RNA–Protein interactions for RNA: ENST00000348956.6

CKB-201, Transcript of creatine kinase B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKB-201ENST00000348956 NISCHQ9Y2I1 1504 aa54.71■■■■■ 6.35
CKB-201ENST00000348956 CCDC180Q9P1Z9 1646 aa48.2■■■■■ 5.31
CKB-201ENST00000348956 ABCC9O60706 1549 aa46.71■■■■■ 5.07
CKB-201ENST00000348956 ZCCHC6Q5VYS8 1495 aaKnown RBP45.71■■■■■ 4.91
CKB-201ENST00000348956 DCAF8L2P0C7V8 631 aa45.68■■■■■ 4.9
CKB-201ENST00000348956 NACADO15069 1562 aa45.2■■■■■ 4.83
CKB-201ENST00000348956 DCAF1Q9Y4B6 1507 aa45.2■■■■■ 4.83
CKB-201ENST00000348956 RB1CC1Q8TDY2 1594 aa45.1■■■■■ 4.81
CKB-201ENST00000348956 MYO15BQ96JP2 1530 aa45.1■■■■■ 4.81
CKB-201ENST00000348956 SCRIBQ14160 1630 aa44.22■■■■■ 4.67
CKB-201ENST00000348956 UNC13AQ9UPW8 1703 aa44.06■■■■■ 4.64
CKB-201ENST00000348956 SHROOM4Q9ULL8 1493 aa43.89■■■■■ 4.62
CKB-201ENST00000348956 PABPN1Q86U42 306 aaKnown RBP eCLIP43.85■■■■■ 4.613e-6■■□□□ 13.3
CKB-201ENST00000348956 BICRAQ9NZM4 1560 aa43.73■■■■■ 4.59
CKB-201ENST00000348956 CECR2Q9BXF3 1484 aa42.63■■■■■ 4.41
CKB-201ENST00000348956 EIF4G1Q04637 1599 aaKnown RBP42.54■■■■■ 4.4
CKB-201ENST00000348956 BAZ1AQ9NRL2 1556 aaPredicted RBP42.34■■■■■ 4.37
CKB-201ENST00000348956 SMARCA4P51532 1647 aa42.29■■■■■ 4.36
CKB-201ENST00000348956 DNAJC5BQ9UF47 199 aa42.25■■■■■ 4.35
CKB-201ENST00000348956 MROH2BQ7Z745 1585 aa42.23■■■■■ 4.35
CKB-201ENST00000348956 CC2D2AQ9P2K1 1620 aa42.2■■■■■ 4.35
CKB-201ENST00000348956 RSF1Q96T23 1441 aaPredicted RBP42.01■■■■■ 4.32
CKB-201ENST00000348956 ATAD2BQ9ULI0 1458 aa41.91■■■■■ 4.3
CKB-201ENST00000348956 SMARCA2P51531 1590 aa41.84■■■■■ 4.29
CKB-201ENST00000348956 WIZO95785 1651 aa41.8■■■■■ 4.28
CKB-201ENST00000348956 PEG3Q9GZU2 1588 aa41.79■■■■■ 4.28
CKB-201ENST00000348956 NCAPD3P42695 1498 aa41.73■■■■■ 4.27
CKB-201ENST00000348956 SUPT5HO00267 1087 aaKnown RBP41.67■■■■■ 4.26
CKB-201ENST00000348956 BAZ1BQ9UIG0 1483 aaKnown RBP41.62■■■■■ 4.25
CKB-201ENST00000348956 HMGXB3Q12766 1538 aa41.56■■■■■ 4.24
CKB-201ENST00000348956 TOP2AP11388 1531 aaKnown RBP41.35■■■■■ 4.21
CKB-201ENST00000348956 CCDC88BA6NC98 1476 aa40.93■■■■■ 4.14
CKB-201ENST00000348956 NESP48681 1621 aa40.62■■■■■ 4.09
CKB-201ENST00000348956 CADPSQ9ULU8 1353 aa40.61■■■■■ 4.09
CKB-201ENST00000348956 LAMC3Q9Y6N6 1575 aa40.5■■■■■ 4.07
CKB-201ENST00000348956 CFTRP13569 1480 aa40.49■■■■■ 4.07
CKB-201ENST00000348956 PDS5BQ9NTI5 1447 aa40.26■■■■■ 4.03
CKB-201ENST00000348956 ERCC6Q03468 1493 aa40.18■■■■■ 4.02
CKB-201ENST00000348956 FANCD2Q9BXW9 1451 aa40.16■■■■■ 4.02
CKB-201ENST00000348956 PRDM2Q13029 1718 aa40.12■■■■■ 4.01
CKB-201ENST00000348956 KIF21AQ7Z4S6 1674 aa40.08■■■■■ 4.01
CKB-201ENST00000348956 CEP164Q9UPV0 1460 aa40.02■■■■■ 4
CKB-201ENST00000348956 MRC2Q9UBG0 1479 aa39.8■■■■□ 3.96
CKB-201ENST00000348956 THOC2Q8NI27 1593 aaKnown RBP39.74■■■■□ 3.95
CKB-201ENST00000348956 URB2Q14146 1524 aaKnown RBP39.7■■■■□ 3.95
CKB-201ENST00000348956 ABCC8Q09428 1581 aa39.69■■■■□ 3.94
CKB-201ENST00000348956 WDR62O43379 1518 aa39.61■■■■□ 3.93
CKB-201ENST00000348956 WRNQ14191 1432 aaPredicted RBP eCLIP39.59■■■■□ 3.937e-7■■■■■ 52.5
CKB-201ENST00000348956 TOPBP1Q92547 1522 aa39.58■■■■□ 3.93
CKB-201ENST00000348956 DNMBPQ6XZF7 1577 aa39.56■■■■□ 3.92
CKB-201ENST00000348956 CUX1P39880 1505 aa39.56■■■■□ 3.92
CKB-201ENST00000348956 CHIC1Q5VXU3 224 aa39.49■■■■□ 3.91
CKB-201ENST00000348956 SYNJ1O43426 1573 aa39.44■■■■□ 3.9
CKB-201ENST00000348956 CUX2O14529 1486 aa39.38■■■■□ 3.89
CKB-201ENST00000348956 TOP2BQ02880 1626 aa39.36■■■■□ 3.89
CKB-201ENST00000348956 FGD5Q6ZNL6 1462 aa39.32■■■■□ 3.89
CKB-201ENST00000348956 BIVM-ERCC5R4GMW8 1640 aa39.32■■■■□ 3.88
CKB-201ENST00000348956 POLA1P09884 1462 aaPredicted RBP39.31■■■■□ 3.88
CKB-201ENST00000348956 TRIM41Q8WV44 630 aa39.26■■■■□ 3.87
CKB-201ENST00000348956 RAD54L2Q9Y4B4 1467 aa39.18■■■■□ 3.86
CKB-201ENST00000348956 SOGA1O94964 1423 aa39.18■■■■□ 3.86
CKB-201ENST00000348956 IFT140Q96RY7 1462 aa39.13■■■■□ 3.86
CKB-201ENST00000348956 TARBP1Q13395 1621 aaKnown RBP39.05■■■■□ 3.84
CKB-201ENST00000348956 ZNF608Q9ULD9 1512 aaPredicted RBP38.96■■■■□ 3.83
CKB-201ENST00000348956 ABCA10Q8WWZ4 1543 aa38.93■■■■□ 3.82
CKB-201ENST00000348956 TDRD9Q8NDG6 1382 aaKnown RBP38.93■■■■□ 3.82
CKB-201ENST00000348956 WDR97A6NE52 1622 aa38.86■■■■□ 3.81
CKB-201ENST00000348956 AQRO60306 1485 aaKnown RBP eCLIP38.86■■■■□ 3.818e-8■■■■□ 22.3
CKB-201ENST00000348956 EIF4G3O43432 1585 aaKnown RBP38.78■■■■□ 3.8
CKB-201ENST00000348956 GAPVD1Q14C86 1478 aa38.72■■■■□ 3.79
CKB-201ENST00000348956 KIF27Q86VH2 1401 aa38.7■■■■□ 3.79
CKB-201ENST00000348956 ABCA5Q8WWZ7 1642 aa38.69■■■■□ 3.78
CKB-201ENST00000348956 RUSC2Q8N2Y8 1516 aa38.65■■■■□ 3.78
CKB-201ENST00000348956 GRIN2BQ13224 1484 aa38.6■■■■□ 3.77
CKB-201ENST00000348956 FAM9AQ8IZU1 332 aaPredicted RBP38.53■■■■□ 3.76
CKB-201ENST00000348956 PBRM1Q86U86 1689 aa38.52■■■■□ 3.76
CKB-201ENST00000348956 SNAPC4Q5SXM2 1469 aa38.48■■■■□ 3.75
CKB-201ENST00000348956 IGF1RP08069 1367 aa38.47■■■■□ 3.75
CKB-201ENST00000348956 ERICH3Q5RHP9 1530 aa38.46■■■■□ 3.75
CKB-201ENST00000348956 MAGI1Q96QZ7 1491 aaPredicted RBP38.39■■■■□ 3.74
CKB-201ENST00000348956 EEA1Q15075 1411 aa38.38■■■■□ 3.73
CKB-201ENST00000348956 FBLN2P98095 1184 aa38.35■■■■□ 3.73
CKB-201ENST00000348956 CSRNP3Q8WYN3 585 aa38.34■■■■□ 3.73
CKB-201ENST00000348956 ADAMTS12P58397 1594 aa38.29■■■■□ 3.72
CKB-201ENST00000348956 FHAD1B1AJZ9 1412 aa38.28■■■■□ 3.72
CKB-201ENST00000348956 CHMP7Q8WUX9 453 aaPredicted RBP38.28■■■■□ 3.72
CKB-201ENST00000348956 CARMIL1Q5VZK9 1371 aa38.26■■■■□ 3.72
CKB-201ENST00000348956 SYNJ2O15056 1496 aa38.25■■■■□ 3.71
CKB-201ENST00000348956 CUL7Q14999 1698 aa38.23■■■■□ 3.71
CKB-201ENST00000348956 CHD1O14646 1710 aa38.13■■■■□ 3.69
CKB-201ENST00000348956 PRXQ9BXM0 1461 aa38.12■■■■□ 3.69
CKB-201ENST00000348956 GRIN2AQ12879 1464 aa38.1■■■■□ 3.69
CKB-201ENST00000348956 RAPGEF2Q9Y4G8 1499 aa38.09■■■■□ 3.69
CKB-201ENST00000348956 EHMT2Q96KQ7 1210 aa38.06■■■■□ 3.68
CKB-201ENST00000348956 OSCARQ8IYS5 282 aa37.99■■■■□ 3.67
CKB-201ENST00000348956 LOC105371045A0A1W2PR82 267 aa37.98■■■■□ 3.67
CKB-201ENST00000348956 KIF21BO75037 1637 aa37.92■■■■□ 3.66
CKB-201ENST00000348956 CEP170Q5SW79 1584 aa37.89■■■■□ 3.66
CKB-201ENST00000348956 NUP160Q12769 1436 aa37.87■■■■□ 3.65
CKB-201ENST00000348956 GOLGA3Q08378 1498 aa37.82■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms