RNA–Protein interactions for RNA: ENST00000558441.1

AC090877.2-201, humanhuman

BASIC

Gene AC090877.2, Length 1,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090877.2-201ENST00000558441 NISCHQ9Y2I1 1504 aa55.26■■■■■ 6.44
AC090877.2-201ENST00000558441 CCDC180Q9P1Z9 1646 aa48.71■■■■■ 5.39
AC090877.2-201ENST00000558441 ABCC9O60706 1549 aa46.96■■■■■ 5.11
AC090877.2-201ENST00000558441 ZCCHC6Q5VYS8 1495 aaKnown RBP46.2■■■■■ 4.99
AC090877.2-201ENST00000558441 DCAF8L2P0C7V8 631 aa45.95■■■■■ 4.95
AC090877.2-201ENST00000558441 DCAF1Q9Y4B6 1507 aa45.75■■■■■ 4.91
AC090877.2-201ENST00000558441 NACADO15069 1562 aa45.65■■■■■ 4.9
AC090877.2-201ENST00000558441 MYO15BQ96JP2 1530 aa45.64■■■■■ 4.9
AC090877.2-201ENST00000558441 RB1CC1Q8TDY2 1594 aa45.5■■■■■ 4.87
AC090877.2-201ENST00000558441 SCRIBQ14160 1630 aa44.56■■■■■ 4.72
AC090877.2-201ENST00000558441 UNC13AQ9UPW8 1703 aa44.4■■■■■ 4.7
AC090877.2-201ENST00000558441 SHROOM4Q9ULL8 1493 aa44.21■■■■■ 4.67
AC090877.2-201ENST00000558441 BICRAQ9NZM4 1560 aa44.07■■■■■ 4.65
AC090877.2-201ENST00000558441 PABPN1Q86U42 306 aaKnown RBP eCLIP44.07■■■■■ 4.64
AC090877.2-201ENST00000558441 CECR2Q9BXF3 1484 aa42.97■■■■■ 4.47
AC090877.2-201ENST00000558441 EIF4G1Q04637 1599 aaKnown RBP42.87■■■■■ 4.45
AC090877.2-201ENST00000558441 BAZ1AQ9NRL2 1556 aaPredicted RBP42.78■■■■■ 4.44
AC090877.2-201ENST00000558441 SMARCA4P51532 1647 aa42.68■■■■■ 4.42
AC090877.2-201ENST00000558441 MROH2BQ7Z745 1585 aa42.61■■■■■ 4.41
AC090877.2-201ENST00000558441 CC2D2AQ9P2K1 1620 aa42.48■■■■■ 4.39
AC090877.2-201ENST00000558441 RSF1Q96T23 1441 aaPredicted RBP42.44■■■■■ 4.39
AC090877.2-201ENST00000558441 DNAJC5BQ9UF47 199 aa42.38■■■■■ 4.38
AC090877.2-201ENST00000558441 ATAD2BQ9ULI0 1458 aa42.28■■■■■ 4.36
AC090877.2-201ENST00000558441 SMARCA2P51531 1590 aa42.26■■■■■ 4.35
AC090877.2-201ENST00000558441 PEG3Q9GZU2 1588 aa42.26■■■■■ 4.35
AC090877.2-201ENST00000558441 WIZO95785 1651 aa42.17■■■■■ 4.34
AC090877.2-201ENST00000558441 NCAPD3P42695 1498 aa42.14■■■■■ 4.34
AC090877.2-201ENST00000558441 SUPT5HO00267 1087 aaKnown RBP42.05■■■■■ 4.32
AC090877.2-201ENST00000558441 BAZ1BQ9UIG0 1483 aaKnown RBP41.98■■■■■ 4.31
AC090877.2-201ENST00000558441 HMGXB3Q12766 1538 aa41.97■■■■■ 4.31
AC090877.2-201ENST00000558441 TOP2AP11388 1531 aaKnown RBP41.78■■■■■ 4.28
AC090877.2-201ENST00000558441 CCDC88BA6NC98 1476 aa41.32■■■■■ 4.2
AC090877.2-201ENST00000558441 CADPSQ9ULU8 1353 aa40.98■■■■■ 4.15
AC090877.2-201ENST00000558441 CFTRP13569 1480 aa40.88■■■■■ 4.14
AC090877.2-201ENST00000558441 NESP48681 1621 aa40.87■■■■■ 4.13
AC090877.2-201ENST00000558441 LAMC3Q9Y6N6 1575 aa40.87■■■■■ 4.13
AC090877.2-201ENST00000558441 PDS5BQ9NTI5 1447 aa40.62■■■■■ 4.09
AC090877.2-201ENST00000558441 PRDM2Q13029 1718 aa40.54■■■■■ 4.08
AC090877.2-201ENST00000558441 FANCD2Q9BXW9 1451 aa40.49■■■■■ 4.07
AC090877.2-201ENST00000558441 ERCC6Q03468 1493 aa40.42■■■■■ 4.06
AC090877.2-201ENST00000558441 CEP164Q9UPV0 1460 aa40.35■■■■■ 4.05
AC090877.2-201ENST00000558441 KIF21AQ7Z4S6 1674 aa40.35■■■■■ 4.05
AC090877.2-201ENST00000558441 MRC2Q9UBG0 1479 aa40.12■■■■■ 4.01
AC090877.2-201ENST00000558441 ABCC8Q09428 1581 aa40.04■■■■■ 4
AC090877.2-201ENST00000558441 THOC2Q8NI27 1593 aaKnown RBP40.02■■■■■ 4
AC090877.2-201ENST00000558441 URB2Q14146 1524 aaKnown RBP40.01■■■■■ 4
AC090877.2-201ENST00000558441 WRNQ14191 1432 aaPredicted RBP eCLIP40■■■■□ 3.99
AC090877.2-201ENST00000558441 WDR62O43379 1518 aa39.94■■■■□ 3.98
AC090877.2-201ENST00000558441 DNMBPQ6XZF7 1577 aa39.93■■■■□ 3.98
AC090877.2-201ENST00000558441 CUX1P39880 1505 aa39.92■■■■□ 3.98
AC090877.2-201ENST00000558441 TOPBP1Q92547 1522 aa39.92■■■■□ 3.98
AC090877.2-201ENST00000558441 SYNJ1O43426 1573 aa39.81■■■■□ 3.96
AC090877.2-201ENST00000558441 TOP2BQ02880 1626 aa39.79■■■■□ 3.96
AC090877.2-201ENST00000558441 BIVM-ERCC5R4GMW8 1640 aa39.75■■■■□ 3.95
AC090877.2-201ENST00000558441 CHIC1Q5VXU3 224 aa39.71■■■■□ 3.95
AC090877.2-201ENST00000558441 TRIM41Q8WV44 630 aa39.68■■■■□ 3.94
AC090877.2-201ENST00000558441 CUX2O14529 1486 aa39.67■■■■□ 3.94
AC090877.2-201ENST00000558441 FGD5Q6ZNL6 1462 aa39.67■■■■□ 3.94
AC090877.2-201ENST00000558441 POLA1P09884 1462 aaPredicted RBP39.64■■■■□ 3.94
AC090877.2-201ENST00000558441 SOGA1O94964 1423 aa39.53■■■■□ 3.92
AC090877.2-201ENST00000558441 IFT140Q96RY7 1462 aa39.48■■■■□ 3.91
AC090877.2-201ENST00000558441 RAD54L2Q9Y4B4 1467 aa39.47■■■■□ 3.91
AC090877.2-201ENST00000558441 TARBP1Q13395 1621 aaKnown RBP39.39■■■■□ 3.9
AC090877.2-201ENST00000558441 ABCA10Q8WWZ4 1543 aa39.32■■■■□ 3.89
AC090877.2-201ENST00000558441 WDR97A6NE52 1622 aa39.23■■■■□ 3.87
AC090877.2-201ENST00000558441 ZNF608Q9ULD9 1512 aaPredicted RBP39.22■■■■□ 3.87
AC090877.2-201ENST00000558441 TDRD9Q8NDG6 1382 aaKnown RBP39.21■■■■□ 3.87
AC090877.2-201ENST00000558441 AQRO60306 1485 aaKnown RBP eCLIP39.13■■■■□ 3.86
AC090877.2-201ENST00000558441 KIF27Q86VH2 1401 aa39.11■■■■□ 3.85
AC090877.2-201ENST00000558441 EIF4G3O43432 1585 aaKnown RBP39.07■■■■□ 3.85
AC090877.2-201ENST00000558441 GAPVD1Q14C86 1478 aa39.07■■■■□ 3.84
AC090877.2-201ENST00000558441 ABCA5Q8WWZ7 1642 aa39.05■■■■□ 3.84
AC090877.2-201ENST00000558441 RUSC2Q8N2Y8 1516 aa38.99■■■■□ 3.83
AC090877.2-201ENST00000558441 GRIN2BQ13224 1484 aa38.95■■■■□ 3.83
AC090877.2-201ENST00000558441 EEA1Q15075 1411 aa38.91■■■■□ 3.82
AC090877.2-201ENST00000558441 ERICH3Q5RHP9 1530 aa38.86■■■■□ 3.81
AC090877.2-201ENST00000558441 PBRM1Q86U86 1689 aa38.85■■■■□ 3.81
AC090877.2-201ENST00000558441 IGF1RP08069 1367 aa38.85■■■■□ 3.81
AC090877.2-201ENST00000558441 FAM9AQ8IZU1 332 aaPredicted RBP38.84■■■■□ 3.81
AC090877.2-201ENST00000558441 SNAPC4Q5SXM2 1469 aa38.78■■■■□ 3.8
AC090877.2-201ENST00000558441 CSRNP3Q8WYN3 585 aa38.77■■■■□ 3.8
AC090877.2-201ENST00000558441 MAGI1Q96QZ7 1491 aaPredicted RBP38.74■■■■□ 3.79
AC090877.2-201ENST00000558441 CARMIL1Q5VZK9 1371 aa38.65■■■■□ 3.78
AC090877.2-201ENST00000558441 FHAD1B1AJZ9 1412 aa38.65■■■■□ 3.78
AC090877.2-201ENST00000558441 CUL7Q14999 1698 aa38.64■■■■□ 3.78
AC090877.2-201ENST00000558441 ADAMTS12P58397 1594 aa38.63■■■■□ 3.77
AC090877.2-201ENST00000558441 SYNJ2O15056 1496 aa38.6■■■■□ 3.77
AC090877.2-201ENST00000558441 CHMP7Q8WUX9 453 aaPredicted RBP38.57■■■■□ 3.76
AC090877.2-201ENST00000558441 FBLN2P98095 1184 aa38.55■■■■□ 3.76
AC090877.2-201ENST00000558441 PRXQ9BXM0 1461 aa38.55■■■■□ 3.76
AC090877.2-201ENST00000558441 RAPGEF2Q9Y4G8 1499 aa38.49■■■■□ 3.75
AC090877.2-201ENST00000558441 GRIN2AQ12879 1464 aa38.44■■■■□ 3.74
AC090877.2-201ENST00000558441 CHD1O14646 1710 aa38.39■■■■□ 3.74
AC090877.2-201ENST00000558441 KIF21BO75037 1637 aa38.39■■■■□ 3.74
AC090877.2-201ENST00000558441 EHMT2Q96KQ7 1210 aa38.27■■■■□ 3.72
AC090877.2-201ENST00000558441 GOLGA3Q08378 1498 aa38.27■■■■□ 3.72
AC090877.2-201ENST00000558441 OSCARQ8IYS5 282 aa38.25■■■■□ 3.71
AC090877.2-201ENST00000558441 NUP160Q12769 1436 aa38.23■■■■□ 3.71
AC090877.2-201ENST00000558441 CEP170Q5SW79 1584 aa38.19■■■■□ 3.7
AC090877.2-201ENST00000558441 UBTFP17480 764 aaKnown RBP38.16■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms