RNA–Protein interactions for RNA: ENST00000369448.3

FAM46C-201, Transcript of Putative nucleotidyltransferase FAM46C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM46C, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM46C-201ENST00000369448 NISCHQ9Y2I1 1504 aa25.64■■□□□ 1.7
FAM46C-201ENST00000369448 DCAF8L2P0C7V8 631 aa25.49■■□□□ 1.67
FAM46C-201ENST00000369448 SUPT5HO00267 1087 aaKnown RBP25■■□□□ 1.59
FAM46C-201ENST00000369448 SHROOM4Q9ULL8 1493 aa24.64■■□□□ 1.53
FAM46C-201ENST00000369448 EHMT2Q96KQ7 1210 aa23.92■■□□□ 1.42
FAM46C-201ENST00000369448 PCGF6Q9BYE7 350 aa23.81■■□□□ 1.4
FAM46C-201ENST00000369448 FAM9AQ8IZU1 332 aaPredicted RBP23.48■■□□□ 1.35
FAM46C-201ENST00000369448 TTBK1Q5TCY1 1321 aaPredicted RBP23.17■■□□□ 1.3
FAM46C-201ENST00000369448 ZEB1P37275 1124 aaPredicted RBP23.08■■□□□ 1.29
FAM46C-201ENST00000369448 TRIM41Q8WV44 630 aa23.07■■□□□ 1.28
FAM46C-201ENST00000369448 APLP2Q06481 763 aa23.03■■□□□ 1.28
FAM46C-201ENST00000369448 PELP1Q8IZL8 1130 aaKnown RBP23.03■■□□□ 1.28
FAM46C-201ENST00000369448 HRCP23327 699 aa23■■□□□ 1.27
FAM46C-201ENST00000369448 CCER1Q8TC90 406 aaPredicted RBP22.93■■□□□ 1.26
FAM46C-201ENST00000369448 CENPBP07199 599 aaPredicted RBP22.87■■□□□ 1.25
FAM46C-201ENST00000369448 CHIC1Q5VXU3 224 aa22.81■■□□□ 1.24
FAM46C-201ENST00000369448 TRIM26Q12899 539 aaPredicted RBP22.77■■□□□ 1.24
FAM46C-201ENST00000369448 LOC105371045A0A1W2PR82 267 aa22.74■■□□□ 1.23
FAM46C-201ENST00000369448 PPARGC1BQ86YN6 1023 aaKnown RBP22.71■■□□□ 1.23
FAM46C-201ENST00000369448 RANGAP1P46060 587 aaPredicted RBP22.66■■□□□ 1.22
FAM46C-201ENST00000369448 UBTFP17480 764 aaKnown RBP22.56■■□□□ 1.2
FAM46C-201ENST00000369448 YTHDC1Q96MU7 727 aaKnown RBP22.52■■□□□ 1.2
FAM46C-201ENST00000369448 ATP1B4Q9UN42 357 aaPredicted RBP22.18■■□□□ 1.14
FAM46C-201ENST00000369448 MYT1Q01538 1121 aa22.15■■□□□ 1.14
FAM46C-201ENST00000369448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.11■■□□□ 1.13
FAM46C-201ENST00000369448 ERICH6Q7L0X2 663 aa22.11■■□□□ 1.13
FAM46C-201ENST00000369448 NEFLP07196 543 aa22.03■■□□□ 1.12
FAM46C-201ENST00000369448 HNRNPUL2Q1KMD3 747 aaKnown RBP22.02■■□□□ 1.12
FAM46C-201ENST00000369448 DIEXFQ68CQ4 756 aaKnown RBP21.97■■□□□ 1.11
FAM46C-201ENST00000369448 ITGAEP38570 1179 aa21.88■■□□□ 1.09
FAM46C-201ENST00000369448 GTF3C3Q9Y5Q9 886 aa21.72■■□□□ 1.07
FAM46C-201ENST00000369448 ACIN1Q9UKV3 1341 aaKnown RBP21.52■■□□□ 1.04
FAM46C-201ENST00000369448 ZNF316A6NFI3 1004 aaPredicted RBP21.46■■□□□ 1.03
FAM46C-201ENST00000369448 DCAF1Q9Y4B6 1507 aa21.46■■□□□ 1.03
FAM46C-201ENST00000369448 POLR3GLQ9BT43 218 aa21.39■■□□□ 1.02
FAM46C-201ENST00000369448 CNGB1Q14028 1251 aaPredicted RBP21.36■■□□□ 1.01
FAM46C-201ENST00000369448 ZCCHC6Q5VYS8 1495 aaKnown RBP21.36■■□□□ 1.01
FAM46C-201ENST00000369448 MYO15BQ96JP2 1530 aa21.34■■□□□ 1.01
FAM46C-201ENST00000369448 ABCC9O60706 1549 aa21.33■■□□□ 1.01
FAM46C-201ENST00000369448 BCANQ96GW7 911 aa21.31■■□□□ 1
FAM46C-201ENST00000369448 FAM50AQ14320 339 aaKnown RBP21.29■■□□□ 1
FAM46C-201ENST00000369448 PABPN1Q86U42 306 aaKnown RBP eCLIP21.28■■□□□ 1
FAM46C-201ENST00000369448 NEUROD1Q13562 356 aa21.27■■□□□ 1
FAM46C-201ENST00000369448 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
FAM46C-201ENST00000369448 SCAF1Q9H7N4 1312 aaKnown RBP21.19■□□□□ 0.98
FAM46C-201ENST00000369448 DAXXQ9UER7 740 aaPredicted RBP21.09■□□□□ 0.97
FAM46C-201ENST00000369448 ANP32CO43423 234 aa21.07■□□□□ 0.96
FAM46C-201ENST00000369448 TRIM52Q96A61 297 aa21.02■□□□□ 0.96
FAM46C-201ENST00000369448 SCRIBQ14160 1630 aa20.97■□□□□ 0.95
FAM46C-201ENST00000369448 RTL5Q5HYW3 569 aaPredicted RBP20.93■□□□□ 0.94
FAM46C-201ENST00000369448 CDK11AQ9UQ88 783 aaPredicted RBP20.91■□□□□ 0.94
FAM46C-201ENST00000369448 MIER1Q8N108 512 aa20.87■□□□□ 0.93
FAM46C-201ENST00000369448 P3H3Q8IVL6 736 aa20.87■□□□□ 0.93
FAM46C-201ENST00000369448 MYT1LQ9UL68 1186 aa20.83■□□□□ 0.92
FAM46C-201ENST00000369448 FKBP8Q14318 412 aa20.82■□□□□ 0.92
FAM46C-201ENST00000369448 ZNF326Q5BKZ1 582 aaKnown RBP20.79■□□□□ 0.92
FAM46C-201ENST00000369448 DDX10Q13206 875 aaKnown RBP20.76■□□□□ 0.91
FAM46C-201ENST00000369448 CLSPNQ9HAW4 1339 aa20.76■□□□□ 0.91
FAM46C-201ENST00000369448 RSF1Q96T23 1441 aaPredicted RBP20.75■□□□□ 0.91
FAM46C-201ENST00000369448 CCDC180Q9P1Z9 1646 aa20.74■□□□□ 0.91
FAM46C-201ENST00000369448 SLC4A1APQ9BWU0 796 aaKnown RBP20.63■□□□□ 0.89
FAM46C-201ENST00000369448 ARID3CA6NKF2 412 aa20.61■□□□□ 0.89
FAM46C-201ENST00000369448 HNRNPUQ00839 825 aaKnown RBP eCLIP20.61■□□□□ 0.89
FAM46C-201ENST00000369448 CEP162Q5TB80 1403 aa20.59■□□□□ 0.89
FAM46C-201ENST00000369448 TONSLQ96HA7 1378 aa20.58■□□□□ 0.88
FAM46C-201ENST00000369448 CLIP1P30622 1438 aa20.56■□□□□ 0.88
FAM46C-201ENST00000369448 HIRIP3Q9BW71 556 aaPredicted RBP20.52■□□□□ 0.87
FAM46C-201ENST00000369448 ANP32AP39687 249 aaKnown RBP20.49■□□□□ 0.87
FAM46C-201ENST00000369448 FAM9BQ8IZU0 186 aa20.49■□□□□ 0.87
FAM46C-201ENST00000369448 NPM2Q86SE8 214 aaKnown RBP20.43■□□□□ 0.86
FAM46C-201ENST00000369448 TNIKQ9UKE5 1360 aa20.41■□□□□ 0.86
FAM46C-201ENST00000369448 GOLGA3Q08378 1498 aa20.4■□□□□ 0.86
FAM46C-201ENST00000369448 IRX6P78412 446 aaPredicted RBP20.39■□□□□ 0.86
FAM46C-201ENST00000369448 FBLN2P98095 1184 aa20.39■□□□□ 0.86
FAM46C-201ENST00000369448 EEA1Q15075 1411 aa20.39■□□□□ 0.85
FAM46C-201ENST00000369448 ZNF777Q9ULD5 760 aaPredicted RBP20.39■□□□□ 0.85
FAM46C-201ENST00000369448 CHIC2Q9UKJ5 165 aa20.37■□□□□ 0.85
FAM46C-201ENST00000369448 RB1CC1Q8TDY2 1594 aa20.3■□□□□ 0.84
FAM46C-201ENST00000369448 MRS2Q9HD23 443 aa20.29■□□□□ 0.84
FAM46C-201ENST00000369448 SALL2Q9Y467 1007 aaPredicted RBP20.28■□□□□ 0.84
FAM46C-201ENST00000369448 WRNQ14191 1432 aaPredicted RBP eCLIP20.28■□□□□ 0.84
FAM46C-201ENST00000369448 CCDC136Q96JN2 1154 aa20.26■□□□□ 0.83
FAM46C-201ENST00000369448 CANXP27824 592 aaKnown RBP20.26■□□□□ 0.83
FAM46C-201ENST00000369448 NBR1Q14596 966 aa20.25■□□□□ 0.83
FAM46C-201ENST00000369448 CECR2Q9BXF3 1484 aa20.24■□□□□ 0.83
FAM46C-201ENST00000369448 SUPT16HQ9Y5B9 1047 aaKnown RBP20.23■□□□□ 0.83
FAM46C-201ENST00000369448 TMC1Q8TDI8 760 aa20.21■□□□□ 0.83
FAM46C-201ENST00000369448 ANP32EQ9BTT0 268 aa20.2■□□□□ 0.82
FAM46C-201ENST00000369448 MTUS2Q5JR59 1369 aa20.2■□□□□ 0.82
FAM46C-201ENST00000369448 SOGA1O94964 1423 aa20.19■□□□□ 0.82
FAM46C-201ENST00000369448 CEP164Q9UPV0 1460 aa20.19■□□□□ 0.82
FAM46C-201ENST00000369448 SIN3AQ96ST3 1273 aa20.16■□□□□ 0.82
FAM46C-201ENST00000369448 ZBTB47Q9UFB7 747 aaPredicted RBP20.16■□□□□ 0.82
FAM46C-201ENST00000369448 EIF4G2P78344 907 aaKnown RBP eCLIP20.16■□□□□ 0.82
FAM46C-201ENST00000369448 RRP7BPQ9NSQ0 103 aa20.15■□□□□ 0.82
FAM46C-201ENST00000369448 BCL11AQ9H165 835 aa20.13■□□□□ 0.81
FAM46C-201ENST00000369448 KDM2AQ9Y2K7 1162 aa20.07■□□□□ 0.8
FAM46C-201ENST00000369448 SENP3-EIF4A1A0A087X0R7 540 aa20.05■□□□□ 0.8
FAM46C-201ENST00000369448 EIF5BO60841 1220 aaKnown RBP20.04■□□□□ 0.8
FAM46C-201ENST00000369448 NACADO15069 1562 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms