RNA–Protein interactions for RNA: ENST00000536780.6

MIR9-3HG-201, Transcript of MIR9-3 host gene, humanhuman

TSL 3 BASIC

Gene MIR9-3HG, Length 4,778 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR9-3HG-201ENST00000536780 NISCHQ9Y2I1 1504 aa25.57■■□□□ 1.68
MIR9-3HG-201ENST00000536780 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.53
MIR9-3HG-201ENST00000536780 SUPT5HO00267 1087 aaKnown RBP23.31■■□□□ 1.32
MIR9-3HG-201ENST00000536780 SHROOM4Q9ULL8 1493 aa23.23■■□□□ 1.31
MIR9-3HG-201ENST00000536780 EHMT2Q96KQ7 1210 aa21.93■■□□□ 1.1
MIR9-3HG-201ENST00000536780 TRIM41Q8WV44 630 aa21.82■■□□□ 1.08
MIR9-3HG-201ENST00000536780 APLP2Q06481 763 aa21.81■■□□□ 1.08
MIR9-3HG-201ENST00000536780 FAM9AQ8IZU1 332 aaPredicted RBP21.8■■□□□ 1.08
MIR9-3HG-201ENST00000536780 ABCC9O60706 1549 aa21.65■■□□□ 1.06
MIR9-3HG-201ENST00000536780 CCDC180Q9P1Z9 1646 aa21.39■■□□□ 1.02
MIR9-3HG-201ENST00000536780 UBTFP17480 764 aaKnown RBP21.35■■□□□ 1.01
MIR9-3HG-201ENST00000536780 PCGF6Q9BYE7 350 aa21.28■■□□□ 1
MIR9-3HG-201ENST00000536780 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
MIR9-3HG-201ENST00000536780 CHIC1Q5VXU3 224 aa21.22■□□□□ 0.99
MIR9-3HG-201ENST00000536780 RANGAP1P46060 587 aaPredicted RBP21.2■□□□□ 0.98
MIR9-3HG-201ENST00000536780 TTBK1Q5TCY1 1321 aaPredicted RBP21.16■□□□□ 0.98
MIR9-3HG-201ENST00000536780 PABPN1Q86U42 306 aaKnown RBP eCLIP21.16■□□□□ 0.98
MIR9-3HG-201ENST00000536780 ZEB1P37275 1124 aaPredicted RBP21.08■□□□□ 0.97
MIR9-3HG-201ENST00000536780 ATP1B4Q9UN42 357 aaPredicted RBP21.04■□□□□ 0.96
MIR9-3HG-201ENST00000536780 CCER1Q8TC90 406 aaPredicted RBP20.9■□□□□ 0.94
MIR9-3HG-201ENST00000536780 TRIM26Q12899 539 aaPredicted RBP20.82■□□□□ 0.92
MIR9-3HG-201ENST00000536780 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
MIR9-3HG-201ENST00000536780 LOC105371045A0A1W2PR82 267 aa20.81■□□□□ 0.92
MIR9-3HG-201ENST00000536780 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
MIR9-3HG-201ENST00000536780 PELP1Q8IZL8 1130 aaKnown RBP20.66■□□□□ 0.9
MIR9-3HG-201ENST00000536780 PPARGC1BQ86YN6 1023 aaKnown RBP20.64■□□□□ 0.89
MIR9-3HG-201ENST00000536780 NACADO15069 1562 aa20.62■□□□□ 0.89
MIR9-3HG-201ENST00000536780 DCAF1Q9Y4B6 1507 aa20.56■□□□□ 0.88
MIR9-3HG-201ENST00000536780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.48■□□□□ 0.87
MIR9-3HG-201ENST00000536780 HNRNPUL2Q1KMD3 747 aaKnown RBP20.48■□□□□ 0.87
MIR9-3HG-201ENST00000536780 CENPBP07199 599 aaPredicted RBP20.42■□□□□ 0.86
MIR9-3HG-201ENST00000536780 CSRNP3Q8WYN3 585 aa20.37■□□□□ 0.85
MIR9-3HG-201ENST00000536780 HRCP23327 699 aa20.35■□□□□ 0.85
MIR9-3HG-201ENST00000536780 ITGAEP38570 1179 aa20.35■□□□□ 0.85
MIR9-3HG-201ENST00000536780 RSF1Q96T23 1441 aaPredicted RBP20.27■□□□□ 0.84
MIR9-3HG-201ENST00000536780 MYT1LQ9UL68 1186 aa20.16■□□□□ 0.82
MIR9-3HG-201ENST00000536780 MYO15BQ96JP2 1530 aa20.09■□□□□ 0.81
MIR9-3HG-201ENST00000536780 FAM50AQ14320 339 aaKnown RBP20.08■□□□□ 0.81
MIR9-3HG-201ENST00000536780 BAZ1AQ9NRL2 1556 aaPredicted RBP20.08■□□□□ 0.8
MIR9-3HG-201ENST00000536780 FBLN2P98095 1184 aa20.05■□□□□ 0.8
MIR9-3HG-201ENST00000536780 BAZ1BQ9UIG0 1483 aaKnown RBP20.01■□□□□ 0.79
MIR9-3HG-201ENST00000536780 EEA1Q15075 1411 aa19.93■□□□□ 0.78
MIR9-3HG-201ENST00000536780 NEFLP07196 543 aa19.92■□□□□ 0.78
MIR9-3HG-201ENST00000536780 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
MIR9-3HG-201ENST00000536780 P3H3Q8IVL6 736 aa19.88■□□□□ 0.77
MIR9-3HG-201ENST00000536780 YTHDC1Q96MU7 727 aaKnown RBP19.88■□□□□ 0.77
MIR9-3HG-201ENST00000536780 CDK11AQ9UQ88 783 aaPredicted RBP19.86■□□□□ 0.77
MIR9-3HG-201ENST00000536780 TRIM52Q96A61 297 aa19.86■□□□□ 0.77
MIR9-3HG-201ENST00000536780 WRNQ14191 1432 aaPredicted RBP eCLIP19.84■□□□□ 0.77
MIR9-3HG-201ENST00000536780 POLR3GLQ9BT43 218 aa19.76■□□□□ 0.75
MIR9-3HG-201ENST00000536780 MROH2BQ7Z745 1585 aa19.7■□□□□ 0.74
MIR9-3HG-201ENST00000536780 GOLGA3Q08378 1498 aa19.7■□□□□ 0.74
MIR9-3HG-201ENST00000536780 DIEXFQ68CQ4 756 aaKnown RBP19.68■□□□□ 0.74
MIR9-3HG-201ENST00000536780 CLIP1P30622 1438 aa19.68■□□□□ 0.74
MIR9-3HG-201ENST00000536780 NEUROD1Q13562 356 aa19.67■□□□□ 0.74
MIR9-3HG-201ENST00000536780 KIF27Q86VH2 1401 aa19.66■□□□□ 0.74
MIR9-3HG-201ENST00000536780 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
MIR9-3HG-201ENST00000536780 ARID3CA6NKF2 412 aa19.63■□□□□ 0.73
MIR9-3HG-201ENST00000536780 CHMP7Q8WUX9 453 aaPredicted RBP19.59■□□□□ 0.73
MIR9-3HG-201ENST00000536780 CEP164Q9UPV0 1460 aa19.59■□□□□ 0.73
MIR9-3HG-201ENST00000536780 TNIKQ9UKE5 1360 aa19.57■□□□□ 0.72
MIR9-3HG-201ENST00000536780 CEP162Q5TB80 1403 aa19.55■□□□□ 0.72
MIR9-3HG-201ENST00000536780 ZNF777Q9ULD5 760 aaPredicted RBP19.55■□□□□ 0.72
MIR9-3HG-201ENST00000536780 CCDC88BA6NC98 1476 aa19.55■□□□□ 0.72
MIR9-3HG-201ENST00000536780 ERICH6Q7L0X2 663 aa19.52■□□□□ 0.72
MIR9-3HG-201ENST00000536780 ZNF316A6NFI3 1004 aaPredicted RBP19.49■□□□□ 0.71
MIR9-3HG-201ENST00000536780 TOP2AP11388 1531 aaKnown RBP19.49■□□□□ 0.71
MIR9-3HG-201ENST00000536780 MTUS2Q5JR59 1369 aa19.49■□□□□ 0.71
MIR9-3HG-201ENST00000536780 NPM1P06748 294 aaKnown RBP eCLIP19.48■□□□□ 0.71
MIR9-3HG-201ENST00000536780 ZNF326Q5BKZ1 582 aaKnown RBP19.43■□□□□ 0.7
MIR9-3HG-201ENST00000536780 CNGB1Q14028 1251 aaPredicted RBP19.41■□□□□ 0.7
MIR9-3HG-201ENST00000536780 SLC4A1APQ9BWU0 796 aaKnown RBP19.4■□□□□ 0.7
MIR9-3HG-201ENST00000536780 ANP32CO43423 234 aa19.39■□□□□ 0.7
MIR9-3HG-201ENST00000536780 ERCC6Q03468 1493 aa19.39■□□□□ 0.7
MIR9-3HG-201ENST00000536780 WIZO95785 1651 aa19.38■□□□□ 0.69
MIR9-3HG-201ENST00000536780 ATAD2BQ9ULI0 1458 aa19.36■□□□□ 0.69
MIR9-3HG-201ENST00000536780 SMARCA4P51532 1647 aa19.36■□□□□ 0.69
MIR9-3HG-201ENST00000536780 PDS5BQ9NTI5 1447 aa19.35■□□□□ 0.69
MIR9-3HG-201ENST00000536780 TONSLQ96HA7 1378 aa19.34■□□□□ 0.69
MIR9-3HG-201ENST00000536780 CUX2O14529 1486 aa19.33■□□□□ 0.69
MIR9-3HG-201ENST00000536780 TSPY4P0CV99 314 aa19.32■□□□□ 0.68
MIR9-3HG-201ENST00000536780 TSPY10P0CW01 314 aa19.32■□□□□ 0.68
MIR9-3HG-201ENST00000536780 SOGA1O94964 1423 aa19.32■□□□□ 0.68
MIR9-3HG-201ENST00000536780 CARMIL1Q5VZK9 1371 aa19.32■□□□□ 0.68
MIR9-3HG-201ENST00000536780 ACIN1Q9UKV3 1341 aaKnown RBP19.31■□□□□ 0.68
MIR9-3HG-201ENST00000536780 CADPSQ9ULU8 1353 aa19.27■□□□□ 0.68
MIR9-3HG-201ENST00000536780 PLEKHD1A6NEE1 506 aa19.27■□□□□ 0.68
MIR9-3HG-201ENST00000536780 ABCC8Q09428 1581 aa19.25■□□□□ 0.67
MIR9-3HG-201ENST00000536780 FHAD1B1AJZ9 1412 aa19.25■□□□□ 0.67
MIR9-3HG-201ENST00000536780 CHIC2Q9UKJ5 165 aa19.24■□□□□ 0.67
MIR9-3HG-201ENST00000536780 ESF1Q9H501 851 aaKnown RBP19.18■□□□□ 0.66
MIR9-3HG-201ENST00000536780 VPS8Q8N3P4 1428 aa19.1■□□□□ 0.65
MIR9-3HG-201ENST00000536780 CFDP1Q9UEE9 299 aaPredicted RBP19.09■□□□□ 0.65
MIR9-3HG-201ENST00000536780 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.06■□□□□ 0.64
MIR9-3HG-201ENST00000536780 BCANQ96GW7 911 aa19.06■□□□□ 0.64
MIR9-3HG-201ENST00000536780 RRP7BPQ9NSQ0 103 aa19.06■□□□□ 0.64
MIR9-3HG-201ENST00000536780 KCNH8Q96L42 1107 aa19.04■□□□□ 0.64
MIR9-3HG-201ENST00000536780 DAXXQ9UER7 740 aaPredicted RBP19.04■□□□□ 0.64
MIR9-3HG-201ENST00000536780 NCAPD3P42695 1498 aa19.03■□□□□ 0.64
MIR9-3HG-201ENST00000536780 EIF4G1Q04637 1599 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms