RNA–Protein interactions for RNA: ENST00000344523.8

NR6A1-201, Transcript of nuclear receptor subfamily 6 group A member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NR6A1, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR6A1-201ENST00000344523 NISCHQ9Y2I1 1504 aa55.18■■■■■ 6.42
NR6A1-201ENST00000344523 CCDC180Q9P1Z9 1646 aa48.49■■■■■ 5.35
NR6A1-201ENST00000344523 ABCC9O60706 1549 aa47■■■■■ 5.11
NR6A1-201ENST00000344523 DCAF8L2P0C7V8 631 aa46.13■■■■■ 4.98
NR6A1-201ENST00000344523 ZCCHC6Q5VYS8 1495 aaKnown RBP46.11■■■■■ 4.97
NR6A1-201ENST00000344523 DCAF1Q9Y4B6 1507 aa45.54■■■■■ 4.88
NR6A1-201ENST00000344523 NACADO15069 1562 aa45.48■■■■■ 4.87
NR6A1-201ENST00000344523 MYO15BQ96JP2 1530 aa45.38■■■■■ 4.86
NR6A1-201ENST00000344523 RB1CC1Q8TDY2 1594 aa45.35■■■■■ 4.85
NR6A1-201ENST00000344523 SCRIBQ14160 1630 aa44.58■■■■■ 4.73
NR6A1-201ENST00000344523 SHROOM4Q9ULL8 1493 aa44.44■■■■■ 4.7
NR6A1-201ENST00000344523 UNC13AQ9UPW8 1703 aa44.33■■■■■ 4.69
NR6A1-201ENST00000344523 PABPN1Q86U42 306 aaKnown RBP eCLIP44.2■■■■■ 4.67
NR6A1-201ENST00000344523 BICRAQ9NZM4 1560 aa44.02■■■■■ 4.64
NR6A1-201ENST00000344523 CECR2Q9BXF3 1484 aa43.03■■■■■ 4.48
NR6A1-201ENST00000344523 EIF4G1Q04637 1599 aaKnown RBP42.79■■■■■ 4.44
NR6A1-201ENST00000344523 BAZ1AQ9NRL2 1556 aaPredicted RBP42.65■■■■■ 4.42
NR6A1-201ENST00000344523 MROH2BQ7Z745 1585 aa42.63■■■■■ 4.41
NR6A1-201ENST00000344523 SMARCA4P51532 1647 aa42.61■■■■■ 4.41
NR6A1-201ENST00000344523 DNAJC5BQ9UF47 199 aa42.51■■■■■ 4.4
NR6A1-201ENST00000344523 RSF1Q96T23 1441 aaPredicted RBP42.44■■■■■ 4.38
NR6A1-201ENST00000344523 CC2D2AQ9P2K1 1620 aa42.43■■■■■ 4.38
NR6A1-201ENST00000344523 SUPT5HO00267 1087 aaKnown RBP42.24■■■■■ 4.35
NR6A1-201ENST00000344523 ATAD2BQ9ULI0 1458 aa42.23■■■■■ 4.35
NR6A1-201ENST00000344523 WIZO95785 1651 aa42.19■■■■■ 4.34
NR6A1-201ENST00000344523 SMARCA2P51531 1590 aa42.12■■■■■ 4.33
NR6A1-201ENST00000344523 PEG3Q9GZU2 1588 aa42.09■■■■■ 4.33
NR6A1-201ENST00000344523 NCAPD3P42695 1498 aa42.03■■■■■ 4.32
NR6A1-201ENST00000344523 BAZ1BQ9UIG0 1483 aaKnown RBP41.92■■■■■ 4.3
NR6A1-201ENST00000344523 HMGXB3Q12766 1538 aa41.82■■■■■ 4.29
NR6A1-201ENST00000344523 TOP2AP11388 1531 aaKnown RBP41.69■■■■■ 4.26
NR6A1-201ENST00000344523 CCDC88BA6NC98 1476 aa41.32■■■■■ 4.21
NR6A1-201ENST00000344523 NESP48681 1621 aa40.93■■■■■ 4.14
NR6A1-201ENST00000344523 CADPSQ9ULU8 1353 aa40.92■■■■■ 4.14
NR6A1-201ENST00000344523 CFTRP13569 1480 aa40.81■■■■■ 4.12
NR6A1-201ENST00000344523 LAMC3Q9Y6N6 1575 aa40.72■■■■■ 4.11
NR6A1-201ENST00000344523 PDS5BQ9NTI5 1447 aa40.51■■■■■ 4.07
NR6A1-201ENST00000344523 FANCD2Q9BXW9 1451 aa40.45■■■■■ 4.07
NR6A1-201ENST00000344523 ERCC6Q03468 1493 aa40.39■■■■■ 4.06
NR6A1-201ENST00000344523 PRDM2Q13029 1718 aa40.36■■■■■ 4.05
NR6A1-201ENST00000344523 KIF21AQ7Z4S6 1674 aa40.32■■■■■ 4.05
NR6A1-201ENST00000344523 CEP164Q9UPV0 1460 aa40.28■■■■■ 4.04
NR6A1-201ENST00000344523 ABCC8Q09428 1581 aa40.12■■■■■ 4.01
NR6A1-201ENST00000344523 MRC2Q9UBG0 1479 aa40.03■■■■■ 4
NR6A1-201ENST00000344523 URB2Q14146 1524 aaKnown RBP40.01■■■■□ 3.99
NR6A1-201ENST00000344523 WRNQ14191 1432 aaPredicted RBP eCLIP39.97■■■■□ 3.99
NR6A1-201ENST00000344523 THOC2Q8NI27 1593 aaKnown RBP39.94■■■■□ 3.98
NR6A1-201ENST00000344523 CUX1P39880 1505 aa39.92■■■■□ 3.98
NR6A1-201ENST00000344523 TOPBP1Q92547 1522 aa39.88■■■■□ 3.97
NR6A1-201ENST00000344523 DNMBPQ6XZF7 1577 aa39.83■■■■□ 3.97
NR6A1-201ENST00000344523 WDR62O43379 1518 aa39.83■■■■□ 3.97
NR6A1-201ENST00000344523 SYNJ1O43426 1573 aa39.82■■■■□ 3.97
NR6A1-201ENST00000344523 CHIC1Q5VXU3 224 aa39.81■■■■□ 3.96
NR6A1-201ENST00000344523 TRIM41Q8WV44 630 aa39.75■■■■□ 3.95
NR6A1-201ENST00000344523 TOP2BQ02880 1626 aa39.7■■■■□ 3.95
NR6A1-201ENST00000344523 FGD5Q6ZNL6 1462 aa39.65■■■■□ 3.94
NR6A1-201ENST00000344523 BIVM-ERCC5R4GMW8 1640 aa39.64■■■■□ 3.94
NR6A1-201ENST00000344523 POLA1P09884 1462 aaPredicted RBP39.62■■■■□ 3.93
NR6A1-201ENST00000344523 CUX2O14529 1486 aa39.54■■■■□ 3.92
NR6A1-201ENST00000344523 RAD54L2Q9Y4B4 1467 aa39.53■■■■□ 3.92
NR6A1-201ENST00000344523 SOGA1O94964 1423 aa39.51■■■■□ 3.91
NR6A1-201ENST00000344523 IFT140Q96RY7 1462 aa39.37■■■■□ 3.89
NR6A1-201ENST00000344523 TARBP1Q13395 1621 aaKnown RBP39.32■■■■□ 3.89
NR6A1-201ENST00000344523 TDRD9Q8NDG6 1382 aaKnown RBP39.27■■■■□ 3.88
NR6A1-201ENST00000344523 ZNF608Q9ULD9 1512 aaPredicted RBP39.26■■■■□ 3.88
NR6A1-201ENST00000344523 ABCA10Q8WWZ4 1543 aa39.24■■■■□ 3.87
NR6A1-201ENST00000344523 AQRO60306 1485 aaKnown RBP eCLIP39.18■■■■□ 3.863e-6■■■■□ 22.2
NR6A1-201ENST00000344523 WDR97A6NE52 1622 aa39.13■■■■□ 3.85
NR6A1-201ENST00000344523 RUSC2Q8N2Y8 1516 aa39.11■■■■□ 3.85
NR6A1-201ENST00000344523 FAM9AQ8IZU1 332 aaPredicted RBP39.06■■■■□ 3.84
NR6A1-201ENST00000344523 KIF27Q86VH2 1401 aa39.05■■■■□ 3.84
NR6A1-201ENST00000344523 GAPVD1Q14C86 1478 aa39.03■■■■□ 3.84
NR6A1-201ENST00000344523 EIF4G3O43432 1585 aaKnown RBP39.02■■■■□ 3.84
NR6A1-201ENST00000344523 ABCA5Q8WWZ7 1642 aa38.97■■■■□ 3.83
NR6A1-201ENST00000344523 GRIN2BQ13224 1484 aa38.87■■■■□ 3.81
NR6A1-201ENST00000344523 IGF1RP08069 1367 aa38.86■■■■□ 3.81
NR6A1-201ENST00000344523 CSRNP3Q8WYN3 585 aa38.79■■■■□ 3.8
NR6A1-201ENST00000344523 PBRM1Q86U86 1689 aa38.78■■■■□ 3.8
NR6A1-201ENST00000344523 EEA1Q15075 1411 aa38.76■■■■□ 3.8
NR6A1-201ENST00000344523 SNAPC4Q5SXM2 1469 aa38.76■■■■□ 3.8
NR6A1-201ENST00000344523 ERICH3Q5RHP9 1530 aa38.74■■■■□ 3.79
NR6A1-201ENST00000344523 FBLN2P98095 1184 aa38.66■■■■□ 3.78
NR6A1-201ENST00000344523 CARMIL1Q5VZK9 1371 aa38.64■■■■□ 3.78
NR6A1-201ENST00000344523 MAGI1Q96QZ7 1491 aaPredicted RBP38.63■■■■□ 3.77
NR6A1-201ENST00000344523 EHMT2Q96KQ7 1210 aa38.62■■■■□ 3.77
NR6A1-201ENST00000344523 CHMP7Q8WUX9 453 aaPredicted RBP38.58■■■■□ 3.77
NR6A1-201ENST00000344523 FHAD1B1AJZ9 1412 aa38.57■■■■□ 3.77
NR6A1-201ENST00000344523 ADAMTS12P58397 1594 aa38.55■■■■□ 3.76
NR6A1-201ENST00000344523 SYNJ2O15056 1496 aa38.51■■■■□ 3.76
NR6A1-201ENST00000344523 CUL7Q14999 1698 aa38.51■■■■□ 3.75
NR6A1-201ENST00000344523 PRXQ9BXM0 1461 aa38.5■■■■□ 3.75
NR6A1-201ENST00000344523 RAPGEF2Q9Y4G8 1499 aa38.44■■■■□ 3.74
NR6A1-201ENST00000344523 GRIN2AQ12879 1464 aa38.38■■■■□ 3.74
NR6A1-201ENST00000344523 CHD1O14646 1710 aa38.35■■■■□ 3.73
NR6A1-201ENST00000344523 LOC105371045A0A1W2PR82 267 aa38.33■■■■□ 3.73
NR6A1-201ENST00000344523 KIF21BO75037 1637 aa38.3■■■■□ 3.72
NR6A1-201ENST00000344523 UBTFP17480 764 aaKnown RBP38.24■■■■□ 3.71
NR6A1-201ENST00000344523 GOLGA3Q08378 1498 aa38.22■■■■□ 3.71
NR6A1-201ENST00000344523 OSCARQ8IYS5 282 aa38.22■■■■□ 3.71
NR6A1-201ENST00000344523 CEP170Q5SW79 1584 aa38.16■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms