3H3Q8IVL6 736 aa19.94■□□□□ 0.78
PDPK1-202ENST00000342085 LOC105371045A0A1W2PR82 267 aa19.93■□□□□ 0.78
PDPK1-202ENST00000342085 ANP32CO43423 234 aa19.92■□□□□ 0.78
PDPK1-202ENST00000342085 HAP1P54257 671 aaPredicted RBP19.92■□□□□ 0.78
PDPK1-202ENST00000342085 C14orf37Q86TY3 774 aa19.91■□□□□ 0.78
PDPK1-202ENST00000342085 HRCP23327 699 aa19.9■□□□□ 0.78
PDPK1-202ENST00000342085 HSP90AA1P07900 732 aaKnown RBP19.89■□□□□ 0.78
PDPK1-202ENST00000342085 TULP1O00294 542 aaPredicted RBP19.88■□□□□ 0.77
PDPK1-202ENST00000342085 SENP3Q9H4L4 574 aaPredicted RBP19.86■□□□□ 0.77
PDPK1-202ENST00000342085 ABCC9O60706 1549 aa19.85■□□□□ 0.77
PDPK1-202ENST00000342085 ARXQ96QS3 562 aa19.81■□□□□ 0.76
PDPK1-202ENST00000342085 ANP32BQ92688 251 aaKnown RBP19.76■□□□□ 0.75
PDPK1-202ENST00000342085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.72■□□□□ 0.751e-9■■■□□ 16.9
PDPK1-202ENST00000342085 DIEXFQ68CQ4 756 aaKnown RBP19.72■□□□□ 0.75
PDPK1-202ENST00000342085 NPHP1O15259 732 aa19.71■□□□□ 0.75
PDPK1-202ENST00000342085 NCBP3Q53F19 620 aaKnown RBP19.68■□□□□ 0.74
PDPK1-202ENST00000342085 ARID4BQ4LE39 1312 aaPredicted RBP19.68■□□□□ 0.74
PDPK1-202ENST00000342085 PPP1R15AO75807 674 aaPredicted RBP19.63■□□□□ 0.73
PDPK1-202ENST00000342085 SALL2Q9Y467 1007 aaPredicted RBP19.6■□□□□ 0.73
PDPK1-202ENST00000342085 UPF2Q9HAU5 1272 aaKnown RBP19.58■□□□□ 0.73
PDPK1-202ENST00000342085 ANP32AP39687 249 aaKnown RBP19.56■□□□□ 0.72
PDPK1-202ENST00000342085 LMOD2Q6P5Q4 547 aa19.52■□□□□ 0.72
PDPK1-202ENST00000342085 TRHP20396 242 aaPredicted RBP19.48■□□□□ 0.71
PDPK1-202ENST00000342085 MYH16Q9H6N6 1097 aa19.45■□□□□ 0.7
PDPK1-202ENST00000342085 TAOK2Q9UL54 1235 aa19.42■□□□□ 0.7
PDPK1-202ENST00000342085 WDR43Q15061 677 aaKnown RBP eCLIP19.4■□□□□ 0.7
PDPK1-202ENST00000342085 KDM2AQ9Y2K7 1162 aa19.39■□□□□ 0.7
PDPK1-202ENST00000342085 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.36■□□□□ 0.69
PDPK1-202ENST00000342085 CLSTN1O94985 981 aa19.35■□□□□ 0.69
PDPK1-202ENST00000342085 EIF5BO60841 1220 aaKnown RBP19.35■□□□□ 0.69
PDPK1-202ENST00000342085 KCNH8Q96L42 1107 aa19.34■□□□□ 0.69
PDPK1-202ENST00000342085 FAM9BQ8IZU0 186 aa19.33■□□□□ 0.68
PDPK1-202ENST00000342085 CHIC2Q9UKJ5 165 aa19.32■□□□□ 0.68
PDPK1-202ENST00000342085 CHMP7Q8WUX9 453 aaPredicted RBP19.3■□□□□ 0.68
PDPK1-202ENST00000342085 TMC1Q8TDI8 760 aa19.29■□□□□ 0.68
PDPK1-202ENST00000342085 PPM1GO15355 546 aaPredicted RBP19.28■□□□□ 0.68
PDPK1-202ENST00000342085 TSPY4P0CV99 314 aa19.27■□□□□ 0.68
PDPK1-202ENST00000342085 TSPY10P0CW01 314 aa19.27■□□□□ 0.68
PDPK1-202ENST00000342085 TPRNQ4KMQ1 711 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms