RNA–Protein interactions for RNA: ENST00000574526.1

LINC01978-202, Transcript of long intergenic non-protein coding RNA 1978, humanhuman

TSL 1 (best) BASIC

Gene LINC01978, Length 1,540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01978-202ENST00000574526 NISCHQ9Y2I1 1504 aa36.52■■■■□ 3.44
LINC01978-202ENST00000574526 CCDC180Q9P1Z9 1646 aa32.01■■■□□ 2.71
LINC01978-202ENST00000574526 ZCCHC6Q5VYS8 1495 aaKnown RBP30.66■■■□□ 2.5
LINC01978-202ENST00000574526 ABCC9O60706 1549 aa30.27■■■□□ 2.44
LINC01978-202ENST00000574526 DCAF1Q9Y4B6 1507 aa30.27■■■□□ 2.44
LINC01978-202ENST00000574526 DCAF8L2P0C7V8 631 aa30.02■■■□□ 2.4
LINC01978-202ENST00000574526 MYO15BQ96JP2 1530 aa30.01■■■□□ 2.39
LINC01978-202ENST00000574526 NACADO15069 1562 aa29.82■■■□□ 2.36
LINC01978-202ENST00000574526 RB1CC1Q8TDY2 1594 aa29.59■■■□□ 2.33
LINC01978-202ENST00000574526 SHROOM4Q9ULL8 1493 aa29.49■■■□□ 2.31
LINC01978-202ENST00000574526 SCRIBQ14160 1630 aa29.28■■■□□ 2.28
LINC01978-202ENST00000574526 UNC13AQ9UPW8 1703 aa29■■■□□ 2.23
LINC01978-202ENST00000574526 BICRAQ9NZM4 1560 aa28.7■■■□□ 2.18
LINC01978-202ENST00000574526 PABPN1Q86U42 306 aaKnown RBP eCLIP28.46■■■□□ 2.15
LINC01978-202ENST00000574526 CECR2Q9BXF3 1484 aa28.34■■■□□ 2.13
LINC01978-202ENST00000574526 SUPT5HO00267 1087 aaKnown RBP28.28■■■□□ 2.12
LINC01978-202ENST00000574526 RSF1Q96T23 1441 aaPredicted RBP28.23■■■□□ 2.11
LINC01978-202ENST00000574526 BAZ1AQ9NRL2 1556 aaPredicted RBP28.23■■■□□ 2.11
LINC01978-202ENST00000574526 MROH2BQ7Z745 1585 aa28.18■■■□□ 2.1
LINC01978-202ENST00000574526 SMARCA4P51532 1647 aa28.12■■■□□ 2.09
LINC01978-202ENST00000574526 WIZO95785 1651 aa27.94■■■□□ 2.06
LINC01978-202ENST00000574526 PEG3Q9GZU2 1588 aa27.84■■■□□ 2.05
LINC01978-202ENST00000574526 EIF4G1Q04637 1599 aaKnown RBP27.83■■■□□ 2.05
LINC01978-202ENST00000574526 SMARCA2P51531 1590 aa27.7■■■□□ 2.02
LINC01978-202ENST00000574526 TOP2AP11388 1531 aaKnown RBP27.69■■■□□ 2.02
LINC01978-202ENST00000574526 ATAD2BQ9ULI0 1458 aa27.69■■■□□ 2.02
LINC01978-202ENST00000574526 NCAPD3P42695 1498 aa27.51■■□□□ 1.99
LINC01978-202ENST00000574526 BAZ1BQ9UIG0 1483 aaKnown RBP27.51■■□□□ 1.99
LINC01978-202ENST00000574526 HMGXB3Q12766 1538 aa27.48■■□□□ 1.99
LINC01978-202ENST00000574526 CC2D2AQ9P2K1 1620 aa27.45■■□□□ 1.99
LINC01978-202ENST00000574526 CCDC88BA6NC98 1476 aa27.35■■□□□ 1.97
LINC01978-202ENST00000574526 CHIC1Q5VXU3 224 aa27.06■■□□□ 1.92
LINC01978-202ENST00000574526 DNAJC5BQ9UF47 199 aa26.84■■□□□ 1.89
LINC01978-202ENST00000574526 CFTRP13569 1480 aa26.83■■□□□ 1.89
LINC01978-202ENST00000574526 CADPSQ9ULU8 1353 aa26.75■■□□□ 1.87
LINC01978-202ENST00000574526 PRDM2Q13029 1718 aa26.75■■□□□ 1.87
LINC01978-202ENST00000574526 ABCC8Q09428 1581 aa26.69■■□□□ 1.86
LINC01978-202ENST00000574526 TRIM41Q8WV44 630 aa26.66■■□□□ 1.86
LINC01978-202ENST00000574526 LAMC3Q9Y6N6 1575 aa26.62■■□□□ 1.85
LINC01978-202ENST00000574526 WRNQ14191 1432 aaPredicted RBP eCLIP26.57■■□□□ 1.84
LINC01978-202ENST00000574526 NESP48681 1621 aa26.53■■□□□ 1.84
LINC01978-202ENST00000574526 SYNJ1O43426 1573 aa26.48■■□□□ 1.83
LINC01978-202ENST00000574526 FANCD2Q9BXW9 1451 aa26.45■■□□□ 1.82
LINC01978-202ENST00000574526 TOP2BQ02880 1626 aa26.42■■□□□ 1.82
LINC01978-202ENST00000574526 BIVM-ERCC5R4GMW8 1640 aa26.42■■□□□ 1.82
LINC01978-202ENST00000574526 PDS5BQ9NTI5 1447 aa26.38■■□□□ 1.81
LINC01978-202ENST00000574526 CUX1P39880 1505 aa26.37■■□□□ 1.81
LINC01978-202ENST00000574526 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
LINC01978-202ENST00000574526 KIF21AQ7Z4S6 1674 aa26.27■■□□□ 1.8
LINC01978-202ENST00000574526 DNMBPQ6XZF7 1577 aa26.22■■□□□ 1.79
LINC01978-202ENST00000574526 TOPBP1Q92547 1522 aa26.16■■□□□ 1.78
LINC01978-202ENST00000574526 EEA1Q15075 1411 aa26.15■■□□□ 1.78
LINC01978-202ENST00000574526 SOGA1O94964 1423 aa26.14■■□□□ 1.78
LINC01978-202ENST00000574526 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.77
LINC01978-202ENST00000574526 FGD5Q6ZNL6 1462 aa26.1■■□□□ 1.77
LINC01978-202ENST00000574526 FAM9AQ8IZU1 332 aaPredicted RBP26.09■■□□□ 1.77
LINC01978-202ENST00000574526 RUSC2Q8N2Y8 1516 aa26.06■■□□□ 1.76
LINC01978-202ENST00000574526 MRC2Q9UBG0 1479 aa26.05■■□□□ 1.76
LINC01978-202ENST00000574526 POLA1P09884 1462 aaPredicted RBP26.01■■□□□ 1.75
LINC01978-202ENST00000574526 ERCC6Q03468 1493 aa25.98■■□□□ 1.75
LINC01978-202ENST00000574526 WDR62O43379 1518 aa25.95■■□□□ 1.74
LINC01978-202ENST00000574526 LOC105371045A0A1W2PR82 267 aa25.94■■□□□ 1.74
LINC01978-202ENST00000574526 CSRNP3Q8WYN3 585 aa25.94■■□□□ 1.74
LINC01978-202ENST00000574526 KIF27Q86VH2 1401 aa25.93■■□□□ 1.74
LINC01978-202ENST00000574526 THOC2Q8NI27 1593 aaKnown RBP25.91■■□□□ 1.74
LINC01978-202ENST00000574526 ABCA10Q8WWZ4 1543 aa25.91■■□□□ 1.74
LINC01978-202ENST00000574526 RAD54L2Q9Y4B4 1467 aa25.88■■□□□ 1.73
LINC01978-202ENST00000574526 CUX2O14529 1486 aa25.87■■□□□ 1.73
LINC01978-202ENST00000574526 WDR97A6NE52 1622 aa25.87■■□□□ 1.73
LINC01978-202ENST00000574526 KIF21BO75037 1637 aa25.82■■□□□ 1.72
LINC01978-202ENST00000574526 TARBP1Q13395 1621 aaKnown RBP25.81■■□□□ 1.72
LINC01978-202ENST00000574526 GOLGA3Q08378 1498 aa25.74■■□□□ 1.71
LINC01978-202ENST00000574526 PRXQ9BXM0 1461 aa25.73■■□□□ 1.71
LINC01978-202ENST00000574526 ABCA5Q8WWZ7 1642 aa25.71■■□□□ 1.71
LINC01978-202ENST00000574526 IFT140Q96RY7 1462 aa25.71■■□□□ 1.71
LINC01978-202ENST00000574526 IGF1RP08069 1367 aa25.7■■□□□ 1.7
LINC01978-202ENST00000574526 ERICH3Q5RHP9 1530 aa25.69■■□□□ 1.7
LINC01978-202ENST00000574526 EHMT2Q96KQ7 1210 aa25.65■■□□□ 1.7
LINC01978-202ENST00000574526 RAPGEF2Q9Y4G8 1499 aa25.64■■□□□ 1.7
LINC01978-202ENST00000574526 GAPVD1Q14C86 1478 aa25.63■■□□□ 1.69
LINC01978-202ENST00000574526 TDRD9Q8NDG6 1382 aaKnown RBP25.62■■□□□ 1.69
LINC01978-202ENST00000574526 TNIKQ9UKE5 1360 aa25.62■■□□□ 1.69
LINC01978-202ENST00000574526 CUL7Q14999 1698 aa25.59■■□□□ 1.69
LINC01978-202ENST00000574526 CARMIL1Q5VZK9 1371 aa25.57■■□□□ 1.68
LINC01978-202ENST00000574526 UBTFP17480 764 aaKnown RBP25.54■■□□□ 1.68
LINC01978-202ENST00000574526 PBRM1Q86U86 1689 aa25.54■■□□□ 1.68
LINC01978-202ENST00000574526 ZNF608Q9ULD9 1512 aaPredicted RBP25.52■■□□□ 1.68
LINC01978-202ENST00000574526 AQRO60306 1485 aaKnown RBP eCLIP25.51■■□□□ 1.67
LINC01978-202ENST00000574526 EIF4G3O43432 1585 aaKnown RBP25.48■■□□□ 1.67
LINC01978-202ENST00000574526 GRIN2BQ13224 1484 aa25.48■■□□□ 1.67
LINC01978-202ENST00000574526 CEP162Q5TB80 1403 aa25.43■■□□□ 1.66
LINC01978-202ENST00000574526 ADAMTS12P58397 1594 aa25.38■■□□□ 1.65
LINC01978-202ENST00000574526 FHAD1B1AJZ9 1412 aa25.37■■□□□ 1.65
LINC01978-202ENST00000574526 SNAPC4Q5SXM2 1469 aa25.3■■□□□ 1.64
LINC01978-202ENST00000574526 MAGI1Q96QZ7 1491 aaPredicted RBP25.29■■□□□ 1.64
LINC01978-202ENST00000574526 CLIP1P30622 1438 aa25.28■■□□□ 1.64
LINC01978-202ENST00000574526 CTTNBP2Q8WZ74 1663 aa25.27■■□□□ 1.64
LINC01978-202ENST00000574526 SYNJ2O15056 1496 aa25.19■■□□□ 1.62
LINC01978-202ENST00000574526 GRIN2AQ12879 1464 aa25.16■■□□□ 1.62
LINC01978-202ENST00000574526 ARHGAP35Q9NRY4 1499 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms