RNA–Protein interactions for RNA: ENST00000258387.5

PAX3-201, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 958 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-201ENST00000258387 NISCHQ9Y2I1 1504 aa46.59■■■■■ 5.05
PAX3-201ENST00000258387 ABCC9O60706 1549 aa41.88■■■■■ 4.29
PAX3-201ENST00000258387 CCDC180Q9P1Z9 1646 aa41.62■■■■■ 4.25
PAX3-201ENST00000258387 RB1CC1Q8TDY2 1594 aa39.73■■■■□ 3.95
PAX3-201ENST00000258387 DCAF8L2P0C7V8 631 aa39.65■■■■□ 3.94
PAX3-201ENST00000258387 NACADO15069 1562 aa39.46■■■■□ 3.91
PAX3-201ENST00000258387 DNAJC5BQ9UF47 199 aa39.37■■■■□ 3.89
PAX3-201ENST00000258387 PABPN1Q86U42 306 aaKnown RBP eCLIP39.14■■■■□ 3.86
PAX3-201ENST00000258387 MYO15BQ96JP2 1530 aa38.86■■■■□ 3.81
PAX3-201ENST00000258387 UNC13AQ9UPW8 1703 aa38.71■■■■□ 3.79
PAX3-201ENST00000258387 ZCCHC6Q5VYS8 1495 aaKnown RBP38.57■■■■□ 3.76
PAX3-201ENST00000258387 BICRAQ9NZM4 1560 aa38.57■■■■□ 3.76
PAX3-201ENST00000258387 DCAF1Q9Y4B6 1507 aa38.38■■■■□ 3.74
PAX3-201ENST00000258387 SCRIBQ14160 1630 aa38.1■■■■□ 3.69
PAX3-201ENST00000258387 SHROOM4Q9ULL8 1493 aa37.96■■■■□ 3.67
PAX3-201ENST00000258387 CC2D2AQ9P2K1 1620 aa37.72■■■■□ 3.63
PAX3-201ENST00000258387 CECR2Q9BXF3 1484 aa37.7■■■■□ 3.63
PAX3-201ENST00000258387 EIF4G1Q04637 1599 aaKnown RBP37.64■■■■□ 3.62
PAX3-201ENST00000258387 NCAPD3P42695 1498 aa36.5■■■■□ 3.43
PAX3-201ENST00000258387 ATAD2BQ9ULI0 1458 aa36.4■■■■□ 3.42
PAX3-201ENST00000258387 SMARCA4P51532 1647 aa36.28■■■■□ 3.4
PAX3-201ENST00000258387 SMARCA2P51531 1590 aa36.23■■■■□ 3.39
PAX3-201ENST00000258387 ERCC6Q03468 1493 aa36.15■■■■□ 3.38
PAX3-201ENST00000258387 BAZ1AQ9NRL2 1556 aaPredicted RBP36.13■■■■□ 3.37
PAX3-201ENST00000258387 HMGXB3Q12766 1538 aa36.12■■■■□ 3.37
PAX3-201ENST00000258387 DNAJC5Q9H3Z4 198 aa36.09■■■■□ 3.37
PAX3-201ENST00000258387 BAZ1BQ9UIG0 1483 aaKnown RBP36.05■■■■□ 3.36
PAX3-201ENST00000258387 CUX2O14529 1486 aa35.97■■■■□ 3.35
PAX3-201ENST00000258387 NESP48681 1621 aa35.97■■■■□ 3.35
PAX3-201ENST00000258387 MROH2BQ7Z745 1585 aa35.93■■■■□ 3.34
PAX3-201ENST00000258387 PEG3Q9GZU2 1588 aa35.88■■■■□ 3.33
PAX3-201ENST00000258387 LAMC3Q9Y6N6 1575 aa35.59■■■■□ 3.29
PAX3-201ENST00000258387 PDS5BQ9NTI5 1447 aa35.5■■■■□ 3.27
PAX3-201ENST00000258387 WIZO95785 1651 aa35.46■■■■□ 3.27
PAX3-201ENST00000258387 CADPSQ9ULU8 1353 aa35.45■■■■□ 3.27
PAX3-201ENST00000258387 THOC2Q8NI27 1593 aaKnown RBP35.43■■■■□ 3.26
PAX3-201ENST00000258387 KIF21AQ7Z4S6 1674 aa35.35■■■■□ 3.25
PAX3-201ENST00000258387 RSF1Q96T23 1441 aaPredicted RBP35.23■■■■□ 3.23
PAX3-201ENST00000258387 MRC2Q9UBG0 1479 aa35.15■■■■□ 3.22
PAX3-201ENST00000258387 CEP164Q9UPV0 1460 aa35.02■■■■□ 3.2
PAX3-201ENST00000258387 FANCD2Q9BXW9 1451 aa35.01■■■■□ 3.19
PAX3-201ENST00000258387 WDR62O43379 1518 aa35■■■■□ 3.19
PAX3-201ENST00000258387 TOP2AP11388 1531 aaKnown RBP34.99■■■■□ 3.19
PAX3-201ENST00000258387 CFTRP13569 1480 aa34.98■■■■□ 3.19
PAX3-201ENST00000258387 URB2Q14146 1524 aaKnown RBP34.71■■■■□ 3.15
PAX3-201ENST00000258387 CCDC88BA6NC98 1476 aa34.7■■■■□ 3.15
PAX3-201ENST00000258387 TRIM41Q8WV44 630 aa34.63■■■■□ 3.13
PAX3-201ENST00000258387 OSCARQ8IYS5 282 aa34.52■■■■□ 3.12
PAX3-201ENST00000258387 PRDM2Q13029 1718 aa34.4■■■■□ 3.1
PAX3-201ENST00000258387 IFT140Q96RY7 1462 aa34.33■■■■□ 3.09
PAX3-201ENST00000258387 TOPBP1Q92547 1522 aa34.32■■■■□ 3.08
PAX3-201ENST00000258387 ZNF608Q9ULD9 1512 aaPredicted RBP34.31■■■■□ 3.08
PAX3-201ENST00000258387 ABCC8Q09428 1581 aa34.23■■■■□ 3.07
PAX3-201ENST00000258387 DNMBPQ6XZF7 1577 aa34.15■■■■□ 3.06
PAX3-201ENST00000258387 AQRO60306 1485 aaKnown RBP eCLIP34.06■■■■□ 3.04
PAX3-201ENST00000258387 EIF4G3O43432 1585 aaKnown RBP34■■■■□ 3.03
PAX3-201ENST00000258387 POLA1P09884 1462 aaPredicted RBP33.98■■■■□ 3.03
PAX3-201ENST00000258387 FBLN2P98095 1184 aa33.96■■■■□ 3.03
PAX3-201ENST00000258387 TARBP1Q13395 1621 aaKnown RBP33.95■■■■□ 3.03
PAX3-201ENST00000258387 RAD54L2Q9Y4B4 1467 aa33.94■■■■□ 3.02
PAX3-201ENST00000258387 SOGA1O94964 1423 aa33.92■■■■□ 3.02
PAX3-201ENST00000258387 SUPT5HO00267 1087 aaKnown RBP33.9■■■■□ 3.02
PAX3-201ENST00000258387 RIMBP3CA6NJZ7 1639 aa33.89■■■■□ 3.02
PAX3-201ENST00000258387 RIMBP3BA6NNM3 1639 aa33.89■■■■□ 3.02
PAX3-201ENST00000258387 RIMBP3Q9UFD9 1639 aa33.89■■■■□ 3.02
PAX3-201ENST00000258387 TDRD9Q8NDG6 1382 aaKnown RBP33.88■■■■□ 3.01
PAX3-201ENST00000258387 ARHGEF11O15085 1522 aa33.81■■■■□ 3
PAX3-201ENST00000258387 FGD5Q6ZNL6 1462 aa33.78■■■■□ 3
PAX3-201ENST00000258387 CYB5RLQ6IPT4 315 aa33.77■■■■□ 3
PAX3-201ENST00000258387 CUX1P39880 1505 aa33.74■■■□□ 2.99
PAX3-201ENST00000258387 CHD1O14646 1710 aa33.71■■■□□ 2.99
PAX3-201ENST00000258387 CHMP7Q8WUX9 453 aaPredicted RBP33.66■■■□□ 2.98
PAX3-201ENST00000258387 SNAPC4Q5SXM2 1469 aa33.64■■■□□ 2.98
PAX3-201ENST00000258387 GRIN2BQ13224 1484 aa33.55■■■□□ 2.96
PAX3-201ENST00000258387 WDR97A6NE52 1622 aa33.52■■■□□ 2.96
PAX3-201ENST00000258387 MAGI1Q96QZ7 1491 aaPredicted RBP33.5■■■□□ 2.95
PAX3-201ENST00000258387 ARAP1Q96P48 1450 aa33.5■■■□□ 2.95
PAX3-201ENST00000258387 GAPVD1Q14C86 1478 aa33.44■■■□□ 2.94
PAX3-201ENST00000258387 TRHP20396 242 aaPredicted RBP33.42■■■□□ 2.94
PAX3-201ENST00000258387 SYNJ2O15056 1496 aa33.42■■■□□ 2.94
PAX3-201ENST00000258387 SYNJ1O43426 1573 aa33.38■■■□□ 2.93
PAX3-201ENST00000258387 CLASP1Q7Z460 1538 aa33.37■■■□□ 2.93
PAX3-201ENST00000258387 ABCA10Q8WWZ4 1543 aa33.37■■■□□ 2.93
PAX3-201ENST00000258387 WRNQ14191 1432 aaPredicted RBP eCLIP33.31■■■□□ 2.92
PAX3-201ENST00000258387 PBRM1Q86U86 1689 aa33.27■■■□□ 2.92
PAX3-201ENST00000258387 ABCA5Q8WWZ7 1642 aa33.24■■■□□ 2.91
PAX3-201ENST00000258387 TOP2BQ02880 1626 aa33.15■■■□□ 2.9
PAX3-201ENST00000258387 GRIN2AQ12879 1464 aa33.1■■■□□ 2.89
PAX3-201ENST00000258387 BIVM-ERCC5R4GMW8 1640 aa33.1■■■□□ 2.89
PAX3-201ENST00000258387 FHAD1B1AJZ9 1412 aa33.02■■■□□ 2.88
PAX3-201ENST00000258387 ADAMTS12P58397 1594 aa33.01■■■□□ 2.88
PAX3-201ENST00000258387 NUP160Q12769 1436 aa32.97■■■□□ 2.87
PAX3-201ENST00000258387 CEP170Q5SW79 1584 aa32.95■■■□□ 2.86
PAX3-201ENST00000258387 ERCC6L2Q5T890 1561 aa32.93■■■□□ 2.86
PAX3-201ENST00000258387 ERICH3Q5RHP9 1530 aa32.92■■■□□ 2.86
PAX3-201ENST00000258387 JPH4Q96JJ6 628 aa32.8■■■□□ 2.84
PAX3-201ENST00000258387 PRG4Q92954 1404 aaPredicted RBP32.75■■■□□ 2.83
PAX3-201ENST00000258387 SHROOM2Q13796 1616 aa32.73■■■□□ 2.83
PAX3-201ENST00000258387 IGF1RP08069 1367 aa32.65■■■□□ 2.82
PAX3-201ENST00000258387 KIF27Q86VH2 1401 aa32.62■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms