RNA–Protein interactions for RNA: ENST00000371041.3

SLIT1-203, Transcript of slit guidance ligand 1, humanhuman

TSL 2 BASIC

Gene SLIT1, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT1-203ENST00000371041 NISCHQ9Y2I1 1504 aa55.05■■■■■ 6.4
SLIT1-203ENST00000371041 CCDC180Q9P1Z9 1646 aa48.52■■■■■ 5.36
SLIT1-203ENST00000371041 ABCC9O60706 1549 aa46.88■■■■■ 5.09
SLIT1-203ENST00000371041 ZCCHC6Q5VYS8 1495 aaKnown RBP46.03■■■■■ 4.96
SLIT1-203ENST00000371041 DCAF8L2P0C7V8 631 aa45.78■■■■■ 4.92
SLIT1-203ENST00000371041 DCAF1Q9Y4B6 1507 aa45.49■■■■■ 4.87
SLIT1-203ENST00000371041 NACADO15069 1562 aa45.38■■■■■ 4.85
SLIT1-203ENST00000371041 MYO15BQ96JP2 1530 aa45.31■■■■■ 4.84
SLIT1-203ENST00000371041 RB1CC1Q8TDY2 1594 aa45.28■■■■■ 4.84
SLIT1-203ENST00000371041 SCRIBQ14160 1630 aa44.53■■■■■ 4.72
SLIT1-203ENST00000371041 UNC13AQ9UPW8 1703 aa44.48■■■■■ 4.71
SLIT1-203ENST00000371041 SHROOM4Q9ULL8 1493 aa44.22■■■■■ 4.67
SLIT1-203ENST00000371041 BICRAQ9NZM4 1560 aa43.99■■■■■ 4.63
SLIT1-203ENST00000371041 PABPN1Q86U42 306 aaKnown RBP eCLIP43.95■■■■■ 4.63
SLIT1-203ENST00000371041 CECR2Q9BXF3 1484 aa42.9■■■■■ 4.46
SLIT1-203ENST00000371041 EIF4G1Q04637 1599 aaKnown RBP42.74■■■■■ 4.43
SLIT1-203ENST00000371041 SMARCA4P51532 1647 aa42.57■■■■■ 4.4
SLIT1-203ENST00000371041 BAZ1AQ9NRL2 1556 aaPredicted RBP42.56■■■■■ 4.4
SLIT1-203ENST00000371041 MROH2BQ7Z745 1585 aa42.51■■■■■ 4.4
SLIT1-203ENST00000371041 CC2D2AQ9P2K1 1620 aa42.4■■■■■ 4.38
SLIT1-203ENST00000371041 RSF1Q96T23 1441 aaPredicted RBP42.36■■■■■ 4.37
SLIT1-203ENST00000371041 DNAJC5BQ9UF47 199 aa42.31■■■■■ 4.36
SLIT1-203ENST00000371041 WIZO95785 1651 aa42.14■■■■■ 4.34
SLIT1-203ENST00000371041 ATAD2BQ9ULI0 1458 aa42.08■■■■■ 4.33
SLIT1-203ENST00000371041 SUPT5HO00267 1087 aaKnown RBP42.07■■■■■ 4.33
SLIT1-203ENST00000371041 PEG3Q9GZU2 1588 aa42.03■■■■■ 4.32
SLIT1-203ENST00000371041 SMARCA2P51531 1590 aa42.03■■■■■ 4.32
SLIT1-203ENST00000371041 NCAPD3P42695 1498 aa41.89■■■■■ 4.3
SLIT1-203ENST00000371041 BAZ1BQ9UIG0 1483 aaKnown RBP41.81■■■■■ 4.28
SLIT1-203ENST00000371041 HMGXB3Q12766 1538 aa41.77■■■■■ 4.28
SLIT1-203ENST00000371041 TOP2AP11388 1531 aaKnown RBP41.61■■■■■ 4.25
SLIT1-203ENST00000371041 CCDC88BA6NC98 1476 aa41.21■■■■■ 4.19
SLIT1-203ENST00000371041 NESP48681 1621 aa40.83■■■■■ 4.13
SLIT1-203ENST00000371041 CADPSQ9ULU8 1353 aa40.74■■■■■ 4.11
SLIT1-203ENST00000371041 CFTRP13569 1480 aa40.68■■■■■ 4.1
SLIT1-203ENST00000371041 LAMC3Q9Y6N6 1575 aa40.67■■■■■ 4.1
SLIT1-203ENST00000371041 PRDM2Q13029 1718 aa40.5■■■■■ 4.07
SLIT1-203ENST00000371041 KIF21AQ7Z4S6 1674 aa40.39■■■■■ 4.06
SLIT1-203ENST00000371041 PDS5BQ9NTI5 1447 aa40.33■■■■■ 4.05
SLIT1-203ENST00000371041 FANCD2Q9BXW9 1451 aa40.31■■■■■ 4.04
SLIT1-203ENST00000371041 ERCC6Q03468 1493 aa40.28■■■■■ 4.04
SLIT1-203ENST00000371041 CEP164Q9UPV0 1460 aa40.18■■■■■ 4.02
SLIT1-203ENST00000371041 ABCC8Q09428 1581 aa40.02■■■■■ 4
SLIT1-203ENST00000371041 THOC2Q8NI27 1593 aaKnown RBP39.97■■■■□ 3.99
SLIT1-203ENST00000371041 MRC2Q9UBG0 1479 aa39.94■■■■□ 3.98
SLIT1-203ENST00000371041 URB2Q14146 1524 aaKnown RBP39.91■■■■□ 3.98
SLIT1-203ENST00000371041 WRNQ14191 1432 aaPredicted RBP eCLIP39.85■■■■□ 3.97
SLIT1-203ENST00000371041 CUX1P39880 1505 aa39.82■■■■□ 3.97
SLIT1-203ENST00000371041 CHIC1Q5VXU3 224 aa39.81■■■■□ 3.96
SLIT1-203ENST00000371041 WDR62O43379 1518 aa39.79■■■■□ 3.96
SLIT1-203ENST00000371041 TOPBP1Q92547 1522 aa39.78■■■■□ 3.96
SLIT1-203ENST00000371041 DNMBPQ6XZF7 1577 aa39.77■■■■□ 3.96
SLIT1-203ENST00000371041 SYNJ1O43426 1573 aa39.76■■■■□ 3.96
SLIT1-203ENST00000371041 TOP2BQ02880 1626 aa39.63■■■■□ 3.93
SLIT1-203ENST00000371041 BIVM-ERCC5R4GMW8 1640 aa39.63■■■■□ 3.93
SLIT1-203ENST00000371041 TRIM41Q8WV44 630 aa39.61■■■■□ 3.93
SLIT1-203ENST00000371041 FGD5Q6ZNL6 1462 aa39.54■■■■□ 3.92
SLIT1-203ENST00000371041 POLA1P09884 1462 aaPredicted RBP39.5■■■■□ 3.91
SLIT1-203ENST00000371041 CUX2O14529 1486 aa39.43■■■■□ 3.9
SLIT1-203ENST00000371041 RAD54L2Q9Y4B4 1467 aa39.38■■■■□ 3.89
SLIT1-203ENST00000371041 SOGA1O94964 1423 aa39.32■■■■□ 3.89
SLIT1-203ENST00000371041 TARBP1Q13395 1621 aaKnown RBP39.3■■■■□ 3.88
SLIT1-203ENST00000371041 IFT140Q96RY7 1462 aa39.24■■■■□ 3.87
SLIT1-203ENST00000371041 WDR97A6NE52 1622 aa39.2■■■■□ 3.87
SLIT1-203ENST00000371041 ZNF608Q9ULD9 1512 aaPredicted RBP39.16■■■■□ 3.86
SLIT1-203ENST00000371041 ABCA10Q8WWZ4 1543 aa39.13■■■■□ 3.85
SLIT1-203ENST00000371041 TDRD9Q8NDG6 1382 aaKnown RBP39.06■■■■□ 3.84
SLIT1-203ENST00000371041 EIF4G3O43432 1585 aaKnown RBP39.04■■■■□ 3.84
SLIT1-203ENST00000371041 RUSC2Q8N2Y8 1516 aa39.02■■■■□ 3.84
SLIT1-203ENST00000371041 AQRO60306 1485 aaKnown RBP eCLIP39.02■■■■□ 3.84
SLIT1-203ENST00000371041 ABCA5Q8WWZ7 1642 aa38.96■■■■□ 3.83
SLIT1-203ENST00000371041 KIF27Q86VH2 1401 aa38.92■■■■□ 3.82
SLIT1-203ENST00000371041 FAM9AQ8IZU1 332 aaPredicted RBP38.88■■■■□ 3.81
SLIT1-203ENST00000371041 GAPVD1Q14C86 1478 aa38.88■■■■□ 3.81
SLIT1-203ENST00000371041 PBRM1Q86U86 1689 aa38.85■■■■□ 3.81
SLIT1-203ENST00000371041 IGF1RP08069 1367 aa38.76■■■■□ 3.8
SLIT1-203ENST00000371041 GRIN2BQ13224 1484 aa38.72■■■■□ 3.79
SLIT1-203ENST00000371041 EEA1Q15075 1411 aa38.71■■■■□ 3.79
SLIT1-203ENST00000371041 CSRNP3Q8WYN3 585 aa38.69■■■■□ 3.78
SLIT1-203ENST00000371041 SNAPC4Q5SXM2 1469 aa38.66■■■■□ 3.78
SLIT1-203ENST00000371041 ERICH3Q5RHP9 1530 aa38.64■■■■□ 3.78
SLIT1-203ENST00000371041 ADAMTS12P58397 1594 aa38.54■■■■□ 3.76
SLIT1-203ENST00000371041 MAGI1Q96QZ7 1491 aaPredicted RBP38.52■■■■□ 3.76
SLIT1-203ENST00000371041 CARMIL1Q5VZK9 1371 aa38.5■■■■□ 3.75
SLIT1-203ENST00000371041 CUL7Q14999 1698 aa38.48■■■■□ 3.75
SLIT1-203ENST00000371041 PRXQ9BXM0 1461 aa38.46■■■■□ 3.75
SLIT1-203ENST00000371041 CHD1O14646 1710 aa38.43■■■■□ 3.74
SLIT1-203ENST00000371041 FHAD1B1AJZ9 1412 aa38.42■■■■□ 3.74
SLIT1-203ENST00000371041 FBLN2P98095 1184 aa38.4■■■■□ 3.74
SLIT1-203ENST00000371041 SYNJ2O15056 1496 aa38.39■■■■□ 3.74
SLIT1-203ENST00000371041 EHMT2Q96KQ7 1210 aa38.36■■■■□ 3.73
SLIT1-203ENST00000371041 RAPGEF2Q9Y4G8 1499 aa38.32■■■■□ 3.73
SLIT1-203ENST00000371041 CHMP7Q8WUX9 453 aaPredicted RBP38.32■■■■□ 3.72
SLIT1-203ENST00000371041 GRIN2AQ12879 1464 aa38.28■■■■□ 3.72
SLIT1-203ENST00000371041 LOC105371045A0A1W2PR82 267 aa38.27■■■■□ 3.72
SLIT1-203ENST00000371041 KIF21BO75037 1637 aa38.27■■■■□ 3.72
SLIT1-203ENST00000371041 GOLGA3Q08378 1498 aa38.15■■■■□ 3.7
SLIT1-203ENST00000371041 CEP170Q5SW79 1584 aa38.12■■■■□ 3.69
SLIT1-203ENST00000371041 UBTFP17480 764 aaKnown RBP38.07■■■■□ 3.68
SLIT1-203ENST00000371041 NUP160Q12769 1436 aa38.03■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms