RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 NISCHQ9Y2I1 1504 aa45.59■■■■■ 4.89
FOXA2-201ENST00000377115 SHROOM4Q9ULL8 1493 aa39.72■■■■□ 3.95
FOXA2-201ENST00000377115 SUPT5HO00267 1087 aaKnown RBP39.27■■■■□ 3.88
FOXA2-201ENST00000377115 ZCCHC6Q5VYS8 1495 aaKnown RBP38.72■■■■□ 3.79
FOXA2-201ENST00000377115 MYO15BQ96JP2 1530 aa38.64■■■■□ 3.78
FOXA2-201ENST00000377115 HRCP23327 699 aa38.64■■■■□ 3.78
FOXA2-201ENST00000377115 CHIC1Q5VXU3 224 aa38.47■■■■□ 3.75
FOXA2-201ENST00000377115 CCDC180Q9P1Z9 1646 aa38.27■■■■□ 3.72
FOXA2-201ENST00000377115 PCGF6Q9BYE7 350 aa38.17■■■■□ 3.7
FOXA2-201ENST00000377115 PPARGC1BQ86YN6 1023 aaKnown RBP37.88■■■■□ 3.65
FOXA2-201ENST00000377115 DCAF8L2P0C7V8 631 aa37.81■■■■□ 3.64
FOXA2-201ENST00000377115 DCAF1Q9Y4B6 1507 aa37.63■■■■□ 3.61
FOXA2-201ENST00000377115 LOC105371045A0A1W2PR82 267 aa37.48■■■■□ 3.59
FOXA2-201ENST00000377115 TRIM26Q12899 539 aaPredicted RBP37.12■■■■□ 3.53
FOXA2-201ENST00000377115 ABCC9O60706 1549 aa36.71■■■■□ 3.47
FOXA2-201ENST00000377115 ZEB1P37275 1124 aaPredicted RBP36.57■■■■□ 3.44
FOXA2-201ENST00000377115 RSF1Q96T23 1441 aaPredicted RBP36.44■■■■□ 3.42
FOXA2-201ENST00000377115 TRIM41Q8WV44 630 aa36.41■■■■□ 3.42
FOXA2-201ENST00000377115 FAM9AQ8IZU1 332 aaPredicted RBP36.3■■■■□ 3.4
FOXA2-201ENST00000377115 RB1CC1Q8TDY2 1594 aa36.25■■■■□ 3.39
FOXA2-201ENST00000377115 SCRIBQ14160 1630 aa36.25■■■■□ 3.39
FOXA2-201ENST00000377115 SCAF1Q9H7N4 1312 aaKnown RBP36.18■■■■□ 3.38
FOXA2-201ENST00000377115 PELP1Q8IZL8 1130 aaKnown RBP36.16■■■■□ 3.38
FOXA2-201ENST00000377115 EHMT2Q96KQ7 1210 aa36.1■■■■□ 3.37
FOXA2-201ENST00000377115 CECR2Q9BXF3 1484 aa35.65■■■■□ 3.3
FOXA2-201ENST00000377115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.63■■■■□ 3.29
FOXA2-201ENST00000377115 MROH2BQ7Z745 1585 aa35.57■■■■□ 3.28
FOXA2-201ENST00000377115 CCER1Q8TC90 406 aaPredicted RBP35.51■■■■□ 3.28
FOXA2-201ENST00000377115 ACIN1Q9UKV3 1341 aaKnown RBP35.49■■■■□ 3.27
FOXA2-201ENST00000377115 WIZO95785 1651 aa35.45■■■■□ 3.27
FOXA2-201ENST00000377115 NEUROD1Q13562 356 aa35.44■■■■□ 3.26
FOXA2-201ENST00000377115 EIF4G1Q04637 1599 aaKnown RBP35.25■■■■□ 3.23
FOXA2-201ENST00000377115 DIEXFQ68CQ4 756 aaKnown RBP35.25■■■■□ 3.23
FOXA2-201ENST00000377115 NACADO15069 1562 aa35.22■■■■□ 3.23
FOXA2-201ENST00000377115 BAZ1AQ9NRL2 1556 aaPredicted RBP35.2■■■■□ 3.22
FOXA2-201ENST00000377115 GTF3C3Q9Y5Q9 886 aa35.15■■■■□ 3.22
FOXA2-201ENST00000377115 TTBK1Q5TCY1 1321 aaPredicted RBP35.14■■■■□ 3.22
FOXA2-201ENST00000377115 CENPBP07199 599 aaPredicted RBP35.1■■■■□ 3.21
FOXA2-201ENST00000377115 WRNQ14191 1432 aaPredicted RBP eCLIP35.05■■■■□ 3.2
FOXA2-201ENST00000377115 ABCC8Q09428 1581 aa35■■■■□ 3.19
FOXA2-201ENST00000377115 CCDC88BA6NC98 1476 aa34.97■■■■□ 3.19
FOXA2-201ENST00000377115 CEP162Q5TB80 1403 aa34.97■■■■□ 3.19
FOXA2-201ENST00000377115 SOGA1O94964 1423 aa34.8■■■■□ 3.16
FOXA2-201ENST00000377115 TOP2AP11388 1531 aaKnown RBP34.78■■■■□ 3.16
FOXA2-201ENST00000377115 TNIKQ9UKE5 1360 aa34.78■■■■□ 3.16
FOXA2-201ENST00000377115 ZNF316A6NFI3 1004 aaPredicted RBP34.74■■■■□ 3.15
FOXA2-201ENST00000377115 SMARCA2P51531 1590 aa34.67■■■■□ 3.14
FOXA2-201ENST00000377115 RUSC2Q8N2Y8 1516 aa34.62■■■■□ 3.13
FOXA2-201ENST00000377115 UBTFP17480 764 aaKnown RBP34.6■■■■□ 3.13
FOXA2-201ENST00000377115 CSRNP3Q8WYN3 585 aa34.59■■■■□ 3.13
FOXA2-201ENST00000377115 YTHDC1Q96MU7 727 aaKnown RBP34.59■■■■□ 3.13
FOXA2-201ENST00000377115 SMARCA4P51532 1647 aa34.57■■■■□ 3.13
FOXA2-201ENST00000377115 EEA1Q15075 1411 aa34.54■■■■□ 3.12
FOXA2-201ENST00000377115 MYT1Q01538 1121 aa34.5■■■■□ 3.11
FOXA2-201ENST00000377115 GOLGA3Q08378 1498 aa34.45■■■■□ 3.11
FOXA2-201ENST00000377115 MIER1Q8N108 512 aa34.43■■■■□ 3.1
FOXA2-201ENST00000377115 HNRNPUL2Q1KMD3 747 aaKnown RBP34.37■■■■□ 3.09
FOXA2-201ENST00000377115 UNC13AQ9UPW8 1703 aa34.16■■■■□ 3.06
FOXA2-201ENST00000377115 CEP164Q9UPV0 1460 aa34.15■■■■□ 3.06
FOXA2-201ENST00000377115 CLIP1P30622 1438 aa34.13■■■■□ 3.05
FOXA2-201ENST00000377115 KIF21BO75037 1637 aa34.1■■■■□ 3.05
FOXA2-201ENST00000377115 VPS8Q8N3P4 1428 aa34.06■■■■□ 3.04
FOXA2-201ENST00000377115 SYNJ1O43426 1573 aa34.05■■■■□ 3.04
FOXA2-201ENST00000377115 APLP2Q06481 763 aa33.93■■■■□ 3.02
FOXA2-201ENST00000377115 RAPGEF2Q9Y4G8 1499 aa33.9■■■■□ 3.02
FOXA2-201ENST00000377115 BAZ1BQ9UIG0 1483 aaKnown RBP33.87■■■■□ 3.01
FOXA2-201ENST00000377115 RANGAP1P46060 587 aaPredicted RBP33.87■■■■□ 3.01
FOXA2-201ENST00000377115 PEG3Q9GZU2 1588 aa33.77■■■■□ 3
FOXA2-201ENST00000377115 PABPN1Q86U42 306 aaKnown RBP eCLIP33.76■■■□□ 2.99
FOXA2-201ENST00000377115 DHX57Q6P158 1386 aaKnown RBP33.74■■■□□ 2.99
FOXA2-201ENST00000377115 CLSPNQ9HAW4 1339 aa33.68■■■□□ 2.98
FOXA2-201ENST00000377115 BICRAQ9NZM4 1560 aa33.66■■■□□ 2.98
FOXA2-201ENST00000377115 SUPT16HQ9Y5B9 1047 aaKnown RBP33.65■■■□□ 2.98
FOXA2-201ENST00000377115 KANK4Q5T7N3 995 aaPredicted RBP33.51■■■□□ 2.96
FOXA2-201ENST00000377115 ARAP1Q96P48 1450 aa33.51■■■□□ 2.95
FOXA2-201ENST00000377115 ATAD2BQ9ULI0 1458 aa33.5■■■□□ 2.95
FOXA2-201ENST00000377115 TOP2BQ02880 1626 aa33.48■■■□□ 2.95
FOXA2-201ENST00000377115 ERICH3Q5RHP9 1530 aa33.4■■■□□ 2.94
FOXA2-201ENST00000377115 PRXQ9BXM0 1461 aa33.38■■■□□ 2.93
FOXA2-201ENST00000377115 RRBP1Q9P2E9 1410 aaKnown RBP33.37■■■□□ 2.93
FOXA2-201ENST00000377115 BIVM-ERCC5R4GMW8 1640 aa33.32■■■□□ 2.92
FOXA2-201ENST00000377115 TSHZ2Q9NRE2 1034 aa33.32■■■□□ 2.92
FOXA2-201ENST00000377115 CUX2O14529 1486 aa33.28■■■□□ 2.92
FOXA2-201ENST00000377115 KCNH8Q96L42 1107 aa33.23■■■□□ 2.91
FOXA2-201ENST00000377115 CCNB3Q8WWL7 1395 aa33.22■■■□□ 2.91
FOXA2-201ENST00000377115 ITGAEP38570 1179 aa33.19■■■□□ 2.9
FOXA2-201ENST00000377115 ARHGAP35Q9NRY4 1499 aa33.08■■■□□ 2.89
FOXA2-201ENST00000377115 MAPKBP1O60336 1514 aa33.07■■■□□ 2.89
FOXA2-201ENST00000377115 RAB3GAP2Q9H2M9 1393 aa33.07■■■□□ 2.88
FOXA2-201ENST00000377115 CUX1P39880 1505 aa33.04■■■□□ 2.88
FOXA2-201ENST00000377115 ANP32EQ9BTT0 268 aa33.03■■■□□ 2.88
FOXA2-201ENST00000377115 KIF27Q86VH2 1401 aa33.03■■■□□ 2.88
FOXA2-201ENST00000377115 BCANQ96GW7 911 aa33.01■■■□□ 2.87
FOXA2-201ENST00000377115 DDX10Q13206 875 aaKnown RBP32.9■■■□□ 2.86
FOXA2-201ENST00000377115 FKBP8Q14318 412 aa32.89■■■□□ 2.86
FOXA2-201ENST00000377115 WDR97A6NE52 1622 aa32.89■■■□□ 2.86
FOXA2-201ENST00000377115 SETD5Q9C0A6 1442 aa32.84■■■□□ 2.85
FOXA2-201ENST00000377115 SIN3AQ96ST3 1273 aa32.83■■■□□ 2.85
FOXA2-201ENST00000377115 TIAM1Q13009 1591 aa32.83■■■□□ 2.85
FOXA2-201ENST00000377115 PPP1R15AO75807 674 aaPredicted RBP32.75■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms