RNA–Protein interactions for RNA: ENST00000253693.6

CAPN7-201, Transcript of calpain 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN7, Length 4,353 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-201ENST00000253693 NISCHQ9Y2I1 1504 aa30.42■■■□□ 2.46
CAPN7-201ENST00000253693 DCAF8L2P0C7V8 631 aa27■■□□□ 1.91
CAPN7-201ENST00000253693 SHROOM4Q9ULL8 1493 aa26.7■■□□□ 1.86
CAPN7-201ENST00000253693 SUPT5HO00267 1087 aaKnown RBP26.41■■□□□ 1.82
CAPN7-201ENST00000253693 CCDC180Q9P1Z9 1646 aa25.65■■□□□ 1.7
CAPN7-201ENST00000253693 ZCCHC6Q5VYS8 1495 aaKnown RBP25.53■■□□□ 1.68
CAPN7-201ENST00000253693 CHIC1Q5VXU3 224 aa24.9■■□□□ 1.58
CAPN7-201ENST00000253693 ABCC9O60706 1549 aa24.85■■□□□ 1.57
CAPN7-201ENST00000253693 DCAF1Q9Y4B6 1507 aa24.68■■□□□ 1.54
CAPN7-201ENST00000253693 TRIM41Q8WV44 630 aa24.62■■□□□ 1.53
CAPN7-201ENST00000253693 FAM9AQ8IZU1 332 aaPredicted RBP24.55■■□□□ 1.52
CAPN7-201ENST00000253693 EHMT2Q96KQ7 1210 aa24.54■■□□□ 1.52
CAPN7-201ENST00000253693 SCRIBQ14160 1630 aa24.51■■□□□ 1.51
CAPN7-201ENST00000253693 PCGF6Q9BYE7 350 aa24.49■■□□□ 1.51
CAPN7-201ENST00000253693 LOC105371045A0A1W2PR82 267 aa24.33■■□□□ 1.49
CAPN7-201ENST00000253693 NACADO15069 1562 aa24.15■■□□□ 1.46
CAPN7-201ENST00000253693 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
CAPN7-201ENST00000253693 MYO15BQ96JP2 1530 aa24.06■■□□□ 1.44
CAPN7-201ENST00000253693 PABPN1Q86U42 306 aaKnown RBP eCLIP24.02■■□□□ 1.44
CAPN7-201ENST00000253693 RB1CC1Q8TDY2 1594 aa23.96■■□□□ 1.43
CAPN7-201ENST00000253693 TRIM26Q12899 539 aaPredicted RBP23.95■■□□□ 1.42
CAPN7-201ENST00000253693 HRCP23327 699 aa23.95■■□□□ 1.42
CAPN7-201ENST00000253693 CECR2Q9BXF3 1484 aa23.8■■□□□ 1.4
CAPN7-201ENST00000253693 UBTFP17480 764 aaKnown RBP23.75■■□□□ 1.39
CAPN7-201ENST00000253693 ZEB1P37275 1124 aaPredicted RBP23.73■■□□□ 1.39
CAPN7-201ENST00000253693 TTBK1Q5TCY1 1321 aaPredicted RBP23.69■■□□□ 1.38
CAPN7-201ENST00000253693 APLP2Q06481 763 aa23.66■■□□□ 1.38
CAPN7-201ENST00000253693 PPARGC1BQ86YN6 1023 aaKnown RBP23.63■■□□□ 1.37
CAPN7-201ENST00000253693 MROH2BQ7Z745 1585 aa23.62■■□□□ 1.37
CAPN7-201ENST00000253693 BAZ1AQ9NRL2 1556 aaPredicted RBP23.55■■□□□ 1.36
CAPN7-201ENST00000253693 RANGAP1P46060 587 aaPredicted RBP23.48■■□□□ 1.35
CAPN7-201ENST00000253693 CCER1Q8TC90 406 aaPredicted RBP23.45■■□□□ 1.34
CAPN7-201ENST00000253693 WIZO95785 1651 aa23.39■■□□□ 1.33
CAPN7-201ENST00000253693 CSRNP3Q8WYN3 585 aa23.29■■□□□ 1.32
CAPN7-201ENST00000253693 CCDC88BA6NC98 1476 aa23.16■■□□□ 1.3
CAPN7-201ENST00000253693 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
CAPN7-201ENST00000253693 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
CAPN7-201ENST00000253693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.07■■□□□ 1.28
CAPN7-201ENST00000253693 BAZ1BQ9UIG0 1483 aaKnown RBP23.05■■□□□ 1.28
CAPN7-201ENST00000253693 ABCC8Q09428 1581 aa23■■□□□ 1.27
CAPN7-201ENST00000253693 WRNQ14191 1432 aaPredicted RBP eCLIP22.99■■□□□ 1.27
CAPN7-201ENST00000253693 EEA1Q15075 1411 aa22.99■■□□□ 1.27
CAPN7-201ENST00000253693 HNRNPUL2Q1KMD3 747 aaKnown RBP22.94■■□□□ 1.26
CAPN7-201ENST00000253693 ATP1B4Q9UN42 357 aaPredicted RBP22.91■■□□□ 1.26
CAPN7-201ENST00000253693 SOGA1O94964 1423 aa22.89■■□□□ 1.26
CAPN7-201ENST00000253693 SMARCA2P51531 1590 aa22.86■■□□□ 1.25
CAPN7-201ENST00000253693 CEP162Q5TB80 1403 aa22.84■■□□□ 1.25
CAPN7-201ENST00000253693 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
CAPN7-201ENST00000253693 ATAD2BQ9ULI0 1458 aa22.81■■□□□ 1.24
CAPN7-201ENST00000253693 GOLGA3Q08378 1498 aa22.8■■□□□ 1.24
CAPN7-201ENST00000253693 CENPBP07199 599 aaPredicted RBP22.69■■□□□ 1.22
CAPN7-201ENST00000253693 CLIP1P30622 1438 aa22.68■■□□□ 1.22
CAPN7-201ENST00000253693 BICRAQ9NZM4 1560 aa22.68■■□□□ 1.22
CAPN7-201ENST00000253693 CEP164Q9UPV0 1460 aa22.67■■□□□ 1.22
CAPN7-201ENST00000253693 UNC13AQ9UPW8 1703 aa22.66■■□□□ 1.22
CAPN7-201ENST00000253693 ITGAEP38570 1179 aa22.65■■□□□ 1.22
CAPN7-201ENST00000253693 RUSC2Q8N2Y8 1516 aa22.59■■□□□ 1.21
CAPN7-201ENST00000253693 DIEXFQ68CQ4 756 aaKnown RBP22.56■■□□□ 1.2
CAPN7-201ENST00000253693 KIF27Q86VH2 1401 aa22.48■■□□□ 1.19
CAPN7-201ENST00000253693 P3H3Q8IVL6 736 aa22.39■■□□□ 1.18
CAPN7-201ENST00000253693 YTHDC1Q96MU7 727 aaKnown RBP22.39■■□□□ 1.17
CAPN7-201ENST00000253693 NCAPD3P42695 1498 aa22.37■■□□□ 1.17
CAPN7-201ENST00000253693 FAM50AQ14320 339 aaKnown RBP22.37■■□□□ 1.17
CAPN7-201ENST00000253693 PEG3Q9GZU2 1588 aa22.36■■□□□ 1.17
CAPN7-201ENST00000253693 ZNF316A6NFI3 1004 aaPredicted RBP22.36■■□□□ 1.17
CAPN7-201ENST00000253693 EIF4G1Q04637 1599 aaKnown RBP22.36■■□□□ 1.17
CAPN7-201ENST00000253693 SYNJ1O43426 1573 aa22.32■■□□□ 1.16
CAPN7-201ENST00000253693 RAPGEF2Q9Y4G8 1499 aa22.31■■□□□ 1.16
CAPN7-201ENST00000253693 VPS8Q8N3P4 1428 aa22.31■■□□□ 1.16
CAPN7-201ENST00000253693 CADPSQ9ULU8 1353 aa22.25■■□□□ 1.15
CAPN7-201ENST00000253693 CUX2O14529 1486 aa22.25■■□□□ 1.15
CAPN7-201ENST00000253693 HMGXB3Q12766 1538 aa22.18■■□□□ 1.14
CAPN7-201ENST00000253693 CARMIL1Q5VZK9 1371 aa22.15■■□□□ 1.14
CAPN7-201ENST00000253693 PELP1Q8IZL8 1130 aaKnown RBP22.12■■□□□ 1.13
CAPN7-201ENST00000253693 KIF21BO75037 1637 aa22.11■■□□□ 1.13
CAPN7-201ENST00000253693 CFTRP13569 1480 aa22.11■■□□□ 1.13
CAPN7-201ENST00000253693 TOP2BQ02880 1626 aa22.09■■□□□ 1.13
CAPN7-201ENST00000253693 NEUROD1Q13562 356 aa22.06■■□□□ 1.12
CAPN7-201ENST00000253693 KANK4Q5T7N3 995 aaPredicted RBP22.05■■□□□ 1.12
CAPN7-201ENST00000253693 ACIN1Q9UKV3 1341 aaKnown RBP22.01■■□□□ 1.11
CAPN7-201ENST00000253693 CUX1P39880 1505 aa21.99■■□□□ 1.11
CAPN7-201ENST00000253693 FANCD2Q9BXW9 1451 aa21.98■■□□□ 1.11
CAPN7-201ENST00000253693 FHAD1B1AJZ9 1412 aa21.94■■□□□ 1.1
CAPN7-201ENST00000253693 IGF1RP08069 1367 aa21.93■■□□□ 1.1
CAPN7-201ENST00000253693 CCNB3Q8WWL7 1395 aa21.93■■□□□ 1.1
CAPN7-201ENST00000253693 FGD5Q6ZNL6 1462 aa21.93■■□□□ 1.1
CAPN7-201ENST00000253693 PRXQ9BXM0 1461 aa21.92■■□□□ 1.1
CAPN7-201ENST00000253693 ARID3CA6NKF2 412 aa21.91■■□□□ 1.1
CAPN7-201ENST00000253693 ERICH3Q5RHP9 1530 aa21.91■■□□□ 1.1
CAPN7-201ENST00000253693 MTUS2Q5JR59 1369 aa21.91■■□□□ 1.1
CAPN7-201ENST00000253693 CLSPNQ9HAW4 1339 aa21.91■■□□□ 1.1
CAPN7-201ENST00000253693 GTF3C3Q9Y5Q9 886 aa21.9■■□□□ 1.1
CAPN7-201ENST00000253693 TRIM52Q96A61 297 aa21.9■■□□□ 1.1
CAPN7-201ENST00000253693 FBLN2P98095 1184 aa21.89■■□□□ 1.1
CAPN7-201ENST00000253693 CC2D2AQ9P2K1 1620 aa21.89■■□□□ 1.09
CAPN7-201ENST00000253693 PDS5BQ9NTI5 1447 aa21.87■■□□□ 1.09
CAPN7-201ENST00000253693 TDRD9Q8NDG6 1382 aaKnown RBP21.84■■□□□ 1.09
CAPN7-201ENST00000253693 BIVM-ERCC5R4GMW8 1640 aa21.81■■□□□ 1.08
CAPN7-201ENST00000253693 MIER1Q8N108 512 aa21.79■■□□□ 1.08
CAPN7-201ENST00000253693 RAD54L2Q9Y4B4 1467 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms