RNA–Protein interactions for RNA: ENST00000599689.1

SHD-204, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 5 BASIC

Gene SHD, Length 1,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-204ENST00000599689 NISCHQ9Y2I1 1504 aa52.21■■■■■ 5.95
SHD-204ENST00000599689 CCDC180Q9P1Z9 1646 aa46.47■■■■■ 5.03
SHD-204ENST00000599689 ABCC9O60706 1549 aa45.8■■■■■ 4.92
SHD-204ENST00000599689 RB1CC1Q8TDY2 1594 aa43.92■■■■■ 4.62
SHD-204ENST00000599689 NACADO15069 1562 aa43.82■■■■■ 4.61
SHD-204ENST00000599689 DCAF8L2P0C7V8 631 aa43.78■■■■■ 4.6
SHD-204ENST00000599689 MYO15BQ96JP2 1530 aa43.5■■■■■ 4.55
SHD-204ENST00000599689 ZCCHC6Q5VYS8 1495 aaKnown RBP43.43■■■■■ 4.54
SHD-204ENST00000599689 DCAF1Q9Y4B6 1507 aa43.2■■■■■ 4.51
SHD-204ENST00000599689 PABPN1Q86U42 306 aaKnown RBP eCLIP42.79■■■■■ 4.44
SHD-204ENST00000599689 UNC13AQ9UPW8 1703 aa42.79■■■■■ 4.44
SHD-204ENST00000599689 BICRAQ9NZM4 1560 aa42.58■■■■■ 4.41
SHD-204ENST00000599689 SCRIBQ14160 1630 aa42.39■■■■■ 4.38
SHD-204ENST00000599689 DNAJC5BQ9UF47 199 aa42.32■■■■■ 4.37
SHD-204ENST00000599689 SHROOM4Q9ULL8 1493 aa42.17■■■■■ 4.34
SHD-204ENST00000599689 EIF4G1Q04637 1599 aaKnown RBP41.5■■■■■ 4.23
SHD-204ENST00000599689 CC2D2AQ9P2K1 1620 aa41.38■■■■■ 4.22
SHD-204ENST00000599689 CECR2Q9BXF3 1484 aa41.2■■■■■ 4.19
SHD-204ENST00000599689 SUPT5HO00267 1087 aaKnown RBP40.73■■■■■ 4.11
SHD-204ENST00000599689 SMARCA4P51532 1647 aa40.53■■■■■ 4.08
SHD-204ENST00000599689 BAZ1AQ9NRL2 1556 aaPredicted RBP40.48■■■■■ 4.07
SHD-204ENST00000599689 NCAPD3P42695 1498 aa40.48■■■■■ 4.07
SHD-204ENST00000599689 ATAD2BQ9ULI0 1458 aa40.44■■■■■ 4.06
SHD-204ENST00000599689 SMARCA2P51531 1590 aa40.36■■■■■ 4.05
SHD-204ENST00000599689 MROH2BQ7Z745 1585 aa40.22■■■■■ 4.03
SHD-204ENST00000599689 HMGXB3Q12766 1538 aa40.21■■■■■ 4.03
SHD-204ENST00000599689 PEG3Q9GZU2 1588 aa40.17■■■■■ 4.02
SHD-204ENST00000599689 BAZ1BQ9UIG0 1483 aaKnown RBP40.09■■■■■ 4.01
SHD-204ENST00000599689 RSF1Q96T23 1441 aaPredicted RBP40.01■■■■■ 4
SHD-204ENST00000599689 WIZO95785 1651 aa39.73■■■■□ 3.95
SHD-204ENST00000599689 NESP48681 1621 aa39.54■■■■□ 3.92
SHD-204ENST00000599689 ERCC6Q03468 1493 aa39.52■■■■□ 3.92
SHD-204ENST00000599689 LAMC3Q9Y6N6 1575 aa39.4■■■■□ 3.9
SHD-204ENST00000599689 TOP2AP11388 1531 aaKnown RBP39.33■■■■□ 3.89
SHD-204ENST00000599689 CADPSQ9ULU8 1353 aa39.29■■■■□ 3.88
SHD-204ENST00000599689 CUX2O14529 1486 aa39.2■■■■□ 3.87
SHD-204ENST00000599689 PDS5BQ9NTI5 1447 aa39.2■■■■□ 3.87
SHD-204ENST00000599689 CHIC1Q5VXU3 224 aa39.17■■■■□ 3.86
SHD-204ENST00000599689 CFTRP13569 1480 aa38.99■■■■□ 3.83
SHD-204ENST00000599689 KIF21AQ7Z4S6 1674 aa38.98■■■■□ 3.83
SHD-204ENST00000599689 THOC2Q8NI27 1593 aaKnown RBP38.96■■■■□ 3.83
SHD-204ENST00000599689 CCDC88BA6NC98 1476 aa38.9■■■■□ 3.82
SHD-204ENST00000599689 FANCD2Q9BXW9 1451 aa38.81■■■■□ 3.8
SHD-204ENST00000599689 MRC2Q9UBG0 1479 aa38.79■■■■□ 3.8
SHD-204ENST00000599689 CEP164Q9UPV0 1460 aa38.78■■■■□ 3.8
SHD-204ENST00000599689 WDR62O43379 1518 aa38.65■■■■□ 3.78
SHD-204ENST00000599689 PRDM2Q13029 1718 aa38.5■■■■□ 3.75
SHD-204ENST00000599689 URB2Q14146 1524 aaKnown RBP38.42■■■■□ 3.74
SHD-204ENST00000599689 DNAJC5Q9H3Z4 198 aa38.36■■■■□ 3.73
SHD-204ENST00000599689 TRIM41Q8WV44 630 aa38.28■■■■□ 3.72
SHD-204ENST00000599689 ABCC8Q09428 1581 aa38.16■■■■□ 3.7
SHD-204ENST00000599689 TOPBP1Q92547 1522 aa38.15■■■■□ 3.7
SHD-204ENST00000599689 DNMBPQ6XZF7 1577 aa38.06■■■■□ 3.68
SHD-204ENST00000599689 IFT140Q96RY7 1462 aa38■■■■□ 3.67
SHD-204ENST00000599689 ZNF608Q9ULD9 1512 aaPredicted RBP37.83■■■■□ 3.65
SHD-204ENST00000599689 POLA1P09884 1462 aaPredicted RBP37.81■■■■□ 3.64
SHD-204ENST00000599689 CUX1P39880 1505 aa37.75■■■■□ 3.63
SHD-204ENST00000599689 TARBP1Q13395 1621 aaKnown RBP37.72■■■■□ 3.63
SHD-204ENST00000599689 LOC105371045A0A1W2PR82 267 aa37.7■■■■□ 3.63
SHD-204ENST00000599689 SOGA1O94964 1423 aa37.68■■■■□ 3.62
SHD-204ENST00000599689 FGD5Q6ZNL6 1462 aa37.67■■■■□ 3.62
SHD-204ENST00000599689 RAD54L2Q9Y4B4 1467 aa37.65■■■■□ 3.62
SHD-204ENST00000599689 WRNQ14191 1432 aaPredicted RBP eCLIP37.64■■■■□ 3.62
SHD-204ENST00000599689 EIF4G3O43432 1585 aaKnown RBP37.62■■■■□ 3.61
SHD-204ENST00000599689 AQRO60306 1485 aaKnown RBP eCLIP37.6■■■■□ 3.61
SHD-204ENST00000599689 FAM9AQ8IZU1 332 aaPredicted RBP37.59■■■■□ 3.61
SHD-204ENST00000599689 OSCARQ8IYS5 282 aa37.58■■■■□ 3.61
SHD-204ENST00000599689 TDRD9Q8NDG6 1382 aaKnown RBP37.5■■■■□ 3.59
SHD-204ENST00000599689 SYNJ1O43426 1573 aa37.5■■■■□ 3.59
SHD-204ENST00000599689 WDR97A6NE52 1622 aa37.42■■■■□ 3.58
SHD-204ENST00000599689 TOP2BQ02880 1626 aa37.34■■■■□ 3.57
SHD-204ENST00000599689 ABCA10Q8WWZ4 1543 aa37.31■■■■□ 3.56
SHD-204ENST00000599689 BIVM-ERCC5R4GMW8 1640 aa37.3■■■■□ 3.56
SHD-204ENST00000599689 EEA1Q15075 1411 aa37.27■■■■□ 3.56
SHD-204ENST00000599689 GRIN2BQ13224 1484 aa37.26■■■■□ 3.56
SHD-204ENST00000599689 FBLN2P98095 1184 aa37.23■■■■□ 3.55
SHD-204ENST00000599689 GAPVD1Q14C86 1478 aa37.22■■■■□ 3.55
SHD-204ENST00000599689 SNAPC4Q5SXM2 1469 aa37.22■■■■□ 3.55
SHD-204ENST00000599689 MAGI1Q96QZ7 1491 aaPredicted RBP37.18■■■■□ 3.54
SHD-204ENST00000599689 RUSC2Q8N2Y8 1516 aa37.15■■■■□ 3.54
SHD-204ENST00000599689 CHD1O14646 1710 aa37.14■■■■□ 3.54
SHD-204ENST00000599689 ABCA5Q8WWZ7 1642 aa37.13■■■■□ 3.53
SHD-204ENST00000599689 CHMP7Q8WUX9 453 aaPredicted RBP37.1■■■■□ 3.53
SHD-204ENST00000599689 CSRNP3Q8WYN3 585 aa37.05■■■■□ 3.52
SHD-204ENST00000599689 SYNJ2O15056 1496 aa37.05■■■■□ 3.52
SHD-204ENST00000599689 EHMT2Q96KQ7 1210 aa37.05■■■■□ 3.52
SHD-204ENST00000599689 PBRM1Q86U86 1689 aa37.04■■■■□ 3.52
SHD-204ENST00000599689 ARHGEF11O15085 1522 aa36.9■■■■□ 3.5
SHD-204ENST00000599689 RIMBP3CA6NJZ7 1639 aa36.89■■■■□ 3.5
SHD-204ENST00000599689 RIMBP3BA6NNM3 1639 aa36.89■■■■□ 3.5
SHD-204ENST00000599689 RIMBP3Q9UFD9 1639 aa36.89■■■■□ 3.5
SHD-204ENST00000599689 ERICH3Q5RHP9 1530 aa36.85■■■■□ 3.49
SHD-204ENST00000599689 CLASP1Q7Z460 1538 aa36.82■■■■□ 3.48
SHD-204ENST00000599689 ADAMTS12P58397 1594 aa36.8■■■■□ 3.48
SHD-204ENST00000599689 FHAD1B1AJZ9 1412 aa36.8■■■■□ 3.48
SHD-204ENST00000599689 KIF21BO75037 1637 aa36.8■■■■□ 3.48
SHD-204ENST00000599689 GOLGA3Q08378 1498 aa36.78■■■■□ 3.48
SHD-204ENST00000599689 GRIN2AQ12879 1464 aa36.77■■■■□ 3.48
SHD-204ENST00000599689 TNIKQ9UKE5 1360 aa36.73■■■■□ 3.47
SHD-204ENST00000599689 KIF27Q86VH2 1401 aa36.69■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms