RNA–Protein interactions for RNA: ENST00000231134.7

PCDHB5-201, Transcript of protocadherin beta 5, humanhuman

APPRIS P1 BASIC

Gene PCDHB5, Length 3,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-201ENST00000231134 NISCHQ9Y2I1 1504 aa24.08■■□□□ 1.45
PCDHB5-201ENST00000231134 HRCP23327 699 aa23.15■■□□□ 1.3
PCDHB5-201ENST00000231134 PPARGC1BQ86YN6 1023 aaKnown RBP23.01■■□□□ 1.27
PCDHB5-201ENST00000231134 PCGF6Q9BYE7 350 aa22.85■■□□□ 1.25
PCDHB5-201ENST00000231134 PELP1Q8IZL8 1130 aaKnown RBP22.84■■□□□ 1.25
PCDHB5-201ENST00000231134 SUPT5HO00267 1087 aaKnown RBP22.71■■□□□ 1.23
PCDHB5-201ENST00000231134 SHROOM4Q9ULL8 1493 aa22.69■■□□□ 1.22
PCDHB5-201ENST00000231134 SCAF1Q9H7N4 1312 aaKnown RBP22.22■■□□□ 1.15
PCDHB5-201ENST00000231134 MYT1Q01538 1121 aa22■■□□□ 1.11
PCDHB5-201ENST00000231134 MYO15BQ96JP2 1530 aa21.96■■□□□ 1.11
PCDHB5-201ENST00000231134 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
PCDHB5-201ENST00000231134 LOC105371045A0A1W2PR82 267 aa21.75■■□□□ 1.07
PCDHB5-201ENST00000231134 TRIM26Q12899 539 aaPredicted RBP21.68■■□□□ 1.06
PCDHB5-201ENST00000231134 DCAF8L2P0C7V8 631 aa21.6■■□□□ 1.05
PCDHB5-201ENST00000231134 ZEB1P37275 1124 aaPredicted RBP21.56■■□□□ 1.04
PCDHB5-201ENST00000231134 GTF3C3Q9Y5Q9 886 aa21.56■■□□□ 1.04
PCDHB5-201ENST00000231134 EHMT2Q96KQ7 1210 aa21.55■■□□□ 1.04
PCDHB5-201ENST00000231134 NEUROD1Q13562 356 aa21.55■■□□□ 1.04
PCDHB5-201ENST00000231134 ACIN1Q9UKV3 1341 aaKnown RBP21.53■■□□□ 1.04
PCDHB5-201ENST00000231134 DCAF1Q9Y4B6 1507 aa21.36■■□□□ 1.01
PCDHB5-201ENST00000231134 CENPBP07199 599 aaPredicted RBP21.34■■□□□ 1.01
PCDHB5-201ENST00000231134 FAM9AQ8IZU1 332 aaPredicted RBP21.2■□□□□ 0.98
PCDHB5-201ENST00000231134 YTHDC1Q96MU7 727 aaKnown RBP21.17■□□□□ 0.98
PCDHB5-201ENST00000231134 DIEXFQ68CQ4 756 aaKnown RBP21.08■□□□□ 0.96
PCDHB5-201ENST00000231134 CCDC180Q9P1Z9 1646 aa21.07■□□□□ 0.96
PCDHB5-201ENST00000231134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.04■□□□□ 0.96
PCDHB5-201ENST00000231134 CCER1Q8TC90 406 aaPredicted RBP21.03■□□□□ 0.96
PCDHB5-201ENST00000231134 TTBK1Q5TCY1 1321 aaPredicted RBP20.99■□□□□ 0.95
PCDHB5-201ENST00000231134 BCL11AQ9H165 835 aa20.84■□□□□ 0.93
PCDHB5-201ENST00000231134 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
PCDHB5-201ENST00000231134 ANP32EQ9BTT0 268 aa20.51■□□□□ 0.87
PCDHB5-201ENST00000231134 MIER1Q8N108 512 aa20.49■□□□□ 0.87
PCDHB5-201ENST00000231134 ZNF316A6NFI3 1004 aaPredicted RBP20.46■□□□□ 0.87
PCDHB5-201ENST00000231134 CSRNP3Q8WYN3 585 aa20.42■□□□□ 0.86
PCDHB5-201ENST00000231134 ZCCHC6Q5VYS8 1495 aaKnown RBP20.4■□□□□ 0.86
PCDHB5-201ENST00000231134 TSHZ2Q9NRE2 1034 aa20.27■□□□□ 0.84
PCDHB5-201ENST00000231134 SUPT16HQ9Y5B9 1047 aaKnown RBP20.26■□□□□ 0.83
PCDHB5-201ENST00000231134 BCANQ96GW7 911 aa20.24■□□□□ 0.83
PCDHB5-201ENST00000231134 PRKCSHP14314 528 aaPredicted RBP20.2■□□□□ 0.82
PCDHB5-201ENST00000231134 HNRNPUL2Q1KMD3 747 aaKnown RBP20.05■□□□□ 0.8
PCDHB5-201ENST00000231134 ERICH6Q7L0X2 663 aa19.89■□□□□ 0.78
PCDHB5-201ENST00000231134 RANGAP1P46060 587 aaPredicted RBP19.89■□□□□ 0.77
PCDHB5-201ENST00000231134 FKBP8Q14318 412 aa19.86■□□□□ 0.77
PCDHB5-201ENST00000231134 CLSPNQ9HAW4 1339 aa19.86■□□□□ 0.77
PCDHB5-201ENST00000231134 ITGAEP38570 1179 aa19.83■□□□□ 0.77
PCDHB5-201ENST00000231134 RBM19Q9Y4C8 960 aaKnown RBP19.82■□□□□ 0.76
PCDHB5-201ENST00000231134 UBTFP17480 764 aaKnown RBP19.8■□□□□ 0.76
PCDHB5-201ENST00000231134 NEFLP07196 543 aa19.73■□□□□ 0.75
PCDHB5-201ENST00000231134 KCNH8Q96L42 1107 aa19.69■□□□□ 0.74
PCDHB5-201ENST00000231134 RSF1Q96T23 1441 aaPredicted RBP19.67■□□□□ 0.74
PCDHB5-201ENST00000231134 RB1CC1Q8TDY2 1594 aa19.65■□□□□ 0.74
PCDHB5-201ENST00000231134 ANO8Q9HCE9 1232 aaPredicted RBP19.62■□□□□ 0.73
PCDHB5-201ENST00000231134 MSH5O43196 834 aa19.61■□□□□ 0.73
PCDHB5-201ENST00000231134 DEKP35659 375 aaKnown RBP19.53■□□□□ 0.72
PCDHB5-201ENST00000231134 TRIM52Q96A61 297 aa19.5■□□□□ 0.71
PCDHB5-201ENST00000231134 APLP2Q06481 763 aa19.49■□□□□ 0.71
PCDHB5-201ENST00000231134 CEP162Q5TB80 1403 aa19.48■□□□□ 0.71
PCDHB5-201ENST00000231134 NBR1Q14596 966 aa19.47■□□□□ 0.71
PCDHB5-201ENST00000231134 CCDC136Q96JN2 1154 aa19.47■□□□□ 0.71
PCDHB5-201ENST00000231134 IRX6P78412 446 aaPredicted RBP19.44■□□□□ 0.7
PCDHB5-201ENST00000231134 SCRIBQ14160 1630 aa19.42■□□□□ 0.7
PCDHB5-201ENST00000231134 CDK11AQ9UQ88 783 aaPredicted RBP19.39■□□□□ 0.69
PCDHB5-201ENST00000231134 ABCC9O60706 1549 aa19.38■□□□□ 0.69
PCDHB5-201ENST00000231134 RTN4Q9NQC3 1192 aaKnown RBP19.38■□□□□ 0.69
PCDHB5-201ENST00000231134 SALL2Q9Y467 1007 aaPredicted RBP19.37■□□□□ 0.69
PCDHB5-201ENST00000231134 DDX10Q13206 875 aaKnown RBP19.36■□□□□ 0.69
PCDHB5-201ENST00000231134 WRNQ14191 1432 aaPredicted RBP eCLIP19.32■□□□□ 0.68
PCDHB5-201ENST00000231134 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.31■□□□□ 0.68
PCDHB5-201ENST00000231134 HIRIP3Q9BW71 556 aaPredicted RBP19.28■□□□□ 0.68
PCDHB5-201ENST00000231134 SOGA1O94964 1423 aa19.25■□□□□ 0.67
PCDHB5-201ENST00000231134 CECR2Q9BXF3 1484 aa19.23■□□□□ 0.67
PCDHB5-201ENST00000231134 FANCIQ9NVI1 1328 aa19.22■□□□□ 0.67
PCDHB5-201ENST00000231134 MYT1LQ9UL68 1186 aa19.22■□□□□ 0.67
PCDHB5-201ENST00000231134 CCDC88BA6NC98 1476 aa19.18■□□□□ 0.66
PCDHB5-201ENST00000231134 ABCC8Q09428 1581 aa19.18■□□□□ 0.66
PCDHB5-201ENST00000231134 TNIKQ9UKE5 1360 aa19.17■□□□□ 0.66
PCDHB5-201ENST00000231134 RTL5Q5HYW3 569 aaPredicted RBP19.16■□□□□ 0.66
PCDHB5-201ENST00000231134 IL27Q8NEV9 243 aa19.13■□□□□ 0.65
PCDHB5-201ENST00000231134 RUSC2Q8N2Y8 1516 aa19.11■□□□□ 0.65
PCDHB5-201ENST00000231134 EIF5BO60841 1220 aaKnown RBP19.1■□□□□ 0.65
PCDHB5-201ENST00000231134 DHX57Q6P158 1386 aaKnown RBP19.1■□□□□ 0.65
PCDHB5-201ENST00000231134 ANP32CO43423 234 aa19.09■□□□□ 0.65
PCDHB5-201ENST00000231134 NOP58Q9Y2X3 529 aaKnown RBP19.08■□□□□ 0.64
PCDHB5-201ENST00000231134 HNRNPUQ00839 825 aaKnown RBP eCLIP19.07■□□□□ 0.64
PCDHB5-201ENST00000231134 PAK3O75914 559 aaPredicted RBP19.05■□□□□ 0.64
PCDHB5-201ENST00000231134 MROH2BQ7Z745 1585 aa19.05■□□□□ 0.64
PCDHB5-201ENST00000231134 B4GALNT3Q6L9W6 998 aa19.02■□□□□ 0.64
PCDHB5-201ENST00000231134 WIZO95785 1651 aa18.97■□□□□ 0.63
PCDHB5-201ENST00000231134 CLIP1P30622 1438 aa18.95■□□□□ 0.62
PCDHB5-201ENST00000231134 ERICH6BQ5W0A0 696 aa18.95■□□□□ 0.62
PCDHB5-201ENST00000231134 CNGB1Q14028 1251 aaPredicted RBP18.95■□□□□ 0.62
PCDHB5-201ENST00000231134 SIN3AQ96ST3 1273 aa18.91■□□□□ 0.62
PCDHB5-201ENST00000231134 ANP32AP39687 249 aaKnown RBP18.88■□□□□ 0.61
PCDHB5-201ENST00000231134 ZBTB47Q9UFB7 747 aaPredicted RBP18.88■□□□□ 0.61
PCDHB5-201ENST00000231134 GOLGA3Q08378 1498 aa18.88■□□□□ 0.61
PCDHB5-201ENST00000231134 KANK4Q5T7N3 995 aaPredicted RBP18.87■□□□□ 0.61
PCDHB5-201ENST00000231134 NPM2Q86SE8 214 aaKnown RBP18.87■□□□□ 0.61
PCDHB5-201ENST00000231134 PPP4R2Q9NY27 417 aa18.87■□□□□ 0.61
PCDHB5-201ENST00000231134 SENP3-EIF4A1A0A087X0R7 540 aa18.85■□□□□ 0.61
PCDHB5-201ENST00000231134 UBE2Q2Q8WVN8 375 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms