RNA–Protein interactions for RNA: ENST00000441259.1

PRF1-202, Transcript of perforin 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRF1, Length 2,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRF1-202ENST00000441259 NISCHQ9Y2I1 1504 aa30.19■■■□□ 2.42
PRF1-202ENST00000441259 CCDC180Q9P1Z9 1646 aa26.03■■□□□ 1.76
PRF1-202ENST00000441259 DCAF8L2P0C7V8 631 aa25.5■■□□□ 1.67
PRF1-202ENST00000441259 SHROOM4Q9ULL8 1493 aa25.44■■□□□ 1.66
PRF1-202ENST00000441259 ZCCHC6Q5VYS8 1495 aaKnown RBP25.31■■□□□ 1.64
PRF1-202ENST00000441259 ABCC9O60706 1549 aa25.08■■□□□ 1.61
PRF1-202ENST00000441259 SUPT5HO00267 1087 aaKnown RBP24.93■■□□□ 1.58
PRF1-202ENST00000441259 DCAF1Q9Y4B6 1507 aa24.73■■□□□ 1.55
PRF1-202ENST00000441259 MYO15BQ96JP2 1530 aa24.38■■□□□ 1.49
PRF1-202ENST00000441259 NACADO15069 1562 aa24.36■■□□□ 1.49
PRF1-202ENST00000441259 SCRIBQ14160 1630 aa24.31■■□□□ 1.48
PRF1-202ENST00000441259 RB1CC1Q8TDY2 1594 aa24.18■■□□□ 1.46
PRF1-202ENST00000441259 CHIC1Q5VXU3 224 aa24.09■■□□□ 1.45
PRF1-202ENST00000441259 PABPN1Q86U42 306 aaKnown RBP eCLIP23.85■■□□□ 1.41
PRF1-202ENST00000441259 PELP1Q8IZL8 1130 aaKnown RBP23.8■■□□□ 1.4
PRF1-202ENST00000441259 HRCP23327 699 aa23.73■■□□□ 1.39
PRF1-202ENST00000441259 UNC13AQ9UPW8 1703 aa23.71■■□□□ 1.39
PRF1-202ENST00000441259 CECR2Q9BXF3 1484 aa23.65■■□□□ 1.38
PRF1-202ENST00000441259 LOC105371045A0A1W2PR82 267 aa23.57■■□□□ 1.36
PRF1-202ENST00000441259 PCGF6Q9BYE7 350 aa23.56■■□□□ 1.36
PRF1-202ENST00000441259 RSF1Q96T23 1441 aaPredicted RBP23.54■■□□□ 1.36
PRF1-202ENST00000441259 BICRAQ9NZM4 1560 aa23.53■■□□□ 1.36
PRF1-202ENST00000441259 PPARGC1BQ86YN6 1023 aaKnown RBP23.46■■□□□ 1.35
PRF1-202ENST00000441259 MROH2BQ7Z745 1585 aa23.43■■□□□ 1.34
PRF1-202ENST00000441259 BAZ1AQ9NRL2 1556 aaPredicted RBP23.25■■□□□ 1.31
PRF1-202ENST00000441259 WIZO95785 1651 aa23.23■■□□□ 1.31
PRF1-202ENST00000441259 SMARCA4P51532 1647 aa23.16■■□□□ 1.3
PRF1-202ENST00000441259 MYT1Q01538 1121 aa23.12■■□□□ 1.29
PRF1-202ENST00000441259 FAM9AQ8IZU1 332 aaPredicted RBP23.12■■□□□ 1.29
PRF1-202ENST00000441259 EHMT2Q96KQ7 1210 aa23.1■■□□□ 1.29
PRF1-202ENST00000441259 TRIM41Q8WV44 630 aa23.08■■□□□ 1.28
PRF1-202ENST00000441259 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
PRF1-202ENST00000441259 TRIM26Q12899 539 aaPredicted RBP22.84■■□□□ 1.25
PRF1-202ENST00000441259 TOP2AP11388 1531 aaKnown RBP22.84■■□□□ 1.25
PRF1-202ENST00000441259 EIF4G1Q04637 1599 aaKnown RBP22.83■■□□□ 1.25
PRF1-202ENST00000441259 CCDC88BA6NC98 1476 aa22.78■■□□□ 1.24
PRF1-202ENST00000441259 PEG3Q9GZU2 1588 aa22.74■■□□□ 1.23
PRF1-202ENST00000441259 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
PRF1-202ENST00000441259 SMARCA2P51531 1590 aa22.71■■□□□ 1.23
PRF1-202ENST00000441259 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
PRF1-202ENST00000441259 NCAPD3P42695 1498 aa22.57■■□□□ 1.2
PRF1-202ENST00000441259 CC2D2AQ9P2K1 1620 aa22.52■■□□□ 1.2
PRF1-202ENST00000441259 HMGXB3Q12766 1538 aa22.43■■□□□ 1.18
PRF1-202ENST00000441259 ABCC8Q09428 1581 aa22.38■■□□□ 1.17
PRF1-202ENST00000441259 DNAJC5BQ9UF47 199 aa22.37■■□□□ 1.17
PRF1-202ENST00000441259 ZEB1P37275 1124 aaPredicted RBP22.34■■□□□ 1.17
PRF1-202ENST00000441259 TTBK1Q5TCY1 1321 aaPredicted RBP22.31■■□□□ 1.16
PRF1-202ENST00000441259 SOGA1O94964 1423 aa22.17■■□□□ 1.14
PRF1-202ENST00000441259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.15■■□□□ 1.14
PRF1-202ENST00000441259 WRNQ14191 1432 aaPredicted RBP eCLIP22.15■■□□□ 1.14
PRF1-202ENST00000441259 CFTRP13569 1480 aa22.12■■□□□ 1.13
PRF1-202ENST00000441259 CADPSQ9ULU8 1353 aa22.11■■□□□ 1.13
PRF1-202ENST00000441259 RUSC2Q8N2Y8 1516 aa22.1■■□□□ 1.13
PRF1-202ENST00000441259 NESP48681 1621 aa22.03■■□□□ 1.12
PRF1-202ENST00000441259 UBTFP17480 764 aaKnown RBP22.03■■□□□ 1.12
PRF1-202ENST00000441259 SYNJ1O43426 1573 aa22.02■■□□□ 1.12
PRF1-202ENST00000441259 CCER1Q8TC90 406 aaPredicted RBP22■■□□□ 1.11
PRF1-202ENST00000441259 CEP162Q5TB80 1403 aa21.99■■□□□ 1.11
PRF1-202ENST00000441259 CSRNP3Q8WYN3 585 aa21.99■■□□□ 1.11
PRF1-202ENST00000441259 TNIKQ9UKE5 1360 aa21.87■■□□□ 1.09
PRF1-202ENST00000441259 NEUROD1Q13562 356 aa21.86■■□□□ 1.09
PRF1-202ENST00000441259 CUX1P39880 1505 aa21.86■■□□□ 1.09
PRF1-202ENST00000441259 FANCD2Q9BXW9 1451 aa21.86■■□□□ 1.09
PRF1-202ENST00000441259 RANGAP1P46060 587 aaPredicted RBP21.84■■□□□ 1.09
PRF1-202ENST00000441259 ACIN1Q9UKV3 1341 aaKnown RBP21.83■■□□□ 1.08
PRF1-202ENST00000441259 TOP2BQ02880 1626 aa21.83■■□□□ 1.08
PRF1-202ENST00000441259 EEA1Q15075 1411 aa21.75■■□□□ 1.07
PRF1-202ENST00000441259 PRDM2Q13029 1718 aa21.74■■□□□ 1.07
PRF1-202ENST00000441259 GOLGA3Q08378 1498 aa21.74■■□□□ 1.07
PRF1-202ENST00000441259 LAMC3Q9Y6N6 1575 aa21.73■■□□□ 1.07
PRF1-202ENST00000441259 BIVM-ERCC5R4GMW8 1640 aa21.73■■□□□ 1.07
PRF1-202ENST00000441259 GTF3C3Q9Y5Q9 886 aa21.7■■□□□ 1.06
PRF1-202ENST00000441259 DIEXFQ68CQ4 756 aaKnown RBP21.69■■□□□ 1.06
PRF1-202ENST00000441259 PDS5BQ9NTI5 1447 aa21.69■■□□□ 1.06
PRF1-202ENST00000441259 CEP164Q9UPV0 1460 aa21.67■■□□□ 1.06
PRF1-202ENST00000441259 FGD5Q6ZNL6 1462 aa21.64■■□□□ 1.05
PRF1-202ENST00000441259 HNRNPUL2Q1KMD3 747 aaKnown RBP21.64■■□□□ 1.05
PRF1-202ENST00000441259 TOPBP1Q92547 1522 aa21.59■■□□□ 1.05
PRF1-202ENST00000441259 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.05
PRF1-202ENST00000441259 URB2Q14146 1524 aaKnown RBP21.58■■□□□ 1.05
PRF1-202ENST00000441259 RAPGEF2Q9Y4G8 1499 aa21.58■■□□□ 1.05
PRF1-202ENST00000441259 CLIP1P30622 1438 aa21.57■■□□□ 1.04
PRF1-202ENST00000441259 KIF21AQ7Z4S6 1674 aa21.56■■□□□ 1.04
PRF1-202ENST00000441259 CUX2O14529 1486 aa21.56■■□□□ 1.04
PRF1-202ENST00000441259 KIF27Q86VH2 1401 aa21.56■■□□□ 1.04
PRF1-202ENST00000441259 CENPBP07199 599 aaPredicted RBP21.55■■□□□ 1.04
PRF1-202ENST00000441259 DNMBPQ6XZF7 1577 aa21.54■■□□□ 1.04
PRF1-202ENST00000441259 BCL11AQ9H165 835 aa21.53■■□□□ 1.04
PRF1-202ENST00000441259 POLA1P09884 1462 aaPredicted RBP21.52■■□□□ 1.04
PRF1-202ENST00000441259 KIF21BO75037 1637 aa21.5■■□□□ 1.03
PRF1-202ENST00000441259 APLP2Q06481 763 aa21.45■■□□□ 1.02
PRF1-202ENST00000441259 IGF1RP08069 1367 aa21.44■■□□□ 1.02
PRF1-202ENST00000441259 YTHDC1Q96MU7 727 aaKnown RBP21.44■■□□□ 1.02
PRF1-202ENST00000441259 ERCC6Q03468 1493 aa21.44■■□□□ 1.02
PRF1-202ENST00000441259 TDRD9Q8NDG6 1382 aaKnown RBP21.44■■□□□ 1.02
PRF1-202ENST00000441259 VPS8Q8N3P4 1428 aa21.42■■□□□ 1.02
PRF1-202ENST00000441259 PRXQ9BXM0 1461 aa21.38■■□□□ 1.01
PRF1-202ENST00000441259 MRC2Q9UBG0 1479 aa21.37■■□□□ 1.01
PRF1-202ENST00000441259 ABCA10Q8WWZ4 1543 aa21.35■■□□□ 1.01
PRF1-202ENST00000441259 CARMIL1Q5VZK9 1371 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms