RNA–Protein interactions for RNA: ENST00000258387.5

PAX3-201, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-201ENST00000258387 NISCHQ9Y2I1 1504 aa46.59■■■■■ 5.05
PAX3-201ENST00000258387 ABCC9O60706 1549 aa41.88■■■■■ 4.29
PAX3-201ENST00000258387 CCDC180Q9P1Z9 1646 aa41.62■■■■■ 4.25
PAX3-201ENST00000258387 RB1CC1Q8TDY2 1594 aa39.73■■■■□ 3.95
PAX3-201ENST00000258387 DCAF8L2P0C7V8 631 aa39.65■■■■□ 3.94
PAX3-201ENST00000258387 NACADO15069 1562 aa39.46■■■■□ 3.91
PAX3-201ENST00000258387 DNAJC5BQ9UF47 199 aa39.37■■■■□ 3.89
PAX3-201ENST00000258387 PABPN1Q86U42 306 aaKnown RBP eCLIP39.14■■■■□ 3.86
PAX3-201ENST00000258387 MYO15BQ96JP2 1530 aa38.86■■■■□ 3.81
PAX3-201ENST00000258387 UNC13AQ9UPW8 1703 aa38.71■■■■□ 3.79
PAX3-201ENST00000258387 ZCCHC6Q5VYS8 1495 aaKnown RBP38.57■■■■□ 3.76
PAX3-201ENST00000258387 BICRAQ9NZM4 1560 aa38.57■■■■□ 3.76
PAX3-201ENST00000258387 DCAF1Q9Y4B6 1507 aa38.38■■■■□ 3.74
PAX3-201ENST00000258387 SCRIBQ14160 1630 aa38.1■■■■□ 3.69
PAX3-201ENST00000258387 SHROOM4Q9ULL8 1493 aa37.96■■■■□ 3.67
PAX3-201ENST00000258387 CC2D2AQ9P2K1 1620 aa37.72■■■■□ 3.63
PAX3-201ENST00000258387 CECR2Q9BXF3 1484 aa37.7■■■■□ 3.63
PAX3-201ENST00000258387 EIF4G1Q04637 1599 aaKnown RBP37.64■■■■□ 3.62
PAX3-201ENST00000258387 NCAPD3P42695 1498 aa36.5■■■■□ 3.43
PAX3-201ENST00000258387 ATAD2BQ9ULI0 1458 aa36.4■■■■□ 3.42
PAX3-201ENST00000258387 SMARCA4P51532 1647 aa36.28■■■■□ 3.4
PAX3-201ENST00000258387 SMARCA2P51531 1590 aa36.23■■■■□ 3.39
PAX3-201ENST00000258387 ERCC6Q03468 1493 aa36.15■■■■□ 3.38
PAX3-201ENST00000258387 BAZ1AQ9NRL2 1556 aaPredicted RBP36.13■■■■□ 3.37
PAX3-201ENST00000258387 HMGXB3Q12766 1538 aa36.12■■■■□ 3.37
PAX3-201ENST00000258387 DNAJC5Q9H3Z4 198 aa36.09■■■■□ 3.37
PAX3-201ENST00000258387 BAZ1BQ9UIG0 1483 aaKnown RBP36.05■■■■□ 3.36
PAX3-201ENST00000258387 CUX2O14529 1486 aa35.97■■■■□ 3.35
PAX3-201ENST00000258387 NESP48681 1621 aa35.97■■■■□ 3.35
PAX3-201ENST00000258387 MROH2BQ7Z745 1585 aa35.93■■■■□ 3.34
PAX3-201ENST00000258387 PEG3Q9GZU2 1588 aa35.88■■■■□ 3.33
PAX3-201ENST00000258387 LAMC3Q9Y6N6 1575 aa35.59■■■■□ 3.29
PAX3-201ENST00000258387 PDS5BQ9NTI5 1447 aa35.5■■■■□ 3.27
PAX3-201ENST00000258387 WIZO95785 1651 aa35.46■■■■□ 3.27
PAX3-201ENST00000258387 CADPSQ9ULU8 1353 aa35.45■■■■□ 3.27
PAX3-201ENST00000258387 THOC2Q8NI27 1593 aaKnown RBP35.43■■■■□ 3.26
PAX3-201ENST00000258387 KIF21AQ7Z4S6 1674 aa35.35■■■■□ 3.25
PAX3-201ENST00000258387 RSF1Q96T23 1441 aaPredicted RBP35.23■■■■□ 3.23
PAX3-201ENST00000258387 MRC2Q9UBG0 1479 aa35.15■■■■□ 3.22
PAX3-201ENST00000258387 CEP164Q9UPV0 1460 aa35.02■■■■□ 3.2
PAX3-201ENST00000258387 FANCD2Q9BXW9 1451 aa35.01■■■■□ 3.19
PAX3-201ENST00000258387 WDR62O43379 1518 aa35■■■■□ 3.19
PAX3-201ENST00000258387 TOP2AP11388 1531 aaKnown RBP34.99■■■■□ 3.19
PAX3-201ENST00000258387 CFTRP13569 1480 aa34.98■■■■□ 3.19
PAX3-201ENST00000258387 URB2Q14146 1524 aaKnown RBP34.71■■■■□ 3.15
PAX3-201ENST00000258387 CCDC88BA6NC98 1476 aa34.7■■■■□ 3.15
PAX3-201ENST00000258387 TRIM41Q8WV44 630 aa34.63■■■■□ 3.13
PAX3-201ENST00000258387 OSCARQ8IYS5 282 aa34.52■■■■□ 3.12
PAX3-201ENST00000258387 PRDM2Q13029 1718 aa34.4■■■■□ 3.1
PAX3-201ENST00000258387 IFT140Q96RY7 1462 aa34.33■■■■□ 3.09
PAX3-201ENST00000258387 TOPBP1Q92547 1522 aa34.32■■■■□ 3.08
PAX3-201ENST00000258387 ZNF608Q9ULD9 1512 aaPredicted RBP34.31■■■■□ 3.08
PAX3-201ENST00000258387 ABCC8Q09428 1581 aa34.23■■■■□ 3.07
PAX3-201ENST00000258387 DNMBPQ6XZF7 1577 aa34.15■■■■□ 3.06
PAX3-201ENST00000258387 AQRO60306 1485 aaKnown RBP eCLIP34.06■■■■□ 3.04
PAX3-201ENST00000258387 EIF4G3O43432 1585 aaKnown RBP34■■■■□ 3.03
PAX3-201ENST00000258387 POLA1P09884 1462 aaPredicted RBP33.98■■■■□ 3.03
PAX3-201ENST00000258387 FBLN2P98095 1184 aa33.96■■■■□ 3.03
PAX3-201ENST00000258387 TARBP1Q13395 1621 aaKnown RBP33.95■■■■□ 3.03
PAX3-201ENST00000258387 RAD54L2Q9Y4B4 1467 aa33.94■■■■□ 3.02
PAX3-201ENST00000258387 SOGA1O94964 1423 aa33.92■■■■□ 3.02
PAX3-201ENST00000258387 SUPT5HO00267 1087 aaKnown RBP33.9■■■■□ 3.02
PAX3-201ENST00000258387 RIMBP3CA6NJZ7 1639 aa33.89■■■■□ 3.02
PAX3-201ENST00000258387 RIMBP3BA6NNM3 1639 aa33.89■■■■□ 3.02
PAX3-201ENST00000258387 RIMBP3Q9UFD9 1639 aa33.89■■■■□ 3.02
PAX3-201ENST00000258387 TDRD9Q8NDG6 1382 aaKnown RBP33.88■■■■□ 3.01
PAX3-201ENST00000258387 ARHGEF11O15085 1522 aa33.81■■■■□ 3
PAX3-201ENST00000258387 FGD5Q6ZNL6 1462 aa33.78■■■■□ 3
PAX3-201ENST00000258387 CYB5RLQ6IPT4 315 aa33.77■■■■□ 3
PAX3-201ENST00000258387 CUX1P39880 1505 aa33.74■■■□□ 2.99
PAX3-201ENST00000258387 CHD1O14646 1710 aa33.71■■■□□ 2.99
PAX3-201ENST00000258387 CHMP7Q8WUX9 453 aaPredicted RBP33.66■■■□□ 2.98
PAX3-201ENST00000258387 SNAPC4Q5SXM2 1469 aa33.64■■■□□ 2.98
PAX3-201ENST00000258387 GRIN2BQ13224 1484 aa33.55■■■□□ 2.96
PAX3-201ENST00000258387 WDR97A6NE52 1622 aa33.52■■■□□ 2.96
PAX3-201ENST00000258387 MAGI1Q96QZ7 1491 aaPredicted RBP33.5■■■□□ 2.95
PAX3-201ENST00000258387 ARAP1Q96P48 1450 aa33.5■■■□□ 2.95
PAX3-201ENST00000258387 GAPVD1Q14C86 1478 aa33.44■■■□□ 2.94
PAX3-201ENST00000258387 TRHP20396 242 aaPredicted RBP33.42■■■□□ 2.94
PAX3-201ENST00000258387 SYNJ2O15056 1496 aa33.42■■■□□ 2.94
PAX3-201ENST00000258387 SYNJ1O43426 1573 aa33.38■■■□□ 2.93
PAX3-201ENST00000258387 CLASP1Q7Z460 1538 aa33.37■■■□□ 2.93
PAX3-201ENST00000258387 ABCA10Q8WWZ4 1543 aa33.37■■■□□ 2.93
PAX3-201ENST00000258387 WRNQ14191 1432 aaPredicted RBP eCLIP33.31■■■□□ 2.92
PAX3-201ENST00000258387 PBRM1Q86U86 1689 aa33.27■■■□□ 2.92
PAX3-201ENST00000258387 ABCA5Q8WWZ7 1642 aa33.24■■■□□ 2.91
PAX3-201ENST00000258387 TOP2BQ02880 1626 aa33.15■■■□□ 2.9
PAX3-201ENST00000258387 GRIN2AQ12879 1464 aa33.1■■■□□ 2.89
PAX3-201ENST00000258387 BIVM-ERCC5R4GMW8 1640 aa33.1■■■□□ 2.89
PAX3-201ENST00000258387 FHAD1B1AJZ9 1412 aa33.02■■■□□ 2.88
PAX3-201ENST00000258387 ADAMTS12P58397 1594 aa33.01■■■□□ 2.88
PAX3-201ENST00000258387 NUP160Q12769 1436 aa32.97■■■□□ 2.87
PAX3-201ENST00000258387 CEP170Q5SW79 1584 aa32.95■■■□□ 2.86
PAX3-201ENST00000258387 ERCC6L2Q5T890 1561 aa32.93■■■□□ 2.86
PAX3-201ENST00000258387 ERICH3Q5RHP9 1530 aa32.92■■■□□ 2.86
PAX3-201ENST00000258387 JPH4Q96JJ6 628 aa32.8■■■□□ 2.84
PAX3-201ENST00000258387 PRG4Q92954 1404 aaPredicted RBP32.75■■■□□ 2.83
PAX3-201ENST00000258387 SHROOM2Q13796 1616 aa32.73■■■□□ 2.83
PAX3-201ENST00000258387 IGF1RP08069 1367 aa32.65■■■□□ 2.82
PAX3-201ENST00000258387 KIF27Q86VH2 1401 aa32.62■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms