RNA–Protein interactions for RNA: ENST00000636359.1

AC004840.1-201, humanhuman

BASIC

Gene AC004840.1, Length 365 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004840.1-201ENST00000636359 NISCHQ9Y2I1 1504 aa39.33■■■■□ 3.89
AC004840.1-201ENST00000636359 CCDC180Q9P1Z9 1646 aa35.16■■■■□ 3.22
AC004840.1-201ENST00000636359 ABCC9O60706 1549 aa34.55■■■■□ 3.12
AC004840.1-201ENST00000636359 RB1CC1Q8TDY2 1594 aa33.12■■■□□ 2.89
AC004840.1-201ENST00000636359 NACADO15069 1562 aa33■■■□□ 2.87
AC004840.1-201ENST00000636359 DCAF8L2P0C7V8 631 aa32.83■■■□□ 2.85
AC004840.1-201ENST00000636359 ZCCHC6Q5VYS8 1495 aaKnown RBP32.73■■■□□ 2.83
AC004840.1-201ENST00000636359 MYO15BQ96JP2 1530 aa32.69■■■□□ 2.82
AC004840.1-201ENST00000636359 UNC13AQ9UPW8 1703 aa32.65■■■□□ 2.82
AC004840.1-201ENST00000636359 DCAF1Q9Y4B6 1507 aa32.5■■■□□ 2.79
AC004840.1-201ENST00000636359 BICRAQ9NZM4 1560 aa32.24■■■□□ 2.75
AC004840.1-201ENST00000636359 PABPN1Q86U42 306 aaKnown RBP eCLIP32.19■■■□□ 2.74
AC004840.1-201ENST00000636359 SCRIBQ14160 1630 aa32.06■■■□□ 2.72
AC004840.1-201ENST00000636359 DNAJC5BQ9UF47 199 aa31.93■■■□□ 2.7
AC004840.1-201ENST00000636359 SHROOM4Q9ULL8 1493 aa31.67■■■□□ 2.66
AC004840.1-201ENST00000636359 EIF4G1Q04637 1599 aaKnown RBP31.34■■■□□ 2.61
AC004840.1-201ENST00000636359 CC2D2AQ9P2K1 1620 aa31.3■■■□□ 2.6
AC004840.1-201ENST00000636359 CECR2Q9BXF3 1484 aa31.02■■■□□ 2.56
AC004840.1-201ENST00000636359 SMARCA4P51532 1647 aa30.63■■■□□ 2.49
AC004840.1-201ENST00000636359 BAZ1AQ9NRL2 1556 aaPredicted RBP30.48■■■□□ 2.47
AC004840.1-201ENST00000636359 ATAD2BQ9ULI0 1458 aa30.44■■■□□ 2.46
AC004840.1-201ENST00000636359 NCAPD3P42695 1498 aa30.42■■■□□ 2.46
AC004840.1-201ENST00000636359 SMARCA2P51531 1590 aa30.37■■■□□ 2.45
AC004840.1-201ENST00000636359 MROH2BQ7Z745 1585 aa30.36■■■□□ 2.45
AC004840.1-201ENST00000636359 PEG3Q9GZU2 1588 aa30.3■■■□□ 2.44
AC004840.1-201ENST00000636359 HMGXB3Q12766 1538 aa30.3■■■□□ 2.44
AC004840.1-201ENST00000636359 BAZ1BQ9UIG0 1483 aaKnown RBP30.15■■■□□ 2.42
AC004840.1-201ENST00000636359 WIZO95785 1651 aa30.1■■■□□ 2.41
AC004840.1-201ENST00000636359 NESP48681 1621 aa29.88■■■□□ 2.37
AC004840.1-201ENST00000636359 RSF1Q96T23 1441 aaPredicted RBP29.85■■■□□ 2.37
AC004840.1-201ENST00000636359 LAMC3Q9Y6N6 1575 aa29.72■■■□□ 2.35
AC004840.1-201ENST00000636359 ERCC6Q03468 1493 aa29.71■■■□□ 2.35
AC004840.1-201ENST00000636359 TOP2AP11388 1531 aaKnown RBP29.66■■■□□ 2.34
AC004840.1-201ENST00000636359 KIF21AQ7Z4S6 1674 aa29.63■■■□□ 2.33
AC004840.1-201ENST00000636359 THOC2Q8NI27 1593 aaKnown RBP29.52■■■□□ 2.32
AC004840.1-201ENST00000636359 CADPSQ9ULU8 1353 aa29.5■■■□□ 2.31
AC004840.1-201ENST00000636359 CUX2O14529 1486 aa29.49■■■□□ 2.31
AC004840.1-201ENST00000636359 PDS5BQ9NTI5 1447 aa29.41■■■□□ 2.3
AC004840.1-201ENST00000636359 PRDM2Q13029 1718 aa29.32■■■□□ 2.28
AC004840.1-201ENST00000636359 CFTRP13569 1480 aa29.31■■■□□ 2.28
AC004840.1-201ENST00000636359 CCDC88BA6NC98 1476 aa29.29■■■□□ 2.28
AC004840.1-201ENST00000636359 FANCD2Q9BXW9 1451 aa29.21■■■□□ 2.27
AC004840.1-201ENST00000636359 MRC2Q9UBG0 1479 aa29.19■■■□□ 2.26
AC004840.1-201ENST00000636359 CEP164Q9UPV0 1460 aa29.18■■■□□ 2.26
AC004840.1-201ENST00000636359 WDR62O43379 1518 aa29.15■■■□□ 2.26
AC004840.1-201ENST00000636359 URB2Q14146 1524 aaKnown RBP28.99■■■□□ 2.23
AC004840.1-201ENST00000636359 SUPT5HO00267 1087 aaKnown RBP28.87■■■□□ 2.21
AC004840.1-201ENST00000636359 DNAJC5Q9H3Z4 198 aa28.83■■■□□ 2.21
AC004840.1-201ENST00000636359 TOPBP1Q92547 1522 aa28.75■■■□□ 2.19
AC004840.1-201ENST00000636359 DNMBPQ6XZF7 1577 aa28.71■■■□□ 2.19
AC004840.1-201ENST00000636359 ABCC8Q09428 1581 aa28.63■■■□□ 2.17
AC004840.1-201ENST00000636359 IFT140Q96RY7 1462 aa28.55■■■□□ 2.16
AC004840.1-201ENST00000636359 ZNF608Q9ULD9 1512 aaPredicted RBP28.54■■■□□ 2.16
AC004840.1-201ENST00000636359 TARBP1Q13395 1621 aaKnown RBP28.53■■■□□ 2.16
AC004840.1-201ENST00000636359 POLA1P09884 1462 aaPredicted RBP28.49■■■□□ 2.15
AC004840.1-201ENST00000636359 CUX1P39880 1505 aa28.48■■■□□ 2.15
AC004840.1-201ENST00000636359 EIF4G3O43432 1585 aaKnown RBP28.47■■■□□ 2.15
AC004840.1-201ENST00000636359 FGD5Q6ZNL6 1462 aa28.39■■■□□ 2.13
AC004840.1-201ENST00000636359 RAD54L2Q9Y4B4 1467 aa28.39■■■□□ 2.13
AC004840.1-201ENST00000636359 WDR97A6NE52 1622 aa28.32■■■□□ 2.12
AC004840.1-201ENST00000636359 AQRO60306 1485 aaKnown RBP eCLIP28.31■■■□□ 2.12
AC004840.1-201ENST00000636359 SOGA1O94964 1423 aa28.3■■■□□ 2.12
AC004840.1-201ENST00000636359 CHD1O14646 1710 aa28.25■■■□□ 2.11
AC004840.1-201ENST00000636359 BIVM-ERCC5R4GMW8 1640 aa28.24■■■□□ 2.11
AC004840.1-201ENST00000636359 SYNJ1O43426 1573 aa28.21■■■□□ 2.11
AC004840.1-201ENST00000636359 TDRD9Q8NDG6 1382 aaKnown RBP28.19■■■□□ 2.1
AC004840.1-201ENST00000636359 TOP2BQ02880 1626 aa28.18■■■□□ 2.1
AC004840.1-201ENST00000636359 OSCARQ8IYS5 282 aa28.15■■■□□ 2.1
AC004840.1-201ENST00000636359 PBRM1Q86U86 1689 aa28.15■■■□□ 2.1
AC004840.1-201ENST00000636359 WRNQ14191 1432 aaPredicted RBP eCLIP28.11■■■□□ 2.09
AC004840.1-201ENST00000636359 ABCA5Q8WWZ7 1642 aa28.08■■■□□ 2.09
AC004840.1-201ENST00000636359 ABCA10Q8WWZ4 1543 aa28.07■■■□□ 2.08
AC004840.1-201ENST00000636359 SNAPC4Q5SXM2 1469 aa28.05■■■□□ 2.08
AC004840.1-201ENST00000636359 GRIN2BQ13224 1484 aa28.01■■■□□ 2.07
AC004840.1-201ENST00000636359 GAPVD1Q14C86 1478 aa27.99■■■□□ 2.07
AC004840.1-201ENST00000636359 MAGI1Q96QZ7 1491 aaPredicted RBP27.95■■■□□ 2.07
AC004840.1-201ENST00000636359 RIMBP3CA6NJZ7 1639 aa27.95■■■□□ 2.06
AC004840.1-201ENST00000636359 RIMBP3BA6NNM3 1639 aa27.95■■■□□ 2.06
AC004840.1-201ENST00000636359 RIMBP3Q9UFD9 1639 aa27.95■■■□□ 2.06
AC004840.1-201ENST00000636359 FBLN2P98095 1184 aa27.92■■■□□ 2.06
AC004840.1-201ENST00000636359 SYNJ2O15056 1496 aa27.86■■■□□ 2.05
AC004840.1-201ENST00000636359 ARHGEF11O15085 1522 aa27.84■■■□□ 2.05
AC004840.1-201ENST00000636359 CLASP1Q7Z460 1538 aa27.82■■■□□ 2.04
AC004840.1-201ENST00000636359 ADAMTS12P58397 1594 aa27.81■■■□□ 2.04
AC004840.1-201ENST00000636359 TRIM41Q8WV44 630 aa27.79■■■□□ 2.04
AC004840.1-201ENST00000636359 CHMP7Q8WUX9 453 aaPredicted RBP27.78■■■□□ 2.04
AC004840.1-201ENST00000636359 ERICH3Q5RHP9 1530 aa27.73■■■□□ 2.03
AC004840.1-201ENST00000636359 GRIN2AQ12879 1464 aa27.68■■■□□ 2.02
AC004840.1-201ENST00000636359 CEP170Q5SW79 1584 aa27.65■■■□□ 2.02
AC004840.1-201ENST00000636359 FHAD1B1AJZ9 1412 aa27.63■■■□□ 2.01
AC004840.1-201ENST00000636359 ARAP1Q96P48 1450 aa27.61■■■□□ 2.01
AC004840.1-201ENST00000636359 NUP160Q12769 1436 aa27.56■■■□□ 2
AC004840.1-201ENST00000636359 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
AC004840.1-201ENST00000636359 CUL7Q14999 1698 aa27.5■■□□□ 1.99
AC004840.1-201ENST00000636359 CYB5RLQ6IPT4 315 aa27.49■■□□□ 1.99
AC004840.1-201ENST00000636359 SHROOM2Q13796 1616 aa27.49■■□□□ 1.99
AC004840.1-201ENST00000636359 ERCC6L2Q5T890 1561 aa27.48■■□□□ 1.99
AC004840.1-201ENST00000636359 IGF1RP08069 1367 aa27.46■■□□□ 1.99
AC004840.1-201ENST00000636359 RUSC2Q8N2Y8 1516 aa27.42■■□□□ 1.98
AC004840.1-201ENST00000636359 CARMIL1Q5VZK9 1371 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms