Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.72□□□□□ -0.21
APOA1P02647 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.72□□□□□ -0.21
APOA1P02647 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOA1P02647 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
APOA1P02647 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.72□□□□□ -0.21
APOA1P02647 AC073957.3-201ENST00000609998 6758 ntBASIC13.72□□□□□ -0.21
APOA1P02647 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.72□□□□□ -0.21
APOA1P02647 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
APOA1P02647 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.72□□□□□ -0.21
APOA1P02647 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOA1P02647 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOA1P02647 RPS15P9-201ENST00000494093 319 ntBASIC13.72□□□□□ -0.21
APOA1P02647 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.72□□□□□ -0.21
APOA1P02647 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
APOA1P02647 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.72□□□□□ -0.21
APOA1P02647 AC006557.2-201ENST00000592985 1240 ntBASIC13.72□□□□□ -0.21
APOA1P02647 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.72□□□□□ -0.21
APOA1P02647 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOA1P02647 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOA1P02647 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
APOA1P02647 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOA1P02647 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOA1P02647 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOA1P02647 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC13.72□□□□□ -0.21
APOA1P02647 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
APOA1P02647 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.72□□□□□ -0.21
APOA1P02647 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOA1P02647 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
APOA1P02647 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOA1P02647 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.72□□□□□ -0.21
APOA1P02647 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOA1P02647 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOA1P02647 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOA1P02647 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOA1P02647 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.72□□□□□ -0.21
APOA1P02647 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC13.72□□□□□ -0.21
APOA1P02647 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APOA1P02647 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.71□□□□□ -0.21
APOA1P02647 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 NUTM2HP-201ENST00000442076 2498 ntBASIC13.71□□□□□ -0.21
APOA1P02647 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.71□□□□□ -0.21
APOA1P02647 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.71□□□□□ -0.21
APOA1P02647 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 AL589702.1-201ENST00000641229 1509 ntBASIC13.71□□□□□ -0.21
APOA1P02647 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APOA1P02647 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.71□□□□□ -0.21
APOA1P02647 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.71□□□□□ -0.21
APOA1P02647 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.71□□□□□ -0.21
APOA1P02647 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
APOA1P02647 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
APOA1P02647 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.71□□□□□ -0.21
APOA1P02647 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.71□□□□□ -0.21
APOA1P02647 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.71□□□□□ -0.21
APOA1P02647 GPX1P2-201ENST00000429271 606 ntBASIC13.71□□□□□ -0.21
APOA1P02647 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.71□□□□□ -0.21
APOA1P02647 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.71□□□□□ -0.21
APOA1P02647 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.71□□□□□ -0.21
APOA1P02647 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.71□□□□□ -0.21
APOA1P02647 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.71□□□□□ -0.21
APOA1P02647 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 AC069148.1-201ENST00000608741 768 ntBASIC13.71□□□□□ -0.21
APOA1P02647 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
APOA1P02647 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
APOA1P02647 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.71□□□□□ -0.21
APOA1P02647 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
APOA1P02647 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOA1P02647 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOA1P02647 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.71□□□□□ -0.22
APOA1P02647 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOA1P02647 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
APOA1P02647 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOA1P02647 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOA1P02647 AC092053.3-201ENST00000641308 4975 ntBASIC13.71□□□□□ -0.22
APOA1P02647 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
APOA1P02647 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.71□□□□□ -0.22
APOA1P02647 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
APOA1P02647 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.71□□□□□ -0.22
APOA1P02647 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
APOA1P02647 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
APOA1P02647 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
APOA1P02647 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.7□□□□□ -0.22
APOA1P02647 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms