Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AL451085.2-201ENST00000605085 799 ntBASIC21■□□□□ 0.95
RPS4XP62701 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
RPS4XP62701 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPS4XP62701 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPS4XP62701 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.99■□□□□ 0.95
RPS4XP62701 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPS4XP62701 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
RPS4XP62701 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPS4XP62701 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPS4XP62701 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS4XP62701 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.98■□□□□ 0.95
RPS4XP62701 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.98■□□□□ 0.95
RPS4XP62701 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS4XP62701 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS4XP62701 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS4XP62701 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.98■□□□□ 0.95
RPS4XP62701 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS4XP62701 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS4XP62701 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS4XP62701 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
RPS4XP62701 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPS4XP62701 KRT8P33-201ENST00000508125 1423 ntBASIC20.97■□□□□ 0.95
RPS4XP62701 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPS4XP62701 YBX1P4-201ENST00000392794 808 ntBASIC20.97■□□□□ 0.95
RPS4XP62701 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.97■□□□□ 0.95
RPS4XP62701 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
RPS4XP62701 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPS4XP62701 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
RPS4XP62701 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPS4XP62701 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.96■□□□□ 0.95
RPS4XP62701 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPS4XP62701 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.96■□□□□ 0.95
RPS4XP62701 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.96■□□□□ 0.95
RPS4XP62701 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.96■□□□□ 0.95
RPS4XP62701 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPS4XP62701 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPS4XP62701 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.95■□□□□ 0.94
RPS4XP62701 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.95■□□□□ 0.94
RPS4XP62701 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.95■□□□□ 0.94
RPS4XP62701 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPS4XP62701 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPS4XP62701 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.95■□□□□ 0.94
RPS4XP62701 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.95■□□□□ 0.94
RPS4XP62701 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPS4XP62701 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPS4XP62701 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPS4XP62701 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPS4XP62701 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPS4XP62701 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPS4XP62701 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.94■□□□□ 0.94
RPS4XP62701 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPS4XP62701 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPS4XP62701 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPS4XP62701 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPS4XP62701 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.94■□□□□ 0.94
RPS4XP62701 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS4XP62701 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RPS4XP62701 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.93■□□□□ 0.94
RPS4XP62701 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS4XP62701 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS4XP62701 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RPS4XP62701 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS4XP62701 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.93■□□□□ 0.94
RPS4XP62701 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RPS4XP62701 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS4XP62701 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPS4XP62701 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS4XP62701 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPS4XP62701 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RPS4XP62701 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPS4XP62701 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPS4XP62701 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.92■□□□□ 0.94
RPS4XP62701 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPS4XP62701 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.92■□□□□ 0.94
RPS4XP62701 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.92■□□□□ 0.94
RPS4XP62701 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPS4XP62701 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RPS4XP62701 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RPS4XP62701 AL592295.1-201ENST00000400984 884 ntBASIC20.91■□□□□ 0.94
RPS4XP62701 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.91■□□□□ 0.94
RPS4XP62701 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RPS4XP62701 AC090877.2-201ENST00000558441 1738 ntBASIC20.91■□□□□ 0.94
RPS4XP62701 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPS4XP62701 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.9■□□□□ 0.94
RPS4XP62701 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RPS4XP62701 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPS4XP62701 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPS4XP62701 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.9■□□□□ 0.94
RPS4XP62701 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPS4XP62701 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPS4XP62701 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPS4XP62701 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.89■□□□□ 0.94
RPS4XP62701 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPS4XP62701 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.89■□□□□ 0.93
RPS4XP62701 LONRF2P2-201ENST00000439212 571 ntBASIC20.89■□□□□ 0.93
RPS4XP62701 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.89■□□□□ 0.93
RPS4XP62701 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.89■□□□□ 0.93
RPS4XP62701 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RPS4XP62701 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.89■□□□□ 0.93
RPS4XP62701 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms