RNA–Protein interactions for RNA: ENST00000380725.1

CDKN1C-201, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDKN1C, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-201ENST00000380725 NISCHQ9Y2I1 1504 aa43.64■■■■■ 4.58
CDKN1C-201ENST00000380725 CCDC180Q9P1Z9 1646 aa38.9■■■■□ 3.82
CDKN1C-201ENST00000380725 ABCC9O60706 1549 aa38.44■■■■□ 3.74
CDKN1C-201ENST00000380725 RB1CC1Q8TDY2 1594 aa36.81■■■■□ 3.48
CDKN1C-201ENST00000380725 DCAF8L2P0C7V8 631 aa36.77■■■■□ 3.48
CDKN1C-201ENST00000380725 NACADO15069 1562 aa36.68■■■■□ 3.46
CDKN1C-201ENST00000380725 MYO15BQ96JP2 1530 aa36.32■■■■□ 3.4
CDKN1C-201ENST00000380725 ZCCHC6Q5VYS8 1495 aaKnown RBP36.24■■■■□ 3.39
CDKN1C-201ENST00000380725 DCAF1Q9Y4B6 1507 aa36.05■■■■□ 3.36
CDKN1C-201ENST00000380725 UNC13AQ9UPW8 1703 aa36■■■■□ 3.35
CDKN1C-201ENST00000380725 PABPN1Q86U42 306 aaKnown RBP eCLIP35.93■■■■□ 3.34
CDKN1C-201ENST00000380725 BICRAQ9NZM4 1560 aa35.7■■■■□ 3.31
CDKN1C-201ENST00000380725 DNAJC5BQ9UF47 199 aa35.64■■■■□ 3.3
CDKN1C-201ENST00000380725 SCRIBQ14160 1630 aa35.5■■■■□ 3.27
CDKN1C-201ENST00000380725 SHROOM4Q9ULL8 1493 aa35.22■■■■□ 3.23
CDKN1C-201ENST00000380725 EIF4G1Q04637 1599 aaKnown RBP34.78■■■■□ 3.16
CDKN1C-201ENST00000380725 CC2D2AQ9P2K1 1620 aa34.74■■■■□ 3.15
CDKN1C-201ENST00000380725 CECR2Q9BXF3 1484 aa34.57■■■■□ 3.12
CDKN1C-201ENST00000380725 SMARCA4P51532 1647 aa33.92■■■■□ 3.02
CDKN1C-201ENST00000380725 NCAPD3P42695 1498 aa33.87■■■■□ 3.01
CDKN1C-201ENST00000380725 ATAD2BQ9ULI0 1458 aa33.83■■■■□ 3.01
CDKN1C-201ENST00000380725 BAZ1AQ9NRL2 1556 aaPredicted RBP33.83■■■■□ 3.01
CDKN1C-201ENST00000380725 SMARCA2P51531 1590 aa33.77■■■■□ 3
CDKN1C-201ENST00000380725 MROH2BQ7Z745 1585 aa33.64■■■□□ 2.98
CDKN1C-201ENST00000380725 HMGXB3Q12766 1538 aa33.62■■■□□ 2.97
CDKN1C-201ENST00000380725 PEG3Q9GZU2 1588 aa33.56■■■□□ 2.96
CDKN1C-201ENST00000380725 BAZ1BQ9UIG0 1483 aaKnown RBP33.54■■■□□ 2.96
CDKN1C-201ENST00000380725 WIZO95785 1651 aa33.28■■■□□ 2.92
CDKN1C-201ENST00000380725 NESP48681 1621 aa33.17■■■□□ 2.9
CDKN1C-201ENST00000380725 ERCC6Q03468 1493 aa33.16■■■□□ 2.9
CDKN1C-201ENST00000380725 RSF1Q96T23 1441 aaPredicted RBP33.14■■■□□ 2.9
CDKN1C-201ENST00000380725 LAMC3Q9Y6N6 1575 aa33■■■□□ 2.87
CDKN1C-201ENST00000380725 AEBP2Q6ZN18 517 aaPredicted RBP32.93■■■□□ 2.86
CDKN1C-201ENST00000380725 CUX2O14529 1486 aa32.88■■■□□ 2.85
CDKN1C-201ENST00000380725 CADPSQ9ULU8 1353 aa32.88■■■□□ 2.85
CDKN1C-201ENST00000380725 TOP2AP11388 1531 aaKnown RBP32.85■■■□□ 2.85
CDKN1C-201ENST00000380725 PDS5BQ9NTI5 1447 aa32.83■■■□□ 2.85
CDKN1C-201ENST00000380725 KIF21AQ7Z4S6 1674 aa32.76■■■□□ 2.84
CDKN1C-201ENST00000380725 THOC2Q8NI27 1593 aaKnown RBP32.67■■■□□ 2.82
CDKN1C-201ENST00000380725 CFTRP13569 1480 aa32.59■■■□□ 2.81
CDKN1C-201ENST00000380725 CCDC88BA6NC98 1476 aa32.53■■■□□ 2.8
CDKN1C-201ENST00000380725 FANCD2Q9BXW9 1451 aa32.48■■■□□ 2.79
CDKN1C-201ENST00000380725 MRC2Q9UBG0 1479 aa32.48■■■□□ 2.79
CDKN1C-201ENST00000380725 CEP164Q9UPV0 1460 aa32.46■■■□□ 2.79
CDKN1C-201ENST00000380725 WDR62O43379 1518 aa32.36■■■□□ 2.77
CDKN1C-201ENST00000380725 DNAJC5Q9H3Z4 198 aa32.35■■■□□ 2.77
CDKN1C-201ENST00000380725 PRDM2Q13029 1718 aa32.31■■■□□ 2.76
CDKN1C-201ENST00000380725 SUPT5HO00267 1087 aaKnown RBP32.18■■■□□ 2.74
CDKN1C-201ENST00000380725 URB2Q14146 1524 aaKnown RBP32.17■■■□□ 2.74
CDKN1C-201ENST00000380725 TOPBP1Q92547 1522 aa31.93■■■□□ 2.7
CDKN1C-201ENST00000380725 ABCC8Q09428 1581 aa31.92■■■□□ 2.7
CDKN1C-201ENST00000380725 DNMBPQ6XZF7 1577 aa31.85■■■□□ 2.69
CDKN1C-201ENST00000380725 IFT140Q96RY7 1462 aa31.8■■■□□ 2.68
CDKN1C-201ENST00000380725 ZNF608Q9ULD9 1512 aaPredicted RBP31.7■■■□□ 2.67
CDKN1C-201ENST00000380725 POLA1P09884 1462 aaPredicted RBP31.63■■■□□ 2.65
CDKN1C-201ENST00000380725 TARBP1Q13395 1621 aaKnown RBP31.6■■■□□ 2.65
CDKN1C-201ENST00000380725 OSCARQ8IYS5 282 aa31.57■■■□□ 2.64
CDKN1C-201ENST00000380725 CUX1P39880 1505 aa31.56■■■□□ 2.64
CDKN1C-201ENST00000380725 CHIC1Q5VXU3 224 aa31.56■■■□□ 2.64
CDKN1C-201ENST00000380725 SOGA1O94964 1423 aa31.55■■■□□ 2.64
CDKN1C-201ENST00000380725 RAD54L2Q9Y4B4 1467 aa31.53■■■□□ 2.64
CDKN1C-201ENST00000380725 EIF4G3O43432 1585 aaKnown RBP31.52■■■□□ 2.64
CDKN1C-201ENST00000380725 AQRO60306 1485 aaKnown RBP eCLIP31.52■■■□□ 2.641e-6■■■□□ 16.1
CDKN1C-201ENST00000380725 FGD5Q6ZNL6 1462 aa31.51■■■□□ 2.63
CDKN1C-201ENST00000380725 TDRD9Q8NDG6 1382 aaKnown RBP31.43■■■□□ 2.62
CDKN1C-201ENST00000380725 WDR97A6NE52 1622 aa31.28■■■□□ 2.6
CDKN1C-201ENST00000380725 FBLN2P98095 1184 aa31.27■■■□□ 2.6
CDKN1C-201ENST00000380725 WRNQ14191 1432 aaPredicted RBP eCLIP31.26■■■□□ 2.6
CDKN1C-201ENST00000380725 CHD1O14646 1710 aa31.24■■■□□ 2.59
CDKN1C-201ENST00000380725 TOP2BQ02880 1626 aa31.2■■■□□ 2.59
CDKN1C-201ENST00000380725 BIVM-ERCC5R4GMW8 1640 aa31.2■■■□□ 2.58
CDKN1C-201ENST00000380725 ABCA10Q8WWZ4 1543 aa31.19■■■□□ 2.58
CDKN1C-201ENST00000380725 SYNJ1O43426 1573 aa31.17■■■□□ 2.58
CDKN1C-201ENST00000380725 GRIN2BQ13224 1484 aa31.17■■■□□ 2.58
CDKN1C-201ENST00000380725 TRIM41Q8WV44 630 aa31.17■■■□□ 2.58
CDKN1C-201ENST00000380725 SNAPC4Q5SXM2 1469 aa31.16■■■□□ 2.58
CDKN1C-201ENST00000380725 GAPVD1Q14C86 1478 aa31.14■■■□□ 2.58
CDKN1C-201ENST00000380725 CHMP7Q8WUX9 453 aaPredicted RBP31.11■■■□□ 2.57
CDKN1C-201ENST00000380725 MAGI1Q96QZ7 1491 aaPredicted RBP31.11■■■□□ 2.57
CDKN1C-201ENST00000380725 PBRM1Q86U86 1689 aa31.08■■■□□ 2.57
CDKN1C-201ENST00000380725 ABCA5Q8WWZ7 1642 aa31.06■■■□□ 2.56
CDKN1C-201ENST00000380725 RIMBP3CA6NJZ7 1639 aa31.02■■■□□ 2.56
CDKN1C-201ENST00000380725 RIMBP3BA6NNM3 1639 aa31.02■■■□□ 2.56
CDKN1C-201ENST00000380725 RIMBP3Q9UFD9 1639 aa31.02■■■□□ 2.56
CDKN1C-201ENST00000380725 SYNJ2O15056 1496 aa31.01■■■□□ 2.55
CDKN1C-201ENST00000380725 ARHGEF11O15085 1522 aa30.97■■■□□ 2.55
CDKN1C-201ENST00000380725 CLASP1Q7Z460 1538 aa30.83■■■□□ 2.53
CDKN1C-201ENST00000380725 CYB5RLQ6IPT4 315 aa30.82■■■□□ 2.52
CDKN1C-201ENST00000380725 ERICH3Q5RHP9 1530 aa30.79■■■□□ 2.52
CDKN1C-201ENST00000380725 ADAMTS12P58397 1594 aa30.78■■■□□ 2.52
CDKN1C-201ENST00000380725 FHAD1B1AJZ9 1412 aa30.77■■■□□ 2.52
CDKN1C-201ENST00000380725 GRIN2AQ12879 1464 aa30.76■■■□□ 2.52
CDKN1C-201ENST00000380725 ARAP1Q96P48 1450 aa30.69■■■□□ 2.5
CDKN1C-201ENST00000380725 KIF27Q86VH2 1401 aa30.64■■■□□ 2.5
CDKN1C-201ENST00000380725 NUP160Q12769 1436 aa30.63■■■□□ 2.49
CDKN1C-201ENST00000380725 CEP170Q5SW79 1584 aa30.62■■■□□ 2.49
CDKN1C-201ENST00000380725 IGF1RP08069 1367 aa30.59■■■□□ 2.49
CDKN1C-201ENST00000380725 CUL7Q14999 1698 aa30.45■■■□□ 2.46
CDKN1C-201ENST00000380725 ERCC6L2Q5T890 1561 aa30.43■■■□□ 2.46
CDKN1C-201ENST00000380725 SHROOM2Q13796 1616 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms