Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPARCP09486 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SPARCP09486 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.56■□□□□ 0.88
SPARCP09486 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.56■□□□□ 0.88
SPARCP09486 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPARCP09486 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SPARCP09486 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.56■□□□□ 0.88
SPARCP09486 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SPARCP09486 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.56■□□□□ 0.88
SPARCP09486 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.55■□□□□ 0.88
SPARCP09486 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPARCP09486 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
SPARCP09486 RARRES2P2-201ENST00000394842 485 ntBASIC20.55■□□□□ 0.88
SPARCP09486 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPARCP09486 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPARCP09486 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPARCP09486 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPARCP09486 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.55■□□□□ 0.88
SPARCP09486 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.55■□□□□ 0.88
SPARCP09486 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPARCP09486 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPARCP09486 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SPARCP09486 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPARCP09486 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPARCP09486 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.54■□□□□ 0.88
SPARCP09486 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.54■□□□□ 0.88
SPARCP09486 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.54■□□□□ 0.88
SPARCP09486 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPARCP09486 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.54■□□□□ 0.88
SPARCP09486 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPARCP09486 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPARCP09486 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPARCP09486 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPARCP09486 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPARCP09486 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.53■□□□□ 0.88
SPARCP09486 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SPARCP09486 MIR6765-201ENST00000614092 87 ntBASIC20.53■□□□□ 0.88
SPARCP09486 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPARCP09486 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPARCP09486 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPARCP09486 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPARCP09486 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPARCP09486 DUX4L9-201ENST00000449051 1259 ntBASIC20.52■□□□□ 0.88
SPARCP09486 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPARCP09486 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPARCP09486 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SPARCP09486 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPARCP09486 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPARCP09486 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.87
SPARCP09486 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
SPARCP09486 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SPARCP09486 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPARCP09486 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SPARCP09486 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPARCP09486 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SPARCP09486 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SPARCP09486 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPARCP09486 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPARCP09486 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.51■□□□□ 0.87
SPARCP09486 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPARCP09486 HSD17B1P1-201ENST00000590052 955 ntBASIC20.51■□□□□ 0.87
SPARCP09486 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPARCP09486 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.51■□□□□ 0.87
SPARCP09486 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.51■□□□□ 0.87
SPARCP09486 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPARCP09486 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.51■□□□□ 0.87
SPARCP09486 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPARCP09486 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SPARCP09486 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPARCP09486 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPARCP09486 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.5■□□□□ 0.87
SPARCP09486 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.5■□□□□ 0.87
SPARCP09486 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.5■□□□□ 0.87
SPARCP09486 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPARCP09486 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.5■□□□□ 0.87
SPARCP09486 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.5■□□□□ 0.87
SPARCP09486 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.5■□□□□ 0.87
SPARCP09486 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPARCP09486 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SPARCP09486 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SPARCP09486 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
SPARCP09486 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SPARCP09486 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.5■□□□□ 0.87
SPARCP09486 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPARCP09486 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.49■□□□□ 0.87
SPARCP09486 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.49■□□□□ 0.87
SPARCP09486 AC087393.1-201ENST00000582896 145 ntBASIC20.49■□□□□ 0.87
SPARCP09486 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPARCP09486 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPARCP09486 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SPARCP09486 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPARCP09486 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SPARCP09486 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPARCP09486 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.48■□□□□ 0.87
SPARCP09486 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.48■□□□□ 0.87
SPARCP09486 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPARCP09486 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SPARCP09486 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.48■□□□□ 0.87
SPARCP09486 U85056.1-201ENST00000616429 682 ntBASIC20.48■□□□□ 0.87
SPARCP09486 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms