RNA–Protein interactions for RNA: ENST00000371945.8

MKNK1-203, Transcript of MAP kinase interacting serine/threonine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MKNK1, Length 2,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKNK1-203ENST00000371945 NISCHQ9Y2I1 1504 aa28.13■■■□□ 2.09
MKNK1-203ENST00000371945 CCDC180Q9P1Z9 1646 aa24.5■■□□□ 1.51
MKNK1-203ENST00000371945 ZCCHC6Q5VYS8 1495 aaKnown RBP23.66■■□□□ 1.38
MKNK1-203ENST00000371945 PELP1Q8IZL8 1130 aaKnown RBP23.46■■□□□ 1.35
MKNK1-203ENST00000371945 DCAF1Q9Y4B6 1507 aa23.3■■□□□ 1.32
MKNK1-203ENST00000371945 DCAF8L2P0C7V8 631 aa23.13■■□□□ 1.29
MKNK1-203ENST00000371945 HRCP23327 699 aa23.12■■□□□ 1.29
MKNK1-203ENST00000371945 ABCC9O60706 1549 aa23.01■■□□□ 1.27
MKNK1-203ENST00000371945 MYO15BQ96JP2 1530 aa22.99■■□□□ 1.27
MKNK1-203ENST00000371945 SHROOM4Q9ULL8 1493 aa22.96■■□□□ 1.27
MKNK1-203ENST00000371945 MYT1Q01538 1121 aa22.87■■□□□ 1.25
MKNK1-203ENST00000371945 NACADO15069 1562 aa22.79■■□□□ 1.24
MKNK1-203ENST00000371945 RB1CC1Q8TDY2 1594 aa22.56■■□□□ 1.2
MKNK1-203ENST00000371945 SCRIBQ14160 1630 aa22.5■■□□□ 1.19
MKNK1-203ENST00000371945 PPARGC1BQ86YN6 1023 aaKnown RBP22.18■■□□□ 1.14
MKNK1-203ENST00000371945 SUPT5HO00267 1087 aaKnown RBP22.16■■□□□ 1.14
MKNK1-203ENST00000371945 PCGF6Q9BYE7 350 aa22.12■■□□□ 1.13
MKNK1-203ENST00000371945 UNC13AQ9UPW8 1703 aa22.08■■□□□ 1.13
MKNK1-203ENST00000371945 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
MKNK1-203ENST00000371945 BICRAQ9NZM4 1560 aa21.86■■□□□ 1.09
MKNK1-203ENST00000371945 RSF1Q96T23 1441 aaPredicted RBP21.86■■□□□ 1.09
MKNK1-203ENST00000371945 ZEB1P37275 1124 aaPredicted RBP21.83■■□□□ 1.09
MKNK1-203ENST00000371945 CECR2Q9BXF3 1484 aa21.82■■□□□ 1.08
MKNK1-203ENST00000371945 BAZ1AQ9NRL2 1556 aaPredicted RBP21.72■■□□□ 1.07
MKNK1-203ENST00000371945 MROH2BQ7Z745 1585 aa21.72■■□□□ 1.07
MKNK1-203ENST00000371945 PABPN1Q86U42 306 aaKnown RBP eCLIP21.7■■□□□ 1.06
MKNK1-203ENST00000371945 TTBK1Q5TCY1 1321 aaPredicted RBP21.69■■□□□ 1.06
MKNK1-203ENST00000371945 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
MKNK1-203ENST00000371945 SMARCA4P51532 1647 aa21.6■■□□□ 1.05
MKNK1-203ENST00000371945 TRIM26Q12899 539 aaPredicted RBP21.6■■□□□ 1.05
MKNK1-203ENST00000371945 WIZO95785 1651 aa21.54■■□□□ 1.04
MKNK1-203ENST00000371945 ACIN1Q9UKV3 1341 aaKnown RBP21.45■■□□□ 1.02
MKNK1-203ENST00000371945 TOP2AP11388 1531 aaKnown RBP21.36■■□□□ 1.01
MKNK1-203ENST00000371945 PEG3Q9GZU2 1588 aa21.35■■□□□ 1.01
MKNK1-203ENST00000371945 CENPBP07199 599 aaPredicted RBP21.25■□□□□ 0.99
MKNK1-203ENST00000371945 SMARCA2P51531 1590 aa21.23■□□□□ 0.99
MKNK1-203ENST00000371945 ATAD2BQ9ULI0 1458 aa21.22■□□□□ 0.99
MKNK1-203ENST00000371945 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
MKNK1-203ENST00000371945 NEUROD1Q13562 356 aa21.17■□□□□ 0.98
MKNK1-203ENST00000371945 GTF3C3Q9Y5Q9 886 aa21.14■□□□□ 0.98
MKNK1-203ENST00000371945 CCDC88BA6NC98 1476 aa21.11■□□□□ 0.97
MKNK1-203ENST00000371945 BAZ1BQ9UIG0 1483 aaKnown RBP21.11■□□□□ 0.97
MKNK1-203ENST00000371945 NCAPD3P42695 1498 aa21.03■□□□□ 0.96
MKNK1-203ENST00000371945 HMGXB3Q12766 1538 aa21.02■□□□□ 0.96
MKNK1-203ENST00000371945 LOC105371045A0A1W2PR82 267 aa20.91■□□□□ 0.94
MKNK1-203ENST00000371945 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
MKNK1-203ENST00000371945 CC2D2AQ9P2K1 1620 aa20.84■□□□□ 0.93
MKNK1-203ENST00000371945 DIEXFQ68CQ4 756 aaKnown RBP20.74■□□□□ 0.91
MKNK1-203ENST00000371945 BCL11AQ9H165 835 aa20.74■□□□□ 0.91
MKNK1-203ENST00000371945 DNAJC5BQ9UF47 199 aa20.74■□□□□ 0.91
MKNK1-203ENST00000371945 ABCC8Q09428 1581 aa20.69■□□□□ 0.9
MKNK1-203ENST00000371945 CFTRP13569 1480 aa20.59■□□□□ 0.89
MKNK1-203ENST00000371945 CLSPNQ9HAW4 1339 aa20.58■□□□□ 0.88
MKNK1-203ENST00000371945 WRNQ14191 1432 aaPredicted RBP eCLIP20.58■□□□□ 0.88
MKNK1-203ENST00000371945 ANP32EQ9BTT0 268 aa20.56■□□□□ 0.88
MKNK1-203ENST00000371945 PRDM2Q13029 1718 aa20.5■□□□□ 0.87
MKNK1-203ENST00000371945 CADPSQ9ULU8 1353 aa20.49■□□□□ 0.87
MKNK1-203ENST00000371945 SYNJ1O43426 1573 aa20.47■□□□□ 0.87
MKNK1-203ENST00000371945 FAM9AQ8IZU1 332 aaPredicted RBP20.47■□□□□ 0.87
MKNK1-203ENST00000371945 CCER1Q8TC90 406 aaPredicted RBP20.43■□□□□ 0.86
MKNK1-203ENST00000371945 TOP2BQ02880 1626 aa20.41■□□□□ 0.86
MKNK1-203ENST00000371945 BIVM-ERCC5R4GMW8 1640 aa20.39■□□□□ 0.85
MKNK1-203ENST00000371945 EEA1Q15075 1411 aa20.38■□□□□ 0.85
MKNK1-203ENST00000371945 SOGA1O94964 1423 aa20.33■□□□□ 0.85
MKNK1-203ENST00000371945 ZNF316A6NFI3 1004 aaPredicted RBP20.32■□□□□ 0.84
MKNK1-203ENST00000371945 CUX1P39880 1505 aa20.3■□□□□ 0.84
MKNK1-203ENST00000371945 LAMC3Q9Y6N6 1575 aa20.3■□□□□ 0.84
MKNK1-203ENST00000371945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.29■□□□□ 0.84
MKNK1-203ENST00000371945 PRKCSHP14314 528 aaPredicted RBP20.26■□□□□ 0.83
MKNK1-203ENST00000371945 ERICH6Q7L0X2 663 aa20.26■□□□□ 0.83
MKNK1-203ENST00000371945 FANCD2Q9BXW9 1451 aa20.25■□□□□ 0.83
MKNK1-203ENST00000371945 NESP48681 1621 aa20.23■□□□□ 0.83
MKNK1-203ENST00000371945 RUSC2Q8N2Y8 1516 aa20.23■□□□□ 0.83
MKNK1-203ENST00000371945 CSRNP3Q8WYN3 585 aa20.22■□□□□ 0.83
MKNK1-203ENST00000371945 YTHDC1Q96MU7 727 aaKnown RBP20.18■□□□□ 0.82
MKNK1-203ENST00000371945 TSHZ2Q9NRE2 1034 aa20.13■□□□□ 0.81
MKNK1-203ENST00000371945 PDS5BQ9NTI5 1447 aa20.13■□□□□ 0.81
MKNK1-203ENST00000371945 CEP164Q9UPV0 1460 aa20.12■□□□□ 0.81
MKNK1-203ENST00000371945 DNMBPQ6XZF7 1577 aa20.11■□□□□ 0.81
MKNK1-203ENST00000371945 EHMT2Q96KQ7 1210 aa20.11■□□□□ 0.81
MKNK1-203ENST00000371945 SUPT16HQ9Y5B9 1047 aaKnown RBP20.09■□□□□ 0.81
MKNK1-203ENST00000371945 KIF21BO75037 1637 aa20.09■□□□□ 0.81
MKNK1-203ENST00000371945 GOLGA3Q08378 1498 aa20.08■□□□□ 0.8
MKNK1-203ENST00000371945 FGD5Q6ZNL6 1462 aa20.07■□□□□ 0.8
MKNK1-203ENST00000371945 KIF27Q86VH2 1401 aa20.06■□□□□ 0.8
MKNK1-203ENST00000371945 TOPBP1Q92547 1522 aa20.05■□□□□ 0.8
MKNK1-203ENST00000371945 MIER1Q8N108 512 aa20.05■□□□□ 0.8
MKNK1-203ENST00000371945 TNIKQ9UKE5 1360 aa20.04■□□□□ 0.8
MKNK1-203ENST00000371945 KIF21AQ7Z4S6 1674 aa20.01■□□□□ 0.79
MKNK1-203ENST00000371945 URB2Q14146 1524 aaKnown RBP19.99■□□□□ 0.79
MKNK1-203ENST00000371945 CUX2O14529 1486 aa19.96■□□□□ 0.79
MKNK1-203ENST00000371945 POLA1P09884 1462 aaPredicted RBP19.96■□□□□ 0.79
MKNK1-203ENST00000371945 UBTFP17480 764 aaKnown RBP19.95■□□□□ 0.78
MKNK1-203ENST00000371945 PRXQ9BXM0 1461 aa19.95■□□□□ 0.78
MKNK1-203ENST00000371945 ERICH3Q5RHP9 1530 aa19.94■□□□□ 0.78
MKNK1-203ENST00000371945 RAPGEF2Q9Y4G8 1499 aa19.92■□□□□ 0.78
MKNK1-203ENST00000371945 CEP162Q5TB80 1403 aa19.92■□□□□ 0.78
MKNK1-203ENST00000371945 ABCA10Q8WWZ4 1543 aa19.91■□□□□ 0.78
MKNK1-203ENST00000371945 APLP2Q06481 763 aa19.89■□□□□ 0.77
MKNK1-203ENST00000371945 RAD54L2Q9Y4B4 1467 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms