RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 NISCHQ9Y2I1 1504 aa30.25■■■□□ 2.43
PCDHGB1-202ENST00000611598 SHROOM4Q9ULL8 1493 aa26.31■■□□□ 1.8
PCDHGB1-202ENST00000611598 SUPT5HO00267 1087 aaKnown RBP25.95■■□□□ 1.74
PCDHGB1-202ENST00000611598 ZCCHC6Q5VYS8 1495 aaKnown RBP25.67■■□□□ 1.7
PCDHGB1-202ENST00000611598 MYO15BQ96JP2 1530 aa25.46■■□□□ 1.67
PCDHGB1-202ENST00000611598 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
PCDHGB1-202ENST00000611598 CHIC1Q5VXU3 224 aa25.37■■□□□ 1.65
PCDHGB1-202ENST00000611598 HRCP23327 699 aa25.28■■□□□ 1.64
PCDHGB1-202ENST00000611598 DCAF8L2P0C7V8 631 aa25.14■■□□□ 1.62
PCDHGB1-202ENST00000611598 PCGF6Q9BYE7 350 aa25.05■■□□□ 1.6
PCDHGB1-202ENST00000611598 PPARGC1BQ86YN6 1023 aaKnown RBP24.83■■□□□ 1.57
PCDHGB1-202ENST00000611598 LOC105371045A0A1W2PR82 267 aa24.73■■□□□ 1.55
PCDHGB1-202ENST00000611598 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
PCDHGB1-202ENST00000611598 TRIM26Q12899 539 aaPredicted RBP24.38■■□□□ 1.49
PCDHGB1-202ENST00000611598 ABCC9O60706 1549 aa24.3■■□□□ 1.48
PCDHGB1-202ENST00000611598 RSF1Q96T23 1441 aaPredicted RBP24.15■■□□□ 1.46
PCDHGB1-202ENST00000611598 SCRIBQ14160 1630 aa24.08■■□□□ 1.45
PCDHGB1-202ENST00000611598 TRIM41Q8WV44 630 aa24.05■■□□□ 1.44
PCDHGB1-202ENST00000611598 FAM9AQ8IZU1 332 aaPredicted RBP24■■□□□ 1.43
PCDHGB1-202ENST00000611598 RB1CC1Q8TDY2 1594 aa24■■□□□ 1.43
PCDHGB1-202ENST00000611598 ZEB1P37275 1124 aaPredicted RBP23.94■■□□□ 1.42
PCDHGB1-202ENST00000611598 EHMT2Q96KQ7 1210 aa23.88■■□□□ 1.41
PCDHGB1-202ENST00000611598 CECR2Q9BXF3 1484 aa23.68■■□□□ 1.38
PCDHGB1-202ENST00000611598 SCAF1Q9H7N4 1312 aaKnown RBP23.62■■□□□ 1.37
PCDHGB1-202ENST00000611598 MROH2BQ7Z745 1585 aa23.61■■□□□ 1.37
PCDHGB1-202ENST00000611598 WIZO95785 1651 aa23.51■■□□□ 1.35
PCDHGB1-202ENST00000611598 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.44■■□□□ 1.34
PCDHGB1-202ENST00000611598 NACADO15069 1562 aa23.43■■□□□ 1.34
PCDHGB1-202ENST00000611598 PELP1Q8IZL8 1130 aaKnown RBP23.41■■□□□ 1.34
PCDHGB1-202ENST00000611598 CCER1Q8TC90 406 aaPredicted RBP23.34■■□□□ 1.33
PCDHGB1-202ENST00000611598 EIF4G1Q04637 1599 aaKnown RBP23.32■■□□□ 1.32
PCDHGB1-202ENST00000611598 BAZ1AQ9NRL2 1556 aaPredicted RBP23.32■■□□□ 1.32
PCDHGB1-202ENST00000611598 TTBK1Q5TCY1 1321 aaPredicted RBP23.2■■□□□ 1.31
PCDHGB1-202ENST00000611598 ACIN1Q9UKV3 1341 aaKnown RBP23.18■■□□□ 1.3
PCDHGB1-202ENST00000611598 NEUROD1Q13562 356 aa23.18■■□□□ 1.3
PCDHGB1-202ENST00000611598 ABCC8Q09428 1581 aa23.18■■□□□ 1.3
PCDHGB1-202ENST00000611598 CCDC88BA6NC98 1476 aa23.15■■□□□ 1.3
PCDHGB1-202ENST00000611598 DIEXFQ68CQ4 756 aaKnown RBP23.1■■□□□ 1.29
PCDHGB1-202ENST00000611598 WRNQ14191 1432 aaPredicted RBP eCLIP23.1■■□□□ 1.29
PCDHGB1-202ENST00000611598 CEP162Q5TB80 1403 aa23.09■■□□□ 1.29
PCDHGB1-202ENST00000611598 TOP2AP11388 1531 aaKnown RBP23.06■■□□□ 1.28
PCDHGB1-202ENST00000611598 SOGA1O94964 1423 aa23.04■■□□□ 1.28
PCDHGB1-202ENST00000611598 SMARCA2P51531 1590 aa22.98■■□□□ 1.27
PCDHGB1-202ENST00000611598 GTF3C3Q9Y5Q9 886 aa22.97■■□□□ 1.27
PCDHGB1-202ENST00000611598 TNIKQ9UKE5 1360 aa22.96■■□□□ 1.27
PCDHGB1-202ENST00000611598 SMARCA4P51532 1647 aa22.96■■□□□ 1.27
PCDHGB1-202ENST00000611598 RUSC2Q8N2Y8 1516 aa22.93■■□□□ 1.26
PCDHGB1-202ENST00000611598 CENPBP07199 599 aaPredicted RBP22.92■■□□□ 1.26
PCDHGB1-202ENST00000611598 CSRNP3Q8WYN3 585 aa22.88■■□□□ 1.25
PCDHGB1-202ENST00000611598 UBTFP17480 764 aaKnown RBP22.88■■□□□ 1.25
PCDHGB1-202ENST00000611598 UNC13AQ9UPW8 1703 aa22.83■■□□□ 1.25
PCDHGB1-202ENST00000611598 EEA1Q15075 1411 aa22.81■■□□□ 1.24
PCDHGB1-202ENST00000611598 ZNF316A6NFI3 1004 aaPredicted RBP22.8■■□□□ 1.24
PCDHGB1-202ENST00000611598 GOLGA3Q08378 1498 aa22.76■■□□□ 1.23
PCDHGB1-202ENST00000611598 YTHDC1Q96MU7 727 aaKnown RBP22.67■■□□□ 1.22
PCDHGB1-202ENST00000611598 HNRNPUL2Q1KMD3 747 aaKnown RBP22.67■■□□□ 1.22
PCDHGB1-202ENST00000611598 BICRAQ9NZM4 1560 aa22.66■■□□□ 1.22
PCDHGB1-202ENST00000611598 PABPN1Q86U42 306 aaKnown RBP eCLIP22.62■■□□□ 1.21
PCDHGB1-202ENST00000611598 MIER1Q8N108 512 aa22.6■■□□□ 1.21
PCDHGB1-202ENST00000611598 CEP164Q9UPV0 1460 aa22.57■■□□□ 1.2
PCDHGB1-202ENST00000611598 SYNJ1O43426 1573 aa22.56■■□□□ 1.2
PCDHGB1-202ENST00000611598 CLIP1P30622 1438 aa22.55■■□□□ 1.2
PCDHGB1-202ENST00000611598 KIF21BO75037 1637 aa22.53■■□□□ 1.2
PCDHGB1-202ENST00000611598 VPS8Q8N3P4 1428 aa22.49■■□□□ 1.19
PCDHGB1-202ENST00000611598 RANGAP1P46060 587 aaPredicted RBP22.44■■□□□ 1.18
PCDHGB1-202ENST00000611598 RAPGEF2Q9Y4G8 1499 aa22.44■■□□□ 1.18
PCDHGB1-202ENST00000611598 PEG3Q9GZU2 1588 aa22.42■■□□□ 1.18
PCDHGB1-202ENST00000611598 APLP2Q06481 763 aa22.39■■□□□ 1.17
PCDHGB1-202ENST00000611598 BAZ1BQ9UIG0 1483 aaKnown RBP22.37■■□□□ 1.17
PCDHGB1-202ENST00000611598 ATAD2BQ9ULI0 1458 aa22.28■■□□□ 1.16
PCDHGB1-202ENST00000611598 MYT1Q01538 1121 aa22.27■■□□□ 1.16
PCDHGB1-202ENST00000611598 DHX57Q6P158 1386 aaKnown RBP22.22■■□□□ 1.15
PCDHGB1-202ENST00000611598 TOP2BQ02880 1626 aa22.18■■□□□ 1.14
PCDHGB1-202ENST00000611598 ARAP1Q96P48 1450 aa22.16■■□□□ 1.14
PCDHGB1-202ENST00000611598 KANK4Q5T7N3 995 aaPredicted RBP22.16■■□□□ 1.14
PCDHGB1-202ENST00000611598 CLSPNQ9HAW4 1339 aa22.15■■□□□ 1.14
PCDHGB1-202ENST00000611598 PRXQ9BXM0 1461 aa22.1■■□□□ 1.13
PCDHGB1-202ENST00000611598 ERICH3Q5RHP9 1530 aa22.08■■□□□ 1.12
PCDHGB1-202ENST00000611598 BIVM-ERCC5R4GMW8 1640 aa22.07■■□□□ 1.12
PCDHGB1-202ENST00000611598 SUPT16HQ9Y5B9 1047 aaKnown RBP22.02■■□□□ 1.12
PCDHGB1-202ENST00000611598 RRBP1Q9P2E9 1410 aaKnown RBP22.01■■□□□ 1.11
PCDHGB1-202ENST00000611598 CUX1P39880 1505 aa21.94■■□□□ 1.1
PCDHGB1-202ENST00000611598 ITGAEP38570 1179 aa21.94■■□□□ 1.1
PCDHGB1-202ENST00000611598 CUX2O14529 1486 aa21.93■■□□□ 1.1
PCDHGB1-202ENST00000611598 CCNB3Q8WWL7 1395 aa21.92■■□□□ 1.1
PCDHGB1-202ENST00000611598 ARHGAP35Q9NRY4 1499 aa21.89■■□□□ 1.1
PCDHGB1-202ENST00000611598 KIF27Q86VH2 1401 aa21.89■■□□□ 1.09
PCDHGB1-202ENST00000611598 KCNH8Q96L42 1107 aa21.86■■□□□ 1.09
PCDHGB1-202ENST00000611598 RAB3GAP2Q9H2M9 1393 aa21.81■■□□□ 1.08
PCDHGB1-202ENST00000611598 MAPKBP1O60336 1514 aa21.8■■□□□ 1.08
PCDHGB1-202ENST00000611598 CC2D2AQ9P2K1 1620 aa21.78■■□□□ 1.08
PCDHGB1-202ENST00000611598 TSHZ2Q9NRE2 1034 aa21.77■■□□□ 1.08
PCDHGB1-202ENST00000611598 HMGXB3Q12766 1538 aa21.73■■□□□ 1.07
PCDHGB1-202ENST00000611598 NCAPD3P42695 1498 aa21.72■■□□□ 1.07
PCDHGB1-202ENST00000611598 CFTRP13569 1480 aa21.7■■□□□ 1.06
PCDHGB1-202ENST00000611598 TIAM1Q13009 1591 aa21.69■■□□□ 1.06
PCDHGB1-202ENST00000611598 SETD5Q9C0A6 1442 aa21.66■■□□□ 1.06
PCDHGB1-202ENST00000611598 SIN3AQ96ST3 1273 aa21.66■■□□□ 1.06
PCDHGB1-202ENST00000611598 IGF1RP08069 1367 aa21.66■■□□□ 1.06
PCDHGB1-202ENST00000611598 WDR97A6NE52 1622 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms