RNA–Protein interactions for RNA: ENST00000620134.4

NPRL3-212, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPRL3, Length 3,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-212ENST00000620134 NISCHQ9Y2I1 1504 aa29.71■■■□□ 2.35
NPRL3-212ENST00000620134 SHROOM4Q9ULL8 1493 aa26.38■■□□□ 1.81
NPRL3-212ENST00000620134 DCAF8L2P0C7V8 631 aa26.05■■□□□ 1.76
NPRL3-212ENST00000620134 SUPT5HO00267 1087 aaKnown RBP25.88■■□□□ 1.73
NPRL3-212ENST00000620134 ZCCHC6Q5VYS8 1495 aaKnown RBP25.01■■□□□ 1.59
NPRL3-212ENST00000620134 CCDC180Q9P1Z9 1646 aa24.78■■□□□ 1.56
NPRL3-212ENST00000620134 CHIC1Q5VXU3 224 aa24.61■■□□□ 1.53
NPRL3-212ENST00000620134 MYO15BQ96JP2 1530 aa24.39■■□□□ 1.49
NPRL3-212ENST00000620134 EHMT2Q96KQ7 1210 aa24.29■■□□□ 1.48
NPRL3-212ENST00000620134 LOC105371045A0A1W2PR82 267 aa24.29■■□□□ 1.48
NPRL3-212ENST00000620134 PCGF6Q9BYE7 350 aa24.19■■□□□ 1.46
NPRL3-212ENST00000620134 ABCC9O60706 1549 aa24.12■■□□□ 1.45
NPRL3-212ENST00000620134 FAM9AQ8IZU1 332 aaPredicted RBP24.1■■□□□ 1.45
NPRL3-212ENST00000620134 SCRIBQ14160 1630 aa24.01■■□□□ 1.43
NPRL3-212ENST00000620134 DCAF1Q9Y4B6 1507 aa23.88■■□□□ 1.41
NPRL3-212ENST00000620134 TRIM41Q8WV44 630 aa23.8■■□□□ 1.4
NPRL3-212ENST00000620134 PPARGC1BQ86YN6 1023 aaKnown RBP23.74■■□□□ 1.39
NPRL3-212ENST00000620134 RSF1Q96T23 1441 aaPredicted RBP23.69■■□□□ 1.38
NPRL3-212ENST00000620134 HRCP23327 699 aa23.68■■□□□ 1.38
NPRL3-212ENST00000620134 CECR2Q9BXF3 1484 aa23.56■■□□□ 1.36
NPRL3-212ENST00000620134 RB1CC1Q8TDY2 1594 aa23.44■■□□□ 1.34
NPRL3-212ENST00000620134 PABPN1Q86U42 306 aaKnown RBP eCLIP23.4■■□□□ 1.34
NPRL3-212ENST00000620134 TTBK1Q5TCY1 1321 aaPredicted RBP23.4■■□□□ 1.34
NPRL3-212ENST00000620134 MROH2BQ7Z745 1585 aa23.3■■□□□ 1.32
NPRL3-212ENST00000620134 TRIM26Q12899 539 aaPredicted RBP23.29■■□□□ 1.32
NPRL3-212ENST00000620134 NACADO15069 1562 aa23.19■■□□□ 1.3
NPRL3-212ENST00000620134 WIZO95785 1651 aa23.14■■□□□ 1.29
NPRL3-212ENST00000620134 RANGAP1P46060 587 aaPredicted RBP22.95■■□□□ 1.27
NPRL3-212ENST00000620134 UBTFP17480 764 aaKnown RBP22.86■■□□□ 1.25
NPRL3-212ENST00000620134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.84■■□□□ 1.25
NPRL3-212ENST00000620134 ABCC8Q09428 1581 aa22.83■■□□□ 1.24
NPRL3-212ENST00000620134 BAZ1AQ9NRL2 1556 aaPredicted RBP22.77■■□□□ 1.24
NPRL3-212ENST00000620134 CCDC88BA6NC98 1476 aa22.73■■□□□ 1.23
NPRL3-212ENST00000620134 CCER1Q8TC90 406 aaPredicted RBP22.69■■□□□ 1.22
NPRL3-212ENST00000620134 SOGA1O94964 1423 aa22.67■■□□□ 1.22
NPRL3-212ENST00000620134 SMARCA4P51532 1647 aa22.58■■□□□ 1.21
NPRL3-212ENST00000620134 RUSC2Q8N2Y8 1516 aa22.57■■□□□ 1.2
NPRL3-212ENST00000620134 CSRNP3Q8WYN3 585 aa22.57■■□□□ 1.2
NPRL3-212ENST00000620134 ZEB1P37275 1124 aaPredicted RBP22.54■■□□□ 1.2
NPRL3-212ENST00000620134 TOP2AP11388 1531 aaKnown RBP22.52■■□□□ 1.2
NPRL3-212ENST00000620134 SMARCA2P51531 1590 aa22.47■■□□□ 1.19
NPRL3-212ENST00000620134 UNC13AQ9UPW8 1703 aa22.45■■□□□ 1.19
NPRL3-212ENST00000620134 HNRNPUL2Q1KMD3 747 aaKnown RBP22.42■■□□□ 1.18
NPRL3-212ENST00000620134 CEP162Q5TB80 1403 aa22.41■■□□□ 1.18
NPRL3-212ENST00000620134 WRNQ14191 1432 aaPredicted RBP eCLIP22.34■■□□□ 1.17
NPRL3-212ENST00000620134 BICRAQ9NZM4 1560 aa22.34■■□□□ 1.17
NPRL3-212ENST00000620134 EIF4G1Q04637 1599 aaKnown RBP22.3■■□□□ 1.16
NPRL3-212ENST00000620134 APLP2Q06481 763 aa22.25■■□□□ 1.15
NPRL3-212ENST00000620134 BAZ1BQ9UIG0 1483 aaKnown RBP22.24■■□□□ 1.15
NPRL3-212ENST00000620134 ATAD2BQ9ULI0 1458 aa22.2■■□□□ 1.14
NPRL3-212ENST00000620134 TNIKQ9UKE5 1360 aa22.2■■□□□ 1.14
NPRL3-212ENST00000620134 GOLGA3Q08378 1498 aa22.1■■□□□ 1.13
NPRL3-212ENST00000620134 SYNJ1O43426 1573 aa22.08■■□□□ 1.13
NPRL3-212ENST00000620134 CLIP1P30622 1438 aa22.06■■□□□ 1.12
NPRL3-212ENST00000620134 ITGAEP38570 1179 aa22.05■■□□□ 1.12
NPRL3-212ENST00000620134 DIEXFQ68CQ4 756 aaKnown RBP22.04■■□□□ 1.12
NPRL3-212ENST00000620134 RAPGEF2Q9Y4G8 1499 aa22.02■■□□□ 1.11
NPRL3-212ENST00000620134 YTHDC1Q96MU7 727 aaKnown RBP22.01■■□□□ 1.11
NPRL3-212ENST00000620134 EEA1Q15075 1411 aa22■■□□□ 1.11
NPRL3-212ENST00000620134 ATP1B4Q9UN42 357 aaPredicted RBP21.97■■□□□ 1.11
NPRL3-212ENST00000620134 SCAF1Q9H7N4 1312 aaKnown RBP21.94■■□□□ 1.1
NPRL3-212ENST00000620134 CEP164Q9UPV0 1460 aa21.94■■□□□ 1.1
NPRL3-212ENST00000620134 P3H3Q8IVL6 736 aa21.88■■□□□ 1.09
NPRL3-212ENST00000620134 KANK4Q5T7N3 995 aaPredicted RBP21.85■■□□□ 1.09
NPRL3-212ENST00000620134 NEUROD1Q13562 356 aa21.82■■□□□ 1.08
NPRL3-212ENST00000620134 PEG3Q9GZU2 1588 aa21.8■■□□□ 1.08
NPRL3-212ENST00000620134 VPS8Q8N3P4 1428 aa21.76■■□□□ 1.07
NPRL3-212ENST00000620134 ZNF316A6NFI3 1004 aaPredicted RBP21.74■■□□□ 1.07
NPRL3-212ENST00000620134 ACIN1Q9UKV3 1341 aaKnown RBP21.65■■□□□ 1.06
NPRL3-212ENST00000620134 GTF3C3Q9Y5Q9 886 aa21.65■■□□□ 1.06
NPRL3-212ENST00000620134 KIF21BO75037 1637 aa21.64■■□□□ 1.06
NPRL3-212ENST00000620134 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
NPRL3-212ENST00000620134 CUX1P39880 1505 aa21.63■■□□□ 1.05
NPRL3-212ENST00000620134 MIER1Q8N108 512 aa21.63■■□□□ 1.05
NPRL3-212ENST00000620134 NCAPD3P42695 1498 aa21.62■■□□□ 1.05
NPRL3-212ENST00000620134 TOP2BQ02880 1626 aa21.59■■□□□ 1.05
NPRL3-212ENST00000620134 CUX2O14529 1486 aa21.59■■□□□ 1.05
NPRL3-212ENST00000620134 CENPBP07199 599 aaPredicted RBP21.59■■□□□ 1.05
NPRL3-212ENST00000620134 FAM50AQ14320 339 aaKnown RBP21.58■■□□□ 1.04
NPRL3-212ENST00000620134 ARAP1Q96P48 1450 aa21.55■■□□□ 1.04
NPRL3-212ENST00000620134 DNAJC5BQ9UF47 199 aa21.53■■□□□ 1.04
NPRL3-212ENST00000620134 PRXQ9BXM0 1461 aa21.5■■□□□ 1.03
NPRL3-212ENST00000620134 CFTRP13569 1480 aa21.49■■□□□ 1.03
NPRL3-212ENST00000620134 CADPSQ9ULU8 1353 aa21.46■■□□□ 1.03
NPRL3-212ENST00000620134 ARID3CA6NKF2 412 aa21.46■■□□□ 1.03
NPRL3-212ENST00000620134 IGF1RP08069 1367 aa21.45■■□□□ 1.02
NPRL3-212ENST00000620134 CARMIL1Q5VZK9 1371 aa21.44■■□□□ 1.02
NPRL3-212ENST00000620134 HMGXB3Q12766 1538 aa21.41■■□□□ 1.02
NPRL3-212ENST00000620134 NESP48681 1621 aa21.39■■□□□ 1.01
NPRL3-212ENST00000620134 FGD5Q6ZNL6 1462 aa21.37■■□□□ 1.01
NPRL3-212ENST00000620134 RAD54L2Q9Y4B4 1467 aa21.37■■□□□ 1.01
NPRL3-212ENST00000620134 ARHGAP35Q9NRY4 1499 aa21.37■■□□□ 1.01
NPRL3-212ENST00000620134 HIRIP3Q9BW71 556 aaPredicted RBP21.36■■□□□ 1.01
NPRL3-212ENST00000620134 BIVM-ERCC5R4GMW8 1640 aa21.35■■□□□ 1.01
NPRL3-212ENST00000620134 DHX57Q6P158 1386 aaKnown RBP21.34■■□□□ 1.01
NPRL3-212ENST00000620134 CCNB3Q8WWL7 1395 aa21.33■■□□□ 1
NPRL3-212ENST00000620134 SIN3AQ96ST3 1273 aa21.32■■□□□ 1
NPRL3-212ENST00000620134 TDRD9Q8NDG6 1382 aaKnown RBP21.29■■□□□ 1
NPRL3-212ENST00000620134 ERICH3Q5RHP9 1530 aa21.28■■□□□ 1
NPRL3-212ENST00000620134 FANCD2Q9BXW9 1451 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms