RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 NISCHQ9Y2I1 1504 aa29.16■■■□□ 2.26
TOP3B-201ENST00000357179 HRCP23327 699 aa24.83■■□□□ 1.56
TOP3B-201ENST00000357179 SHROOM4Q9ULL8 1493 aa24.81■■□□□ 1.56
TOP3B-201ENST00000357179 ZCCHC6Q5VYS8 1495 aaKnown RBP24.75■■□□□ 1.55
TOP3B-201ENST00000357179 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
TOP3B-201ENST00000357179 SUPT5HO00267 1087 aaKnown RBP24.5■■□□□ 1.51
TOP3B-201ENST00000357179 PELP1Q8IZL8 1130 aaKnown RBP24.28■■□□□ 1.48
TOP3B-201ENST00000357179 PPARGC1BQ86YN6 1023 aaKnown RBP24.15■■□□□ 1.46
TOP3B-201ENST00000357179 PCGF6Q9BYE7 350 aa24.11■■□□□ 1.45
TOP3B-201ENST00000357179 CHIC1Q5VXU3 224 aa24.1■■□□□ 1.45
TOP3B-201ENST00000357179 DCAF1Q9Y4B6 1507 aa24.06■■□□□ 1.44
TOP3B-201ENST00000357179 MYO15BQ96JP2 1530 aa24.05■■□□□ 1.44
TOP3B-201ENST00000357179 DCAF8L2P0C7V8 631 aa23.78■■□□□ 1.4
TOP3B-201ENST00000357179 SCAF1Q9H7N4 1312 aaKnown RBP23.53■■□□□ 1.36
TOP3B-201ENST00000357179 MYT1Q01538 1121 aa23.42■■□□□ 1.34
TOP3B-201ENST00000357179 ABCC9O60706 1549 aa23.42■■□□□ 1.34
TOP3B-201ENST00000357179 TRIM26Q12899 539 aaPredicted RBP23.41■■□□□ 1.34
TOP3B-201ENST00000357179 ZEB1P37275 1124 aaPredicted RBP23.33■■□□□ 1.33
TOP3B-201ENST00000357179 LOC105371045A0A1W2PR82 267 aa23.27■■□□□ 1.32
TOP3B-201ENST00000357179 RSF1Q96T23 1441 aaPredicted RBP23.15■■□□□ 1.3
TOP3B-201ENST00000357179 SCRIBQ14160 1630 aa23.05■■□□□ 1.28
TOP3B-201ENST00000357179 RB1CC1Q8TDY2 1594 aa23.02■■□□□ 1.28
TOP3B-201ENST00000357179 ACIN1Q9UKV3 1341 aaKnown RBP22.94■■□□□ 1.26
TOP3B-201ENST00000357179 TRIM41Q8WV44 630 aa22.9■■□□□ 1.26
TOP3B-201ENST00000357179 NEUROD1Q13562 356 aa22.81■■□□□ 1.24
TOP3B-201ENST00000357179 NACADO15069 1562 aa22.78■■□□□ 1.24
TOP3B-201ENST00000357179 GTF3C3Q9Y5Q9 886 aa22.69■■□□□ 1.22
TOP3B-201ENST00000357179 CECR2Q9BXF3 1484 aa22.62■■□□□ 1.21
TOP3B-201ENST00000357179 MROH2BQ7Z745 1585 aa22.62■■□□□ 1.21
TOP3B-201ENST00000357179 CENPBP07199 599 aaPredicted RBP22.61■■□□□ 1.21
TOP3B-201ENST00000357179 FAM9AQ8IZU1 332 aaPredicted RBP22.57■■□□□ 1.2
TOP3B-201ENST00000357179 WIZO95785 1651 aa22.51■■□□□ 1.19
TOP3B-201ENST00000357179 BAZ1AQ9NRL2 1556 aaPredicted RBP22.5■■□□□ 1.19
TOP3B-201ENST00000357179 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
TOP3B-201ENST00000357179 DIEXFQ68CQ4 756 aaKnown RBP22.41■■□□□ 1.18
TOP3B-201ENST00000357179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.28■■□□□ 1.16
TOP3B-201ENST00000357179 CCER1Q8TC90 406 aaPredicted RBP22.26■■□□□ 1.15
TOP3B-201ENST00000357179 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
TOP3B-201ENST00000357179 EHMT2Q96KQ7 1210 aa22.25■■□□□ 1.15
TOP3B-201ENST00000357179 WRNQ14191 1432 aaPredicted RBP eCLIP22.21■■□□□ 1.15
TOP3B-201ENST00000357179 SMARCA4P51532 1647 aa22.14■■□□□ 1.14
TOP3B-201ENST00000357179 SMARCA2P51531 1590 aa22.11■■□□□ 1.13
TOP3B-201ENST00000357179 CCDC88BA6NC98 1476 aa22.1■■□□□ 1.13
TOP3B-201ENST00000357179 EEA1Q15075 1411 aa22.07■■□□□ 1.12
TOP3B-201ENST00000357179 ABCC8Q09428 1581 aa22.07■■□□□ 1.12
TOP3B-201ENST00000357179 TTBK1Q5TCY1 1321 aaPredicted RBP22.05■■□□□ 1.12
TOP3B-201ENST00000357179 TNIKQ9UKE5 1360 aa22.04■■□□□ 1.12
TOP3B-201ENST00000357179 CEP162Q5TB80 1403 aa22.03■■□□□ 1.12
TOP3B-201ENST00000357179 ZNF316A6NFI3 1004 aaPredicted RBP21.98■■□□□ 1.11
TOP3B-201ENST00000357179 YTHDC1Q96MU7 727 aaKnown RBP21.93■■□□□ 1.1
TOP3B-201ENST00000357179 UNC13AQ9UPW8 1703 aa21.93■■□□□ 1.1
TOP3B-201ENST00000357179 SOGA1O94964 1423 aa21.93■■□□□ 1.1
TOP3B-201ENST00000357179 CSRNP3Q8WYN3 585 aa21.88■■□□□ 1.09
TOP3B-201ENST00000357179 GOLGA3Q08378 1498 aa21.85■■□□□ 1.09
TOP3B-201ENST00000357179 MIER1Q8N108 512 aa21.81■■□□□ 1.08
TOP3B-201ENST00000357179 PEG3Q9GZU2 1588 aa21.79■■□□□ 1.08
TOP3B-201ENST00000357179 RUSC2Q8N2Y8 1516 aa21.78■■□□□ 1.08
TOP3B-201ENST00000357179 BCL11AQ9H165 835 aa21.75■■□□□ 1.07
TOP3B-201ENST00000357179 UBTFP17480 764 aaKnown RBP21.73■■□□□ 1.07
TOP3B-201ENST00000357179 ANP32EQ9BTT0 268 aa21.72■■□□□ 1.07
TOP3B-201ENST00000357179 CLSPNQ9HAW4 1339 aa21.72■■□□□ 1.07
TOP3B-201ENST00000357179 KIF21BO75037 1637 aa21.72■■□□□ 1.07
TOP3B-201ENST00000357179 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
TOP3B-201ENST00000357179 BICRAQ9NZM4 1560 aa21.66■■□□□ 1.06
TOP3B-201ENST00000357179 SUPT16HQ9Y5B9 1047 aaKnown RBP21.61■■□□□ 1.05
TOP3B-201ENST00000357179 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
TOP3B-201ENST00000357179 BAZ1BQ9UIG0 1483 aaKnown RBP21.6■■□□□ 1.05
TOP3B-201ENST00000357179 TSHZ2Q9NRE2 1034 aa21.57■■□□□ 1.04
TOP3B-201ENST00000357179 CLIP1P30622 1438 aa21.56■■□□□ 1.04
TOP3B-201ENST00000357179 VPS8Q8N3P4 1428 aa21.55■■□□□ 1.04
TOP3B-201ENST00000357179 ATAD2BQ9ULI0 1458 aa21.48■■□□□ 1.03
TOP3B-201ENST00000357179 PABPN1Q86U42 306 aaKnown RBP eCLIP21.43■■□□□ 1.02
TOP3B-201ENST00000357179 RAPGEF2Q9Y4G8 1499 aa21.41■■□□□ 1.02
TOP3B-201ENST00000357179 TOP2BQ02880 1626 aa21.39■■□□□ 1.01
TOP3B-201ENST00000357179 HNRNPUL2Q1KMD3 747 aaKnown RBP21.39■■□□□ 1.01
TOP3B-201ENST00000357179 APLP2Q06481 763 aa21.38■■□□□ 1.01
TOP3B-201ENST00000357179 ERICH3Q5RHP9 1530 aa21.33■■□□□ 1.01
TOP3B-201ENST00000357179 BIVM-ERCC5R4GMW8 1640 aa21.33■■□□□ 1.01
TOP3B-201ENST00000357179 PRXQ9BXM0 1461 aa21.26■□□□□ 0.99
TOP3B-201ENST00000357179 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
TOP3B-201ENST00000357179 DHX57Q6P158 1386 aaKnown RBP21.17■□□□□ 0.98
TOP3B-201ENST00000357179 RRBP1Q9P2E9 1410 aaKnown RBP21.13■□□□□ 0.97
TOP3B-201ENST00000357179 HMGXB3Q12766 1538 aa21.11■□□□□ 0.97
TOP3B-201ENST00000357179 CUX2O14529 1486 aa21.11■□□□□ 0.97
TOP3B-201ENST00000357179 KIF27Q86VH2 1401 aa21.06■□□□□ 0.96
TOP3B-201ENST00000357179 NCAPD3P42695 1498 aa21.06■□□□□ 0.96
TOP3B-201ENST00000357179 CUX1P39880 1505 aa21.05■□□□□ 0.96
TOP3B-201ENST00000357179 RANGAP1P46060 587 aaPredicted RBP21.04■□□□□ 0.96
TOP3B-201ENST00000357179 RBM19Q9Y4C8 960 aaKnown RBP21.03■□□□□ 0.96
TOP3B-201ENST00000357179 KANK4Q5T7N3 995 aaPredicted RBP21.02■□□□□ 0.95
TOP3B-201ENST00000357179 BCANQ96GW7 911 aa20.98■□□□□ 0.95
TOP3B-201ENST00000357179 CCNB3Q8WWL7 1395 aa20.96■□□□□ 0.95
TOP3B-201ENST00000357179 CFTRP13569 1480 aa20.96■□□□□ 0.95
TOP3B-201ENST00000357179 ARHGAP35Q9NRY4 1499 aa20.96■□□□□ 0.95
TOP3B-201ENST00000357179 PRKCSHP14314 528 aaPredicted RBP20.95■□□□□ 0.94
TOP3B-201ENST00000357179 FKBP8Q14318 412 aa20.94■□□□□ 0.94
TOP3B-201ENST00000357179 MAP3K1Q13233 1512 aa20.93■□□□□ 0.94
TOP3B-201ENST00000357179 KCNH8Q96L42 1107 aa20.87■□□□□ 0.93
TOP3B-201ENST00000357179 PRDM2Q13029 1718 aa20.86■□□□□ 0.93
TOP3B-201ENST00000357179 MSH5O43196 834 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms