RNA–Protein interactions for RNA: ENST00000553897.5

PRMT5-213, Transcript of protein arginine methyltransferase 5, humanhuman

TSL 2 BASIC

Gene PRMT5, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRMT5-213ENST00000553897 NISCHQ9Y2I1 1504 aa51.22■■■■■ 5.79
PRMT5-213ENST00000553897 CCDC180Q9P1Z9 1646 aa44.59■■■■■ 4.73
PRMT5-213ENST00000553897 ZCCHC6Q5VYS8 1495 aaKnown RBP43.11■■■■■ 4.49
PRMT5-213ENST00000553897 DCAF1Q9Y4B6 1507 aa42.38■■■■■ 4.37
PRMT5-213ENST00000553897 DCAF8L2P0C7V8 631 aa42.15■■■■■ 4.34
PRMT5-213ENST00000553897 SHROOM4Q9ULL8 1493 aa42.03■■■■■ 4.32
PRMT5-213ENST00000553897 ABCC9O60706 1549 aa41.74■■■■■ 4.27
PRMT5-213ENST00000553897 MYO15BQ96JP2 1530 aa41.74■■■■■ 4.27
PRMT5-213ENST00000553897 NACADO15069 1562 aa41.4■■■■■ 4.22
PRMT5-213ENST00000553897 SCRIBQ14160 1630 aa41.01■■■■■ 4.16
PRMT5-213ENST00000553897 RB1CC1Q8TDY2 1594 aa40.98■■■■■ 4.15
PRMT5-213ENST00000553897 SUPT5HO00267 1087 aaKnown RBP40.62■■■■■ 4.09
PRMT5-213ENST00000553897 UNC13AQ9UPW8 1703 aa40.17■■■■■ 4.02
PRMT5-213ENST00000553897 RSF1Q96T23 1441 aaPredicted RBP39.85■■■■□ 3.97
PRMT5-213ENST00000553897 CECR2Q9BXF3 1484 aa39.74■■■■□ 3.95
PRMT5-213ENST00000553897 BICRAQ9NZM4 1560 aa39.67■■■■□ 3.94
PRMT5-213ENST00000553897 MROH2BQ7Z745 1585 aa39.58■■■■□ 3.93
PRMT5-213ENST00000553897 BAZ1AQ9NRL2 1556 aaPredicted RBP39.57■■■■□ 3.92
PRMT5-213ENST00000553897 PABPN1Q86U42 306 aaKnown RBP eCLIP39.39■■■■□ 3.9
PRMT5-213ENST00000553897 SMARCA4P51532 1647 aa39.34■■■■□ 3.89
PRMT5-213ENST00000553897 WIZO95785 1651 aa39.31■■■■□ 3.88
PRMT5-213ENST00000553897 CHIC1Q5VXU3 224 aa39.05■■■■□ 3.84
PRMT5-213ENST00000553897 TOP2AP11388 1531 aaKnown RBP38.93■■■■□ 3.82
PRMT5-213ENST00000553897 PEG3Q9GZU2 1588 aa38.82■■■■□ 3.8
PRMT5-213ENST00000553897 SMARCA2P51531 1590 aa38.6■■■■□ 3.77
PRMT5-213ENST00000553897 ATAD2BQ9ULI0 1458 aa38.55■■■■□ 3.76
PRMT5-213ENST00000553897 CCDC88BA6NC98 1476 aa38.49■■■■□ 3.75
PRMT5-213ENST00000553897 EIF4G1Q04637 1599 aaKnown RBP38.47■■■■□ 3.75
PRMT5-213ENST00000553897 BAZ1BQ9UIG0 1483 aaKnown RBP38.4■■■■□ 3.74
PRMT5-213ENST00000553897 HMGXB3Q12766 1538 aa38.19■■■■□ 3.7
PRMT5-213ENST00000553897 TRIM41Q8WV44 630 aa38.18■■■■□ 3.7
PRMT5-213ENST00000553897 NCAPD3P42695 1498 aa38.15■■■■□ 3.7
PRMT5-213ENST00000553897 ABCC8Q09428 1581 aa37.82■■■■□ 3.64
PRMT5-213ENST00000553897 CC2D2AQ9P2K1 1620 aa37.81■■■■□ 3.64
PRMT5-213ENST00000553897 LOC105371045A0A1W2PR82 267 aa37.55■■■■□ 3.6
PRMT5-213ENST00000553897 WRNQ14191 1432 aaPredicted RBP eCLIP37.54■■■■□ 3.6
PRMT5-213ENST00000553897 FAM9AQ8IZU1 332 aaPredicted RBP37.47■■■■□ 3.59
PRMT5-213ENST00000553897 CFTRP13569 1480 aa37.41■■■■□ 3.58
PRMT5-213ENST00000553897 PRDM2Q13029 1718 aa37.39■■■■□ 3.58
PRMT5-213ENST00000553897 SYNJ1O43426 1573 aa37.37■■■■□ 3.57
PRMT5-213ENST00000553897 EEA1Q15075 1411 aa37.25■■■■□ 3.55
PRMT5-213ENST00000553897 TOP2BQ02880 1626 aa37.22■■■■□ 3.55
PRMT5-213ENST00000553897 CADPSQ9ULU8 1353 aa37.2■■■■□ 3.55
PRMT5-213ENST00000553897 BIVM-ERCC5R4GMW8 1640 aa37.2■■■■□ 3.55
PRMT5-213ENST00000553897 SOGA1O94964 1423 aa37.14■■■■□ 3.54
PRMT5-213ENST00000553897 CUX1P39880 1505 aa37■■■■□ 3.51
PRMT5-213ENST00000553897 RUSC2Q8N2Y8 1516 aa36.97■■■■□ 3.51
PRMT5-213ENST00000553897 CSRNP3Q8WYN3 585 aa36.93■■■■□ 3.5
PRMT5-213ENST00000553897 EHMT2Q96KQ7 1210 aa36.92■■■■□ 3.5
PRMT5-213ENST00000553897 LAMC3Q9Y6N6 1575 aa36.86■■■■□ 3.49
PRMT5-213ENST00000553897 FANCD2Q9BXW9 1451 aa36.83■■■■□ 3.49
PRMT5-213ENST00000553897 KIF21BO75037 1637 aa36.75■■■■□ 3.47
PRMT5-213ENST00000553897 NESP48681 1621 aa36.74■■■■□ 3.47
PRMT5-213ENST00000553897 GOLGA3Q08378 1498 aa36.74■■■■□ 3.47
PRMT5-213ENST00000553897 CEP164Q9UPV0 1460 aa36.71■■■■□ 3.47
PRMT5-213ENST00000553897 TNIKQ9UKE5 1360 aa36.66■■■■□ 3.46
PRMT5-213ENST00000553897 DNMBPQ6XZF7 1577 aa36.6■■■■□ 3.45
PRMT5-213ENST00000553897 KIF27Q86VH2 1401 aa36.57■■■■□ 3.45
PRMT5-213ENST00000553897 DNAJC5BQ9UF47 199 aa36.57■■■■□ 3.44
PRMT5-213ENST00000553897 FGD5Q6ZNL6 1462 aa36.55■■■■□ 3.44
PRMT5-213ENST00000553897 PDS5BQ9NTI5 1447 aa36.54■■■■□ 3.44
PRMT5-213ENST00000553897 UBTFP17480 764 aaKnown RBP36.52■■■■□ 3.44
PRMT5-213ENST00000553897 CEP162Q5TB80 1403 aa36.5■■■■□ 3.43
PRMT5-213ENST00000553897 TOPBP1Q92547 1522 aa36.47■■■■□ 3.43
PRMT5-213ENST00000553897 ERICH3Q5RHP9 1530 aa36.43■■■■□ 3.42
PRMT5-213ENST00000553897 RAPGEF2Q9Y4G8 1499 aa36.4■■■■□ 3.42
PRMT5-213ENST00000553897 CUX2O14529 1486 aa36.38■■■■□ 3.42
PRMT5-213ENST00000553897 PRXQ9BXM0 1461 aa36.38■■■■□ 3.42
PRMT5-213ENST00000553897 KIF21AQ7Z4S6 1674 aa36.38■■■■□ 3.41
PRMT5-213ENST00000553897 URB2Q14146 1524 aaKnown RBP36.33■■■■□ 3.41
PRMT5-213ENST00000553897 POLA1P09884 1462 aaPredicted RBP36.3■■■■□ 3.4
PRMT5-213ENST00000553897 PCGF6Q9BYE7 350 aa36.26■■■■□ 3.39
PRMT5-213ENST00000553897 ABCA10Q8WWZ4 1543 aa36.24■■■■□ 3.39
PRMT5-213ENST00000553897 TRIM26Q12899 539 aaPredicted RBP36.22■■■■□ 3.39
PRMT5-213ENST00000553897 RAD54L2Q9Y4B4 1467 aa36.17■■■■□ 3.38
PRMT5-213ENST00000553897 CLIP1P30622 1438 aa36.14■■■■□ 3.38
PRMT5-213ENST00000553897 IGF1RP08069 1367 aa36.14■■■■□ 3.38
PRMT5-213ENST00000553897 WDR97A6NE52 1622 aa36.13■■■■□ 3.37
PRMT5-213ENST00000553897 MRC2Q9UBG0 1479 aa36.06■■■■□ 3.36
PRMT5-213ENST00000553897 CARMIL1Q5VZK9 1371 aa36■■■■□ 3.35
PRMT5-213ENST00000553897 CUL7Q14999 1698 aa35.96■■■■□ 3.35
PRMT5-213ENST00000553897 ABCA5Q8WWZ7 1642 aa35.94■■■■□ 3.34
PRMT5-213ENST00000553897 TARBP1Q13395 1621 aaKnown RBP35.9■■■■□ 3.34
PRMT5-213ENST00000553897 VPS8Q8N3P4 1428 aa35.88■■■■□ 3.33
PRMT5-213ENST00000553897 WDR62O43379 1518 aa35.85■■■■□ 3.33
PRMT5-213ENST00000553897 GAPVD1Q14C86 1478 aa35.82■■■■□ 3.32
PRMT5-213ENST00000553897 ERCC6Q03468 1493 aa35.8■■■■□ 3.32
PRMT5-213ENST00000553897 RANGAP1P46060 587 aaPredicted RBP35.78■■■■□ 3.32
PRMT5-213ENST00000553897 TDRD9Q8NDG6 1382 aaKnown RBP35.78■■■■□ 3.32
PRMT5-213ENST00000553897 PPARGC1BQ86YN6 1023 aaKnown RBP35.77■■■■□ 3.32
PRMT5-213ENST00000553897 ARAP1Q96P48 1450 aa35.73■■■■□ 3.31
PRMT5-213ENST00000553897 IFT140Q96RY7 1462 aa35.67■■■■□ 3.3
PRMT5-213ENST00000553897 THOC2Q8NI27 1593 aaKnown RBP35.67■■■■□ 3.3
PRMT5-213ENST00000553897 PBRM1Q86U86 1689 aa35.66■■■■□ 3.3
PRMT5-213ENST00000553897 ARHGAP35Q9NRY4 1499 aa35.64■■■■□ 3.3
PRMT5-213ENST00000553897 CTTNBP2Q8WZ74 1663 aa35.64■■■■□ 3.3
PRMT5-213ENST00000553897 APLP2Q06481 763 aa35.57■■■■□ 3.28
PRMT5-213ENST00000553897 HRCP23327 699 aa35.55■■■■□ 3.28
PRMT5-213ENST00000553897 GRIN2BQ13224 1484 aa35.5■■■■□ 3.27
PRMT5-213ENST00000553897 AQRO60306 1485 aaKnown RBP eCLIP35.49■■■■□ 3.272e-7■■■■■ 38.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms