RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 NISCHQ9Y2I1 1504 aa34.97■■■■□ 3.19
GTF3C5-204ENST00000372108 CCDC180Q9P1Z9 1646 aa30.36■■■□□ 2.45
GTF3C5-204ENST00000372108 ZCCHC6Q5VYS8 1495 aaKnown RBP29.4■■■□□ 2.3
GTF3C5-204ENST00000372108 DCAF8L2P0C7V8 631 aa28.9■■■□□ 2.22
GTF3C5-204ENST00000372108 DCAF1Q9Y4B6 1507 aa28.87■■■□□ 2.21
GTF3C5-204ENST00000372108 SHROOM4Q9ULL8 1493 aa28.71■■■□□ 2.19
GTF3C5-204ENST00000372108 ABCC9O60706 1549 aa28.66■■■□□ 2.18
GTF3C5-204ENST00000372108 MYO15BQ96JP2 1530 aa28.47■■■□□ 2.15
GTF3C5-204ENST00000372108 NACADO15069 1562 aa28.26■■■□□ 2.12
GTF3C5-204ENST00000372108 SCRIBQ14160 1630 aa28.01■■■□□ 2.07
GTF3C5-204ENST00000372108 RB1CC1Q8TDY2 1594 aa27.98■■■□□ 2.07
GTF3C5-204ENST00000372108 SUPT5HO00267 1087 aaKnown RBP27.7■■■□□ 2.03
GTF3C5-204ENST00000372108 UNC13AQ9UPW8 1703 aa27.46■■□□□ 1.99
GTF3C5-204ENST00000372108 RSF1Q96T23 1441 aaPredicted RBP27.22■■□□□ 1.95
GTF3C5-204ENST00000372108 CECR2Q9BXF3 1484 aa27.21■■□□□ 1.95
GTF3C5-204ENST00000372108 BICRAQ9NZM4 1560 aa27.2■■□□□ 1.94
GTF3C5-204ENST00000372108 PABPN1Q86U42 306 aaKnown RBP eCLIP27.11■■□□□ 1.931e-8■■■□□ 15.2
GTF3C5-204ENST00000372108 MROH2BQ7Z745 1585 aa27.06■■□□□ 1.92
GTF3C5-204ENST00000372108 BAZ1AQ9NRL2 1556 aaPredicted RBP26.96■■□□□ 1.91
GTF3C5-204ENST00000372108 SMARCA4P51532 1647 aa26.84■■□□□ 1.89
GTF3C5-204ENST00000372108 WIZO95785 1651 aa26.84■■□□□ 1.89
GTF3C5-204ENST00000372108 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
GTF3C5-204ENST00000372108 TOP2AP11388 1531 aaKnown RBP26.52■■□□□ 1.84
GTF3C5-204ENST00000372108 PEG3Q9GZU2 1588 aa26.49■■□□□ 1.83
GTF3C5-204ENST00000372108 ATAD2BQ9ULI0 1458 aa26.38■■□□□ 1.81
GTF3C5-204ENST00000372108 EIF4G1Q04637 1599 aaKnown RBP26.34■■□□□ 1.81
GTF3C5-204ENST00000372108 SMARCA2P51531 1590 aa26.33■■□□□ 1.81
GTF3C5-204ENST00000372108 CCDC88BA6NC98 1476 aa26.31■■□□□ 1.8
GTF3C5-204ENST00000372108 BAZ1BQ9UIG0 1483 aaKnown RBP26.22■■□□□ 1.79
GTF3C5-204ENST00000372108 NCAPD3P42695 1498 aa26.11■■□□□ 1.77
GTF3C5-204ENST00000372108 HMGXB3Q12766 1538 aa26.06■■□□□ 1.76
GTF3C5-204ENST00000372108 TRIM41Q8WV44 630 aa26■■□□□ 1.75
GTF3C5-204ENST00000372108 CC2D2AQ9P2K1 1620 aa25.92■■□□□ 1.74
GTF3C5-204ENST00000372108 ABCC8Q09428 1581 aa25.81■■□□□ 1.72
GTF3C5-204ENST00000372108 LOC105371045A0A1W2PR82 267 aa25.63■■□□□ 1.69
GTF3C5-204ENST00000372108 WRNQ14191 1432 aaPredicted RBP eCLIP25.59■■□□□ 1.691e-6■■■■■ 58.5
GTF3C5-204ENST00000372108 CFTRP13569 1480 aa25.58■■□□□ 1.69
GTF3C5-204ENST00000372108 FAM9AQ8IZU1 332 aaPredicted RBP25.57■■□□□ 1.68
GTF3C5-204ENST00000372108 SYNJ1O43426 1573 aa25.5■■□□□ 1.67
GTF3C5-204ENST00000372108 CADPSQ9ULU8 1353 aa25.47■■□□□ 1.67
GTF3C5-204ENST00000372108 PRDM2Q13029 1718 aa25.4■■□□□ 1.66
GTF3C5-204ENST00000372108 SOGA1O94964 1423 aa25.37■■□□□ 1.65
GTF3C5-204ENST00000372108 TOP2BQ02880 1626 aa25.36■■□□□ 1.65
GTF3C5-204ENST00000372108 DNAJC5BQ9UF47 199 aa25.34■■□□□ 1.65
GTF3C5-204ENST00000372108 BIVM-ERCC5R4GMW8 1640 aa25.31■■□□□ 1.64
GTF3C5-204ENST00000372108 CUX1P39880 1505 aa25.28■■□□□ 1.64
GTF3C5-204ENST00000372108 RUSC2Q8N2Y8 1516 aa25.28■■□□□ 1.64
GTF3C5-204ENST00000372108 EEA1Q15075 1411 aa25.26■■□□□ 1.63
GTF3C5-204ENST00000372108 EHMT2Q96KQ7 1210 aa25.24■■□□□ 1.63
GTF3C5-204ENST00000372108 NESP48681 1621 aa25.23■■□□□ 1.63
GTF3C5-204ENST00000372108 FANCD2Q9BXW9 1451 aa25.19■■□□□ 1.62
GTF3C5-204ENST00000372108 CSRNP3Q8WYN3 585 aa25.18■■□□□ 1.62
GTF3C5-204ENST00000372108 LAMC3Q9Y6N6 1575 aa25.17■■□□□ 1.62
GTF3C5-204ENST00000372108 PDS5BQ9NTI5 1447 aa24.99■■□□□ 1.59
GTF3C5-204ENST00000372108 CEP164Q9UPV0 1460 aa24.99■■□□□ 1.59
GTF3C5-204ENST00000372108 FGD5Q6ZNL6 1462 aa24.97■■□□□ 1.59
GTF3C5-204ENST00000372108 DNMBPQ6XZF7 1577 aa24.97■■□□□ 1.59
GTF3C5-204ENST00000372108 GOLGA3Q08378 1498 aa24.95■■□□□ 1.58
GTF3C5-204ENST00000372108 KIF21BO75037 1637 aa24.95■■□□□ 1.58
GTF3C5-204ENST00000372108 TOPBP1Q92547 1522 aa24.93■■□□□ 1.58
GTF3C5-204ENST00000372108 TNIKQ9UKE5 1360 aa24.93■■□□□ 1.58
GTF3C5-204ENST00000372108 KIF27Q86VH2 1401 aa24.92■■□□□ 1.58
GTF3C5-204ENST00000372108 KIF21AQ7Z4S6 1674 aa24.88■■□□□ 1.57
GTF3C5-204ENST00000372108 URB2Q14146 1524 aaKnown RBP24.88■■□□□ 1.57
GTF3C5-204ENST00000372108 UBTFP17480 764 aaKnown RBP24.88■■□□□ 1.57
GTF3C5-204ENST00000372108 CUX2O14529 1486 aa24.84■■□□□ 1.57
GTF3C5-204ENST00000372108 RAPGEF2Q9Y4G8 1499 aa24.83■■□□□ 1.57
GTF3C5-204ENST00000372108 POLA1P09884 1462 aaPredicted RBP24.83■■□□□ 1.57
GTF3C5-204ENST00000372108 PRXQ9BXM0 1461 aa24.81■■□□□ 1.56
GTF3C5-204ENST00000372108 CEP162Q5TB80 1403 aa24.81■■□□□ 1.56
GTF3C5-204ENST00000372108 RAD54L2Q9Y4B4 1467 aa24.78■■□□□ 1.56
GTF3C5-204ENST00000372108 ERICH3Q5RHP9 1530 aa24.75■■□□□ 1.55
GTF3C5-204ENST00000372108 ABCA10Q8WWZ4 1543 aa24.74■■□□□ 1.55
GTF3C5-204ENST00000372108 IGF1RP08069 1367 aa24.73■■□□□ 1.55
GTF3C5-204ENST00000372108 MRC2Q9UBG0 1479 aa24.66■■□□□ 1.54
GTF3C5-204ENST00000372108 WDR97A6NE52 1622 aa24.63■■□□□ 1.53
GTF3C5-204ENST00000372108 CARMIL1Q5VZK9 1371 aa24.59■■□□□ 1.53
GTF3C5-204ENST00000372108 PCGF6Q9BYE7 350 aa24.58■■□□□ 1.53
GTF3C5-204ENST00000372108 CLIP1P30622 1438 aa24.58■■□□□ 1.52
GTF3C5-204ENST00000372108 TARBP1Q13395 1621 aaKnown RBP24.55■■□□□ 1.52
GTF3C5-204ENST00000372108 TDRD9Q8NDG6 1382 aaKnown RBP24.53■■□□□ 1.52
GTF3C5-204ENST00000372108 ERCC6Q03468 1493 aa24.53■■□□□ 1.52
GTF3C5-204ENST00000372108 WDR62O43379 1518 aa24.53■■□□□ 1.52
GTF3C5-204ENST00000372108 ABCA5Q8WWZ7 1642 aa24.52■■□□□ 1.52
GTF3C5-204ENST00000372108 TRIM26Q12899 539 aaPredicted RBP24.51■■□□□ 1.51
GTF3C5-204ENST00000372108 GAPVD1Q14C86 1478 aa24.47■■□□□ 1.51
GTF3C5-204ENST00000372108 RANGAP1P46060 587 aaPredicted RBP24.47■■□□□ 1.51
GTF3C5-204ENST00000372108 CUL7Q14999 1698 aa24.45■■□□□ 1.5
GTF3C5-204ENST00000372108 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
GTF3C5-204ENST00000372108 PPARGC1BQ86YN6 1023 aaKnown RBP24.42■■□□□ 1.5
GTF3C5-204ENST00000372108 IFT140Q96RY7 1462 aa24.38■■□□□ 1.49
GTF3C5-204ENST00000372108 VPS8Q8N3P4 1428 aa24.37■■□□□ 1.49
GTF3C5-204ENST00000372108 AQRO60306 1485 aaKnown RBP eCLIP24.35■■□□□ 1.492e-7■■■■■ 34.1
GTF3C5-204ENST00000372108 ARAP1Q96P48 1450 aa24.33■■□□□ 1.49
GTF3C5-204ENST00000372108 ZNF608Q9ULD9 1512 aaPredicted RBP24.3■■□□□ 1.48
GTF3C5-204ENST00000372108 PBRM1Q86U86 1689 aa24.3■■□□□ 1.48
GTF3C5-204ENST00000372108 ARHGAP35Q9NRY4 1499 aa24.29■■□□□ 1.48
GTF3C5-204ENST00000372108 GRIN2BQ13224 1484 aa24.25■■□□□ 1.47
GTF3C5-204ENST00000372108 CTTNBP2Q8WZ74 1663 aa24.2■■□□□ 1.46
GTF3C5-204ENST00000372108 FHAD1B1AJZ9 1412 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms