RNA–Protein interactions for RNA: ENST00000514375.1

SLC9A3-203, Transcript of solute carrier family 9 member A3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLC9A3, Length 2,504 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3-203ENST00000514375 NISCHQ9Y2I1 1504 aa51.23■■■■■ 5.79
SLC9A3-203ENST00000514375 CCDC180Q9P1Z9 1646 aa44.22■■■■■ 4.67
SLC9A3-203ENST00000514375 ZCCHC6Q5VYS8 1495 aaKnown RBP43.08■■■■■ 4.49
SLC9A3-203ENST00000514375 DCAF8L2P0C7V8 631 aa42.61■■■■■ 4.41
SLC9A3-203ENST00000514375 SHROOM4Q9ULL8 1493 aa42.5■■■■■ 4.39
SLC9A3-203ENST00000514375 DCAF1Q9Y4B6 1507 aa42.13■■■■■ 4.33
SLC9A3-203ENST00000514375 ABCC9O60706 1549 aa41.94■■■■■ 4.3
SLC9A3-203ENST00000514375 MYO15BQ96JP2 1530 aa41.42■■■■■ 4.22
SLC9A3-203ENST00000514375 NACADO15069 1562 aa41.18■■■■■ 4.18
SLC9A3-203ENST00000514375 SCRIBQ14160 1630 aa41.09■■■■■ 4.17
SLC9A3-203ENST00000514375 SUPT5HO00267 1087 aaKnown RBP41.06■■■■■ 4.16
SLC9A3-203ENST00000514375 RB1CC1Q8TDY2 1594 aa40.77■■■■■ 4.12
SLC9A3-203ENST00000514375 UNC13AQ9UPW8 1703 aa40.08■■■■■ 4.01
SLC9A3-203ENST00000514375 RSF1Q96T23 1441 aaPredicted RBP40■■■■□ 3.99
SLC9A3-203ENST00000514375 CECR2Q9BXF3 1484 aa39.99■■■■□ 3.99
SLC9A3-203ENST00000514375 PABPN1Q86U42 306 aaKnown RBP eCLIP39.8■■■■□ 3.96
SLC9A3-203ENST00000514375 MROH2BQ7Z745 1585 aa39.73■■■■□ 3.95
SLC9A3-203ENST00000514375 BICRAQ9NZM4 1560 aa39.71■■■■□ 3.95
SLC9A3-203ENST00000514375 BAZ1AQ9NRL2 1556 aaPredicted RBP39.44■■■■□ 3.9
SLC9A3-203ENST00000514375 WIZO95785 1651 aa39.42■■■■□ 3.9
SLC9A3-203ENST00000514375 CHIC1Q5VXU3 224 aa39.39■■■■□ 3.9
SLC9A3-203ENST00000514375 SMARCA4P51532 1647 aa39.27■■■■□ 3.88
SLC9A3-203ENST00000514375 TOP2AP11388 1531 aaKnown RBP38.84■■■■□ 3.81
SLC9A3-203ENST00000514375 PEG3Q9GZU2 1588 aa38.65■■■■□ 3.78
SLC9A3-203ENST00000514375 CCDC88BA6NC98 1476 aa38.62■■■■□ 3.77
SLC9A3-203ENST00000514375 ATAD2BQ9ULI0 1458 aa38.59■■■■□ 3.77
SLC9A3-203ENST00000514375 SMARCA2P51531 1590 aa38.57■■■■□ 3.77
SLC9A3-203ENST00000514375 EIF4G1Q04637 1599 aaKnown RBP38.44■■■■□ 3.74
SLC9A3-203ENST00000514375 TRIM41Q8WV44 630 aa38.4■■■■□ 3.74
SLC9A3-203ENST00000514375 BAZ1BQ9UIG0 1483 aaKnown RBP38.38■■■■□ 3.73
SLC9A3-203ENST00000514375 NCAPD3P42695 1498 aa38.11■■■■□ 3.69
SLC9A3-203ENST00000514375 LOC105371045A0A1W2PR82 267 aa38.1■■■■□ 3.69
SLC9A3-203ENST00000514375 ABCC8Q09428 1581 aa38.02■■■■□ 3.68
SLC9A3-203ENST00000514375 HMGXB3Q12766 1538 aa38■■■■□ 3.67
SLC9A3-203ENST00000514375 FAM9AQ8IZU1 332 aaPredicted RBP37.96■■■■□ 3.67
SLC9A3-203ENST00000514375 CC2D2AQ9P2K1 1620 aa37.82■■■■□ 3.64
SLC9A3-203ENST00000514375 EHMT2Q96KQ7 1210 aa37.59■■■■□ 3.61
SLC9A3-203ENST00000514375 WRNQ14191 1432 aaPredicted RBP eCLIP37.59■■■■□ 3.61
SLC9A3-203ENST00000514375 SYNJ1O43426 1573 aa37.46■■■■□ 3.59
SLC9A3-203ENST00000514375 SOGA1O94964 1423 aa37.43■■■■□ 3.58
SLC9A3-203ENST00000514375 CFTRP13569 1480 aa37.42■■■■□ 3.58
SLC9A3-203ENST00000514375 RUSC2Q8N2Y8 1516 aa37.32■■■■□ 3.56
SLC9A3-203ENST00000514375 CADPSQ9ULU8 1353 aa37.24■■■■□ 3.55
SLC9A3-203ENST00000514375 DNAJC5BQ9UF47 199 aa37.21■■■■□ 3.55
SLC9A3-203ENST00000514375 TOP2BQ02880 1626 aa37.14■■■■□ 3.54
SLC9A3-203ENST00000514375 CSRNP3Q8WYN3 585 aa37.09■■■■□ 3.53
SLC9A3-203ENST00000514375 CUX1P39880 1505 aa37.08■■■■□ 3.53
SLC9A3-203ENST00000514375 EEA1Q15075 1411 aa37.05■■■■□ 3.52
SLC9A3-203ENST00000514375 BIVM-ERCC5R4GMW8 1640 aa37.05■■■■□ 3.52
SLC9A3-203ENST00000514375 PRDM2Q13029 1718 aa37.02■■■■□ 3.52
SLC9A3-203ENST00000514375 NESP48681 1621 aa36.98■■■■□ 3.51
SLC9A3-203ENST00000514375 FANCD2Q9BXW9 1451 aa36.85■■■■□ 3.49
SLC9A3-203ENST00000514375 UBTFP17480 764 aaKnown RBP36.75■■■■□ 3.47
SLC9A3-203ENST00000514375 GOLGA3Q08378 1498 aa36.7■■■■□ 3.47
SLC9A3-203ENST00000514375 PCGF6Q9BYE7 350 aa36.69■■■■□ 3.46
SLC9A3-203ENST00000514375 TNIKQ9UKE5 1360 aa36.69■■■■□ 3.46
SLC9A3-203ENST00000514375 LAMC3Q9Y6N6 1575 aa36.67■■■■□ 3.46
SLC9A3-203ENST00000514375 CEP164Q9UPV0 1460 aa36.65■■■■□ 3.46
SLC9A3-203ENST00000514375 CEP162Q5TB80 1403 aa36.61■■■■□ 3.45
SLC9A3-203ENST00000514375 KIF21BO75037 1637 aa36.61■■■■□ 3.45
SLC9A3-203ENST00000514375 FGD5Q6ZNL6 1462 aa36.6■■■■□ 3.45
SLC9A3-203ENST00000514375 RAPGEF2Q9Y4G8 1499 aa36.58■■■■□ 3.45
SLC9A3-203ENST00000514375 KIF27Q86VH2 1401 aa36.55■■■■□ 3.44
SLC9A3-203ENST00000514375 TOPBP1Q92547 1522 aa36.48■■■■□ 3.43
SLC9A3-203ENST00000514375 DNMBPQ6XZF7 1577 aa36.47■■■■□ 3.43
SLC9A3-203ENST00000514375 CUX2O14529 1486 aa36.47■■■■□ 3.43
SLC9A3-203ENST00000514375 PDS5BQ9NTI5 1447 aa36.45■■■■□ 3.43
SLC9A3-203ENST00000514375 PRXQ9BXM0 1461 aa36.43■■■■□ 3.42
SLC9A3-203ENST00000514375 URB2Q14146 1524 aaKnown RBP36.41■■■■□ 3.42
SLC9A3-203ENST00000514375 PPARGC1BQ86YN6 1023 aaKnown RBP36.4■■■■□ 3.42
SLC9A3-203ENST00000514375 RAD54L2Q9Y4B4 1467 aa36.38■■■■□ 3.41
SLC9A3-203ENST00000514375 TRIM26Q12899 539 aaPredicted RBP36.37■■■■□ 3.41
SLC9A3-203ENST00000514375 POLA1P09884 1462 aaPredicted RBP36.37■■■■□ 3.41
SLC9A3-203ENST00000514375 KIF21AQ7Z4S6 1674 aa36.35■■■■□ 3.41
SLC9A3-203ENST00000514375 IGF1RP08069 1367 aa36.31■■■■□ 3.4
SLC9A3-203ENST00000514375 RANGAP1P46060 587 aaPredicted RBP36.3■■■■□ 3.4
SLC9A3-203ENST00000514375 ERICH3Q5RHP9 1530 aa36.27■■■■□ 3.4
SLC9A3-203ENST00000514375 CLIP1P30622 1438 aa36.22■■■■□ 3.39
SLC9A3-203ENST00000514375 ABCA10Q8WWZ4 1543 aa36.19■■■■□ 3.38
SLC9A3-203ENST00000514375 CARMIL1Q5VZK9 1371 aa36.11■■■■□ 3.37
SLC9A3-203ENST00000514375 TTBK1Q5TCY1 1321 aaPredicted RBP36.03■■■■□ 3.36
SLC9A3-203ENST00000514375 TDRD9Q8NDG6 1382 aaKnown RBP36.02■■■■□ 3.36
SLC9A3-203ENST00000514375 MRC2Q9UBG0 1479 aa35.97■■■■□ 3.35
SLC9A3-203ENST00000514375 WDR97A6NE52 1622 aa35.97■■■■□ 3.35
SLC9A3-203ENST00000514375 VPS8Q8N3P4 1428 aa35.9■■■■□ 3.34
SLC9A3-203ENST00000514375 TARBP1Q13395 1621 aaKnown RBP35.87■■■■□ 3.33
SLC9A3-203ENST00000514375 ABCA5Q8WWZ7 1642 aa35.84■■■■□ 3.33
SLC9A3-203ENST00000514375 GAPVD1Q14C86 1478 aa35.84■■■■□ 3.33
SLC9A3-203ENST00000514375 ARAP1Q96P48 1450 aa35.83■■■■□ 3.33
SLC9A3-203ENST00000514375 HRCP23327 699 aa35.81■■■■□ 3.32
SLC9A3-203ENST00000514375 ERCC6Q03468 1493 aa35.8■■■■□ 3.32
SLC9A3-203ENST00000514375 ARHGAP35Q9NRY4 1499 aa35.75■■■■□ 3.31
SLC9A3-203ENST00000514375 WDR62O43379 1518 aa35.74■■■■□ 3.31
SLC9A3-203ENST00000514375 CUL7Q14999 1698 aa35.73■■■■□ 3.31
SLC9A3-203ENST00000514375 AQRO60306 1485 aaKnown RBP eCLIP35.71■■■■□ 3.31
SLC9A3-203ENST00000514375 ZNF608Q9ULD9 1512 aaPredicted RBP35.61■■■■□ 3.29
SLC9A3-203ENST00000514375 APLP2Q06481 763 aa35.59■■■■□ 3.29
SLC9A3-203ENST00000514375 THOC2Q8NI27 1593 aaKnown RBP35.58■■■■□ 3.29
SLC9A3-203ENST00000514375 IFT140Q96RY7 1462 aa35.57■■■■□ 3.28
SLC9A3-203ENST00000514375 P3H3Q8IVL6 736 aa35.54■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms