RNA–Protein interactions for RNA: ENST00000332558.8

FLJ40288-201, humanhuman

TSL 2 BASIC

Gene FLJ40288, Length 1,998 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLJ40288-201ENST00000332558 NISCHQ9Y2I1 1504 aa28.31■■■□□ 2.12
FLJ40288-201ENST00000332558 SHROOM4Q9ULL8 1493 aa24.12■■□□□ 1.45
FLJ40288-201ENST00000332558 ZCCHC6Q5VYS8 1495 aaKnown RBP24.08■■□□□ 1.45
FLJ40288-201ENST00000332558 CCDC180Q9P1Z9 1646 aa23.97■■□□□ 1.43
FLJ40288-201ENST00000332558 SUPT5HO00267 1087 aaKnown RBP23.85■■□□□ 1.41
FLJ40288-201ENST00000332558 HRCP23327 699 aa23.65■■□□□ 1.38
FLJ40288-201ENST00000332558 MYO15BQ96JP2 1530 aa23.63■■□□□ 1.37
FLJ40288-201ENST00000332558 CHIC1Q5VXU3 224 aa23.6■■□□□ 1.37
FLJ40288-201ENST00000332558 DCAF1Q9Y4B6 1507 aa23.39■■□□□ 1.33
FLJ40288-201ENST00000332558 PCGF6Q9BYE7 350 aa23.15■■□□□ 1.3
FLJ40288-201ENST00000332558 DCAF8L2P0C7V8 631 aa22.9■■□□□ 1.26
FLJ40288-201ENST00000332558 PPARGC1BQ86YN6 1023 aaKnown RBP22.88■■□□□ 1.25
FLJ40288-201ENST00000332558 ABCC9O60706 1549 aa22.81■■□□□ 1.24
FLJ40288-201ENST00000332558 TRIM26Q12899 539 aaPredicted RBP22.78■■□□□ 1.24
FLJ40288-201ENST00000332558 LOC105371045A0A1W2PR82 267 aa22.77■■□□□ 1.24
FLJ40288-201ENST00000332558 ZEB1P37275 1124 aaPredicted RBP22.56■■□□□ 1.2
FLJ40288-201ENST00000332558 RSF1Q96T23 1441 aaPredicted RBP22.54■■□□□ 1.2
FLJ40288-201ENST00000332558 RB1CC1Q8TDY2 1594 aa22.41■■□□□ 1.18
FLJ40288-201ENST00000332558 SCRIBQ14160 1630 aa22.32■■□□□ 1.16
FLJ40288-201ENST00000332558 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
FLJ40288-201ENST00000332558 PELP1Q8IZL8 1130 aaKnown RBP22.25■■□□□ 1.15
FLJ40288-201ENST00000332558 NACADO15069 1562 aa22.02■■□□□ 1.12
FLJ40288-201ENST00000332558 SCAF1Q9H7N4 1312 aaKnown RBP21.98■■□□□ 1.11
FLJ40288-201ENST00000332558 MROH2BQ7Z745 1585 aa21.98■■□□□ 1.11
FLJ40288-201ENST00000332558 FAM9AQ8IZU1 332 aaPredicted RBP21.97■■□□□ 1.11
FLJ40288-201ENST00000332558 CECR2Q9BXF3 1484 aa21.95■■□□□ 1.1
FLJ40288-201ENST00000332558 EIF4G1Q04637 1599 aaKnown RBP21.94■■□□□ 1.1
FLJ40288-201ENST00000332558 BAZ1AQ9NRL2 1556 aaPredicted RBP21.88■■□□□ 1.09
FLJ40288-201ENST00000332558 WIZO95785 1651 aa21.85■■□□□ 1.09
FLJ40288-201ENST00000332558 WRNQ14191 1432 aaPredicted RBP eCLIP21.77■■□□□ 1.08
FLJ40288-201ENST00000332558 ACIN1Q9UKV3 1341 aaKnown RBP21.68■■□□□ 1.06
FLJ40288-201ENST00000332558 TOP2AP11388 1531 aaKnown RBP21.63■■□□□ 1.05
FLJ40288-201ENST00000332558 CCER1Q8TC90 406 aaPredicted RBP21.63■■□□□ 1.05
FLJ40288-201ENST00000332558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.62■■□□□ 1.05
FLJ40288-201ENST00000332558 EHMT2Q96KQ7 1210 aa21.62■■□□□ 1.05
FLJ40288-201ENST00000332558 NEUROD1Q13562 356 aa21.54■■□□□ 1.04
FLJ40288-201ENST00000332558 TNIKQ9UKE5 1360 aa21.53■■□□□ 1.04
FLJ40288-201ENST00000332558 CEP162Q5TB80 1403 aa21.52■■□□□ 1.04
FLJ40288-201ENST00000332558 EEA1Q15075 1411 aa21.52■■□□□ 1.03
FLJ40288-201ENST00000332558 CCDC88BA6NC98 1476 aa21.5■■□□□ 1.03
FLJ40288-201ENST00000332558 SMARCA2P51531 1590 aa21.49■■□□□ 1.03
FLJ40288-201ENST00000332558 DIEXFQ68CQ4 756 aaKnown RBP21.49■■□□□ 1.03
FLJ40288-201ENST00000332558 CENPBP07199 599 aaPredicted RBP21.47■■□□□ 1.03
FLJ40288-201ENST00000332558 ABCC8Q09428 1581 aa21.47■■□□□ 1.03
FLJ40288-201ENST00000332558 SMARCA4P51532 1647 aa21.47■■□□□ 1.03
FLJ40288-201ENST00000332558 SOGA1O94964 1423 aa21.37■■□□□ 1.01
FLJ40288-201ENST00000332558 GTF3C3Q9Y5Q9 886 aa21.34■■□□□ 1.01
FLJ40288-201ENST00000332558 GOLGA3Q08378 1498 aa21.31■■□□□ 1
FLJ40288-201ENST00000332558 MYT1Q01538 1121 aa21.3■■□□□ 1
FLJ40288-201ENST00000332558 CSRNP3Q8WYN3 585 aa21.3■■□□□ 1
FLJ40288-201ENST00000332558 ZNF316A6NFI3 1004 aaPredicted RBP21.28■■□□□ 1
FLJ40288-201ENST00000332558 RUSC2Q8N2Y8 1516 aa21.23■□□□□ 0.99
FLJ40288-201ENST00000332558 KIF21BO75037 1637 aa21.2■□□□□ 0.98
FLJ40288-201ENST00000332558 UNC13AQ9UPW8 1703 aa21.18■□□□□ 0.98
FLJ40288-201ENST00000332558 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
FLJ40288-201ENST00000332558 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.98
FLJ40288-201ENST00000332558 UBTFP17480 764 aaKnown RBP21.11■□□□□ 0.97
FLJ40288-201ENST00000332558 TTBK1Q5TCY1 1321 aaPredicted RBP21.09■□□□□ 0.97
FLJ40288-201ENST00000332558 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.96
FLJ40288-201ENST00000332558 BAZ1BQ9UIG0 1483 aaKnown RBP21.08■□□□□ 0.96
FLJ40288-201ENST00000332558 VPS8Q8N3P4 1428 aa21.05■□□□□ 0.96
FLJ40288-201ENST00000332558 BICRAQ9NZM4 1560 aa21.03■□□□□ 0.96
FLJ40288-201ENST00000332558 CLIP1P30622 1438 aa21.03■□□□□ 0.96
FLJ40288-201ENST00000332558 SYNJ1O43426 1573 aa21.02■□□□□ 0.96
FLJ40288-201ENST00000332558 MIER1Q8N108 512 aa20.97■□□□□ 0.95
FLJ40288-201ENST00000332558 CLSPNQ9HAW4 1339 aa20.92■□□□□ 0.94
FLJ40288-201ENST00000332558 HNRNPUL2Q1KMD3 747 aaKnown RBP20.88■□□□□ 0.93
FLJ40288-201ENST00000332558 RAPGEF2Q9Y4G8 1499 aa20.86■□□□□ 0.93
FLJ40288-201ENST00000332558 YTHDC1Q96MU7 727 aaKnown RBP20.84■□□□□ 0.93
FLJ40288-201ENST00000332558 TOP2BQ02880 1626 aa20.79■□□□□ 0.92
FLJ40288-201ENST00000332558 ERICH3Q5RHP9 1530 aa20.79■□□□□ 0.92
FLJ40288-201ENST00000332558 ATAD2BQ9ULI0 1458 aa20.79■□□□□ 0.92
FLJ40288-201ENST00000332558 APLP2Q06481 763 aa20.77■□□□□ 0.92
FLJ40288-201ENST00000332558 DHX57Q6P158 1386 aaKnown RBP20.75■□□□□ 0.91
FLJ40288-201ENST00000332558 BIVM-ERCC5R4GMW8 1640 aa20.74■□□□□ 0.91
FLJ40288-201ENST00000332558 PRXQ9BXM0 1461 aa20.71■□□□□ 0.91
FLJ40288-201ENST00000332558 CUX2O14529 1486 aa20.71■□□□□ 0.91
FLJ40288-201ENST00000332558 ARAP1Q96P48 1450 aa20.69■□□□□ 0.9
FLJ40288-201ENST00000332558 RRBP1Q9P2E9 1410 aaKnown RBP20.67■□□□□ 0.9
FLJ40288-201ENST00000332558 SUPT16HQ9Y5B9 1047 aaKnown RBP20.53■□□□□ 0.88
FLJ40288-201ENST00000332558 KANK4Q5T7N3 995 aaPredicted RBP20.5■□□□□ 0.87
FLJ40288-201ENST00000332558 CCNB3Q8WWL7 1395 aa20.46■□□□□ 0.87
FLJ40288-201ENST00000332558 KIF27Q86VH2 1401 aa20.45■□□□□ 0.86
FLJ40288-201ENST00000332558 CUX1P39880 1505 aa20.45■□□□□ 0.86
FLJ40288-201ENST00000332558 MAP3K1Q13233 1512 aa20.44■□□□□ 0.86
FLJ40288-201ENST00000332558 ARHGAP35Q9NRY4 1499 aa20.42■□□□□ 0.86
FLJ40288-201ENST00000332558 HMGXB3Q12766 1538 aa20.42■□□□□ 0.86
FLJ40288-201ENST00000332558 RANGAP1P46060 587 aaPredicted RBP20.39■□□□□ 0.85
FLJ40288-201ENST00000332558 MAPKBP1O60336 1514 aa20.38■□□□□ 0.85
FLJ40288-201ENST00000332558 NCAPD3P42695 1498 aa20.36■□□□□ 0.85
FLJ40288-201ENST00000332558 TSHZ2Q9NRE2 1034 aa20.33■□□□□ 0.84
FLJ40288-201ENST00000332558 TIAM1Q13009 1591 aa20.31■□□□□ 0.84
FLJ40288-201ENST00000332558 RAB3GAP2Q9H2M9 1393 aa20.31■□□□□ 0.84
FLJ40288-201ENST00000332558 CFTRP13569 1480 aa20.3■□□□□ 0.84
FLJ40288-201ENST00000332558 SETD5Q9C0A6 1442 aa20.25■□□□□ 0.83
FLJ40288-201ENST00000332558 TIMELESSQ9UNS1 1208 aa20.21■□□□□ 0.83
FLJ40288-201ENST00000332558 PRDM2Q13029 1718 aa20.21■□□□□ 0.83
FLJ40288-201ENST00000332558 LRRC9Q6ZRR7 1453 aa20.21■□□□□ 0.83
FLJ40288-201ENST00000332558 CFAP43Q8NDM7 1665 aa20.18■□□□□ 0.82
FLJ40288-201ENST00000332558 IGF1RP08069 1367 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms