RNA–Protein interactions for RNA: ENST00000401026.7

CCDC18-203, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC18, Length 4,552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-203ENST00000401026 NISCHQ9Y2I1 1504 aa23.45■■□□□ 1.34
CCDC18-203ENST00000401026 DCAF8L2P0C7V8 631 aa22.59■■□□□ 1.21
CCDC18-203ENST00000401026 SUPT5HO00267 1087 aaKnown RBP22.27■■□□□ 1.16
CCDC18-203ENST00000401026 SHROOM4Q9ULL8 1493 aa22.06■■□□□ 1.12
CCDC18-203ENST00000401026 PCGF6Q9BYE7 350 aa21.17■□□□□ 0.98
CCDC18-203ENST00000401026 EHMT2Q96KQ7 1210 aa21.14■□□□□ 0.97
CCDC18-203ENST00000401026 FAM9AQ8IZU1 332 aaPredicted RBP20.86■□□□□ 0.93
CCDC18-203ENST00000401026 PELP1Q8IZL8 1130 aaKnown RBP20.66■□□□□ 0.9
CCDC18-203ENST00000401026 TRIM41Q8WV44 630 aa20.57■□□□□ 0.88
CCDC18-203ENST00000401026 HRCP23327 699 aa20.56■□□□□ 0.88
CCDC18-203ENST00000401026 CHIC1Q5VXU3 224 aa20.56■□□□□ 0.88
CCDC18-203ENST00000401026 TTBK1Q5TCY1 1321 aaPredicted RBP20.47■□□□□ 0.87
CCDC18-203ENST00000401026 ZEB1P37275 1124 aaPredicted RBP20.45■□□□□ 0.86
CCDC18-203ENST00000401026 LOC105371045A0A1W2PR82 267 aa20.4■□□□□ 0.86
CCDC18-203ENST00000401026 TRIM26Q12899 539 aaPredicted RBP20.32■□□□□ 0.84
CCDC18-203ENST00000401026 CCER1Q8TC90 406 aaPredicted RBP20.29■□□□□ 0.84
CCDC18-203ENST00000401026 APLP2Q06481 763 aa20.28■□□□□ 0.84
CCDC18-203ENST00000401026 PPARGC1BQ86YN6 1023 aaKnown RBP20.25■□□□□ 0.83
CCDC18-203ENST00000401026 CENPBP07199 599 aaPredicted RBP20.2■□□□□ 0.82
CCDC18-203ENST00000401026 RANGAP1P46060 587 aaPredicted RBP20.03■□□□□ 0.8
CCDC18-203ENST00000401026 UBTFP17480 764 aaKnown RBP20.03■□□□□ 0.8
CCDC18-203ENST00000401026 ERICH6Q7L0X2 663 aa19.96■□□□□ 0.79
CCDC18-203ENST00000401026 MYT1Q01538 1121 aa19.96■□□□□ 0.79
CCDC18-203ENST00000401026 YTHDC1Q96MU7 727 aaKnown RBP19.88■□□□□ 0.77
CCDC18-203ENST00000401026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.71■□□□□ 0.75
CCDC18-203ENST00000401026 ZCCHC6Q5VYS8 1495 aaKnown RBP19.59■□□□□ 0.73
CCDC18-203ENST00000401026 HNRNPUL2Q1KMD3 747 aaKnown RBP19.56■□□□□ 0.72
CCDC18-203ENST00000401026 NEFLP07196 543 aa19.56■□□□□ 0.72
CCDC18-203ENST00000401026 ATP1B4Q9UN42 357 aaPredicted RBP19.55■□□□□ 0.72
CCDC18-203ENST00000401026 DIEXFQ68CQ4 756 aaKnown RBP19.52■□□□□ 0.71
CCDC18-203ENST00000401026 MYO15BQ96JP2 1530 aa19.43■□□□□ 0.7
CCDC18-203ENST00000401026 DCAF1Q9Y4B6 1507 aa19.39■□□□□ 0.7
CCDC18-203ENST00000401026 ITGAEP38570 1179 aa19.37■□□□□ 0.69
CCDC18-203ENST00000401026 ABCC9O60706 1549 aa19.31■□□□□ 0.68
CCDC18-203ENST00000401026 GTF3C3Q9Y5Q9 886 aa19.27■□□□□ 0.68
CCDC18-203ENST00000401026 ACIN1Q9UKV3 1341 aaKnown RBP19.15■□□□□ 0.66
CCDC18-203ENST00000401026 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
CCDC18-203ENST00000401026 ZNF316A6NFI3 1004 aaPredicted RBP19.11■□□□□ 0.65
CCDC18-203ENST00000401026 CCDC180Q9P1Z9 1646 aa19.1■□□□□ 0.65
CCDC18-203ENST00000401026 CSRNP3Q8WYN3 585 aa19.08■□□□□ 0.65
CCDC18-203ENST00000401026 SCRIBQ14160 1630 aa19.05■□□□□ 0.64
CCDC18-203ENST00000401026 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
CCDC18-203ENST00000401026 NEUROD1Q13562 356 aa18.92■□□□□ 0.62
CCDC18-203ENST00000401026 RSF1Q96T23 1441 aaPredicted RBP18.91■□□□□ 0.62
CCDC18-203ENST00000401026 DAXXQ9UER7 740 aaPredicted RBP18.9■□□□□ 0.62
CCDC18-203ENST00000401026 CNGB1Q14028 1251 aaPredicted RBP18.89■□□□□ 0.61
CCDC18-203ENST00000401026 FAM50AQ14320 339 aaKnown RBP18.88■□□□□ 0.61
CCDC18-203ENST00000401026 POLR3GLQ9BT43 218 aa18.85■□□□□ 0.61
CCDC18-203ENST00000401026 BCANQ96GW7 911 aa18.81■□□□□ 0.6
CCDC18-203ENST00000401026 RTL5Q5HYW3 569 aaPredicted RBP18.76■□□□□ 0.59
CCDC18-203ENST00000401026 MIER1Q8N108 512 aa18.64■□□□□ 0.57
CCDC18-203ENST00000401026 ANP32CO43423 234 aa18.63■□□□□ 0.57
CCDC18-203ENST00000401026 P3H3Q8IVL6 736 aa18.6■□□□□ 0.57
CCDC18-203ENST00000401026 TRIM52Q96A61 297 aa18.59■□□□□ 0.57
CCDC18-203ENST00000401026 CEP162Q5TB80 1403 aa18.58■□□□□ 0.57
CCDC18-203ENST00000401026 CLIP1P30622 1438 aa18.5■□□□□ 0.55
CCDC18-203ENST00000401026 RB1CC1Q8TDY2 1594 aa18.5■□□□□ 0.55
CCDC18-203ENST00000401026 CECR2Q9BXF3 1484 aa18.49■□□□□ 0.55
CCDC18-203ENST00000401026 CLSPNQ9HAW4 1339 aa18.47■□□□□ 0.55
CCDC18-203ENST00000401026 DDX10Q13206 875 aaKnown RBP18.47■□□□□ 0.55
CCDC18-203ENST00000401026 TNIKQ9UKE5 1360 aa18.44■□□□□ 0.54
CCDC18-203ENST00000401026 EEA1Q15075 1411 aa18.43■□□□□ 0.54
CCDC18-203ENST00000401026 FKBP8Q14318 412 aa18.43■□□□□ 0.54
CCDC18-203ENST00000401026 CDK11AQ9UQ88 783 aaPredicted RBP18.42■□□□□ 0.54
CCDC18-203ENST00000401026 GOLGA3Q08378 1498 aa18.4■□□□□ 0.54
CCDC18-203ENST00000401026 ZNF326Q5BKZ1 582 aaKnown RBP18.36■□□□□ 0.53
CCDC18-203ENST00000401026 WRNQ14191 1432 aaPredicted RBP eCLIP18.34■□□□□ 0.53
CCDC18-203ENST00000401026 NACADO15069 1562 aa18.32■□□□□ 0.52
CCDC18-203ENST00000401026 ARID3CA6NKF2 412 aa18.31■□□□□ 0.52
CCDC18-203ENST00000401026 SOGA1O94964 1423 aa18.31■□□□□ 0.52
CCDC18-203ENST00000401026 TONSLQ96HA7 1378 aa18.3■□□□□ 0.52
CCDC18-203ENST00000401026 HIRIP3Q9BW71 556 aaPredicted RBP18.28■□□□□ 0.52
CCDC18-203ENST00000401026 MROH2BQ7Z745 1585 aa18.28■□□□□ 0.52
CCDC18-203ENST00000401026 HNRNPUQ00839 825 aaKnown RBP eCLIP18.26■□□□□ 0.51
CCDC18-203ENST00000401026 MYT1LQ9UL68 1186 aa18.25■□□□□ 0.51
CCDC18-203ENST00000401026 BAZ1AQ9NRL2 1556 aaPredicted RBP18.23■□□□□ 0.51
CCDC18-203ENST00000401026 CEP164Q9UPV0 1460 aa18.23■□□□□ 0.51
CCDC18-203ENST00000401026 EIF5BO60841 1220 aaKnown RBP18.2■□□□□ 0.5
CCDC18-203ENST00000401026 SLC4A1APQ9BWU0 796 aaKnown RBP18.19■□□□□ 0.5
CCDC18-203ENST00000401026 CCDC88BA6NC98 1476 aa18.18■□□□□ 0.5
CCDC18-203ENST00000401026 ABCC8Q09428 1581 aa18.15■□□□□ 0.5
CCDC18-203ENST00000401026 CHIC2Q9UKJ5 165 aa18.14■□□□□ 0.49
CCDC18-203ENST00000401026 FAM9BQ8IZU0 186 aa18.13■□□□□ 0.49
CCDC18-203ENST00000401026 NPM2Q86SE8 214 aaKnown RBP18.11■□□□□ 0.49
CCDC18-203ENST00000401026 ANP32AP39687 249 aaKnown RBP18.1■□□□□ 0.49
CCDC18-203ENST00000401026 FBLN2P98095 1184 aa18.09■□□□□ 0.49
CCDC18-203ENST00000401026 ZNF777Q9ULD5 760 aaPredicted RBP18.08■□□□□ 0.48
CCDC18-203ENST00000401026 IRX6P78412 446 aaPredicted RBP18.07■□□□□ 0.48
CCDC18-203ENST00000401026 MTUS2Q5JR59 1369 aa18.06■□□□□ 0.48
CCDC18-203ENST00000401026 BAZ1BQ9UIG0 1483 aaKnown RBP18.05■□□□□ 0.48
CCDC18-203ENST00000401026 SIN3AQ96ST3 1273 aa18.05■□□□□ 0.48
CCDC18-203ENST00000401026 SUPT16HQ9Y5B9 1047 aaKnown RBP18.05■□□□□ 0.48
CCDC18-203ENST00000401026 VPS8Q8N3P4 1428 aa18.03■□□□□ 0.48
CCDC18-203ENST00000401026 WIZO95785 1651 aa18.03■□□□□ 0.48
CCDC18-203ENST00000401026 KIF27Q86VH2 1401 aa18.02■□□□□ 0.47
CCDC18-203ENST00000401026 MRS2Q9HD23 443 aa18■□□□□ 0.47
CCDC18-203ENST00000401026 KANK4Q5T7N3 995 aaPredicted RBP17.98■□□□□ 0.47
CCDC18-203ENST00000401026 CCNB3Q8WWL7 1395 aa17.98■□□□□ 0.47
CCDC18-203ENST00000401026 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
CCDC18-203ENST00000401026 RRP7BPQ9NSQ0 103 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms