RNA–Protein interactions for RNA: ENST00000599689.1

SHD-204, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 5 BASIC

Gene SHD, Length 1,729 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-204ENST00000599689 NISCHQ9Y2I1 1504 aa52.21■■■■■ 5.95
SHD-204ENST00000599689 CCDC180Q9P1Z9 1646 aa46.47■■■■■ 5.03
SHD-204ENST00000599689 ABCC9O60706 1549 aa45.8■■■■■ 4.92
SHD-204ENST00000599689 RB1CC1Q8TDY2 1594 aa43.92■■■■■ 4.62
SHD-204ENST00000599689 NACADO15069 1562 aa43.82■■■■■ 4.61
SHD-204ENST00000599689 DCAF8L2P0C7V8 631 aa43.78■■■■■ 4.6
SHD-204ENST00000599689 MYO15BQ96JP2 1530 aa43.5■■■■■ 4.55
SHD-204ENST00000599689 ZCCHC6Q5VYS8 1495 aaKnown RBP43.43■■■■■ 4.54
SHD-204ENST00000599689 DCAF1Q9Y4B6 1507 aa43.2■■■■■ 4.51
SHD-204ENST00000599689 PABPN1Q86U42 306 aaKnown RBP eCLIP42.79■■■■■ 4.44
SHD-204ENST00000599689 UNC13AQ9UPW8 1703 aa42.79■■■■■ 4.44
SHD-204ENST00000599689 BICRAQ9NZM4 1560 aa42.58■■■■■ 4.41
SHD-204ENST00000599689 SCRIBQ14160 1630 aa42.39■■■■■ 4.38
SHD-204ENST00000599689 DNAJC5BQ9UF47 199 aa42.32■■■■■ 4.37
SHD-204ENST00000599689 SHROOM4Q9ULL8 1493 aa42.17■■■■■ 4.34
SHD-204ENST00000599689 EIF4G1Q04637 1599 aaKnown RBP41.5■■■■■ 4.23
SHD-204ENST00000599689 CC2D2AQ9P2K1 1620 aa41.38■■■■■ 4.22
SHD-204ENST00000599689 CECR2Q9BXF3 1484 aa41.2■■■■■ 4.19
SHD-204ENST00000599689 SUPT5HO00267 1087 aaKnown RBP40.73■■■■■ 4.11
SHD-204ENST00000599689 SMARCA4P51532 1647 aa40.53■■■■■ 4.08
SHD-204ENST00000599689 BAZ1AQ9NRL2 1556 aaPredicted RBP40.48■■■■■ 4.07
SHD-204ENST00000599689 NCAPD3P42695 1498 aa40.48■■■■■ 4.07
SHD-204ENST00000599689 ATAD2BQ9ULI0 1458 aa40.44■■■■■ 4.06
SHD-204ENST00000599689 SMARCA2P51531 1590 aa40.36■■■■■ 4.05
SHD-204ENST00000599689 MROH2BQ7Z745 1585 aa40.22■■■■■ 4.03
SHD-204ENST00000599689 HMGXB3Q12766 1538 aa40.21■■■■■ 4.03
SHD-204ENST00000599689 PEG3Q9GZU2 1588 aa40.17■■■■■ 4.02
SHD-204ENST00000599689 BAZ1BQ9UIG0 1483 aaKnown RBP40.09■■■■■ 4.01
SHD-204ENST00000599689 RSF1Q96T23 1441 aaPredicted RBP40.01■■■■■ 4
SHD-204ENST00000599689 WIZO95785 1651 aa39.73■■■■□ 3.95
SHD-204ENST00000599689 NESP48681 1621 aa39.54■■■■□ 3.92
SHD-204ENST00000599689 ERCC6Q03468 1493 aa39.52■■■■□ 3.92
SHD-204ENST00000599689 LAMC3Q9Y6N6 1575 aa39.4■■■■□ 3.9
SHD-204ENST00000599689 TOP2AP11388 1531 aaKnown RBP39.33■■■■□ 3.89
SHD-204ENST00000599689 CADPSQ9ULU8 1353 aa39.29■■■■□ 3.88
SHD-204ENST00000599689 CUX2O14529 1486 aa39.2■■■■□ 3.87
SHD-204ENST00000599689 PDS5BQ9NTI5 1447 aa39.2■■■■□ 3.87
SHD-204ENST00000599689 CHIC1Q5VXU3 224 aa39.17■■■■□ 3.86
SHD-204ENST00000599689 CFTRP13569 1480 aa38.99■■■■□ 3.83
SHD-204ENST00000599689 KIF21AQ7Z4S6 1674 aa38.98■■■■□ 3.83
SHD-204ENST00000599689 THOC2Q8NI27 1593 aaKnown RBP38.96■■■■□ 3.83
SHD-204ENST00000599689 CCDC88BA6NC98 1476 aa38.9■■■■□ 3.82
SHD-204ENST00000599689 FANCD2Q9BXW9 1451 aa38.81■■■■□ 3.8
SHD-204ENST00000599689 MRC2Q9UBG0 1479 aa38.79■■■■□ 3.8
SHD-204ENST00000599689 CEP164Q9UPV0 1460 aa38.78■■■■□ 3.8
SHD-204ENST00000599689 WDR62O43379 1518 aa38.65■■■■□ 3.78
SHD-204ENST00000599689 PRDM2Q13029 1718 aa38.5■■■■□ 3.75
SHD-204ENST00000599689 URB2Q14146 1524 aaKnown RBP38.42■■■■□ 3.74
SHD-204ENST00000599689 DNAJC5Q9H3Z4 198 aa38.36■■■■□ 3.73
SHD-204ENST00000599689 TRIM41Q8WV44 630 aa38.28■■■■□ 3.72
SHD-204ENST00000599689 ABCC8Q09428 1581 aa38.16■■■■□ 3.7
SHD-204ENST00000599689 TOPBP1Q92547 1522 aa38.15■■■■□ 3.7
SHD-204ENST00000599689 DNMBPQ6XZF7 1577 aa38.06■■■■□ 3.68
SHD-204ENST00000599689 IFT140Q96RY7 1462 aa38■■■■□ 3.67
SHD-204ENST00000599689 ZNF608Q9ULD9 1512 aaPredicted RBP37.83■■■■□ 3.65
SHD-204ENST00000599689 POLA1P09884 1462 aaPredicted RBP37.81■■■■□ 3.64
SHD-204ENST00000599689 CUX1P39880 1505 aa37.75■■■■□ 3.63
SHD-204ENST00000599689 TARBP1Q13395 1621 aaKnown RBP37.72■■■■□ 3.63
SHD-204ENST00000599689 LOC105371045A0A1W2PR82 267 aa37.7■■■■□ 3.63
SHD-204ENST00000599689 SOGA1O94964 1423 aa37.68■■■■□ 3.62
SHD-204ENST00000599689 FGD5Q6ZNL6 1462 aa37.67■■■■□ 3.62
SHD-204ENST00000599689 RAD54L2Q9Y4B4 1467 aa37.65■■■■□ 3.62
SHD-204ENST00000599689 WRNQ14191 1432 aaPredicted RBP eCLIP37.64■■■■□ 3.62
SHD-204ENST00000599689 EIF4G3O43432 1585 aaKnown RBP37.62■■■■□ 3.61
SHD-204ENST00000599689 AQRO60306 1485 aaKnown RBP eCLIP37.6■■■■□ 3.61
SHD-204ENST00000599689 FAM9AQ8IZU1 332 aaPredicted RBP37.59■■■■□ 3.61
SHD-204ENST00000599689 OSCARQ8IYS5 282 aa37.58■■■■□ 3.61
SHD-204ENST00000599689 TDRD9Q8NDG6 1382 aaKnown RBP37.5■■■■□ 3.59
SHD-204ENST00000599689 SYNJ1O43426 1573 aa37.5■■■■□ 3.59
SHD-204ENST00000599689 WDR97A6NE52 1622 aa37.42■■■■□ 3.58
SHD-204ENST00000599689 TOP2BQ02880 1626 aa37.34■■■■□ 3.57
SHD-204ENST00000599689 ABCA10Q8WWZ4 1543 aa37.31■■■■□ 3.56
SHD-204ENST00000599689 BIVM-ERCC5R4GMW8 1640 aa37.3■■■■□ 3.56
SHD-204ENST00000599689 EEA1Q15075 1411 aa37.27■■■■□ 3.56
SHD-204ENST00000599689 GRIN2BQ13224 1484 aa37.26■■■■□ 3.56
SHD-204ENST00000599689 FBLN2P98095 1184 aa37.23■■■■□ 3.55
SHD-204ENST00000599689 GAPVD1Q14C86 1478 aa37.22■■■■□ 3.55
SHD-204ENST00000599689 SNAPC4Q5SXM2 1469 aa37.22■■■■□ 3.55
SHD-204ENST00000599689 MAGI1Q96QZ7 1491 aaPredicted RBP37.18■■■■□ 3.54
SHD-204ENST00000599689 RUSC2Q8N2Y8 1516 aa37.15■■■■□ 3.54
SHD-204ENST00000599689 CHD1O14646 1710 aa37.14■■■■□ 3.54
SHD-204ENST00000599689 ABCA5Q8WWZ7 1642 aa37.13■■■■□ 3.53
SHD-204ENST00000599689 CHMP7Q8WUX9 453 aaPredicted RBP37.1■■■■□ 3.53
SHD-204ENST00000599689 CSRNP3Q8WYN3 585 aa37.05■■■■□ 3.52
SHD-204ENST00000599689 SYNJ2O15056 1496 aa37.05■■■■□ 3.52
SHD-204ENST00000599689 EHMT2Q96KQ7 1210 aa37.05■■■■□ 3.52
SHD-204ENST00000599689 PBRM1Q86U86 1689 aa37.04■■■■□ 3.52
SHD-204ENST00000599689 ARHGEF11O15085 1522 aa36.9■■■■□ 3.5
SHD-204ENST00000599689 RIMBP3CA6NJZ7 1639 aa36.89■■■■□ 3.5
SHD-204ENST00000599689 RIMBP3BA6NNM3 1639 aa36.89■■■■□ 3.5
SHD-204ENST00000599689 RIMBP3Q9UFD9 1639 aa36.89■■■■□ 3.5
SHD-204ENST00000599689 ERICH3Q5RHP9 1530 aa36.85■■■■□ 3.49
SHD-204ENST00000599689 CLASP1Q7Z460 1538 aa36.82■■■■□ 3.48
SHD-204ENST00000599689 ADAMTS12P58397 1594 aa36.8■■■■□ 3.48
SHD-204ENST00000599689 FHAD1B1AJZ9 1412 aa36.8■■■■□ 3.48
SHD-204ENST00000599689 KIF21BO75037 1637 aa36.8■■■■□ 3.48
SHD-204ENST00000599689 GOLGA3Q08378 1498 aa36.78■■■■□ 3.48
SHD-204ENST00000599689 GRIN2AQ12879 1464 aa36.77■■■■□ 3.48
SHD-204ENST00000599689 TNIKQ9UKE5 1360 aa36.73■■■■□ 3.47
SHD-204ENST00000599689 KIF27Q86VH2 1401 aa36.69■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms