RNA–Protein interactions for RNA: ENST00000263604.5

KCNT1-201, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNT1, Length 5,245 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-201ENST00000263604 DCAF8L2P0C7V8 631 aa37.72■■■■□ 3.63
KCNT1-201ENST00000263604 NISCHQ9Y2I1 1504 aa36.84■■■■□ 3.49
KCNT1-201ENST00000263604 SUPT5HO00267 1087 aaKnown RBP35.76■■■■□ 3.31
KCNT1-201ENST00000263604 SHROOM4Q9ULL8 1493 aa35.2■■■■□ 3.23
KCNT1-201ENST00000263604 EHMT2Q96KQ7 1210 aa34.23■■■■□ 3.07
KCNT1-201ENST00000263604 APLP2Q06481 763 aa33.97■■■■□ 3.03
KCNT1-201ENST00000263604 FAM9AQ8IZU1 332 aaPredicted RBP33.64■■■□□ 2.98
KCNT1-201ENST00000263604 PELP1Q8IZL8 1130 aaKnown RBP33.3■■■□□ 2.92
KCNT1-201ENST00000263604 TRIM41Q8WV44 630 aa33.28■■■□□ 2.92
KCNT1-201ENST00000263604 PCGF6Q9BYE7 350 aa33.1■■■□□ 2.89
KCNT1-201ENST00000263604 TTBK1Q5TCY1 1321 aaPredicted RBP33.08■■■□□ 2.89
KCNT1-201ENST00000263604 RANGAP1P46060 587 aaPredicted RBP32.92■■■□□ 2.86
KCNT1-201ENST00000263604 UBTFP17480 764 aaKnown RBP32.81■■■□□ 2.84
KCNT1-201ENST00000263604 ZEB1P37275 1124 aaPredicted RBP32.78■■■□□ 2.84
KCNT1-201ENST00000263604 ATP1B4Q9UN42 357 aaPredicted RBP32.71■■■□□ 2.83
KCNT1-201ENST00000263604 CCER1Q8TC90 406 aaPredicted RBP32.62■■■□□ 2.81
KCNT1-201ENST00000263604 CENPBP07199 599 aaPredicted RBP32.36■■■□□ 2.77
KCNT1-201ENST00000263604 TRIM26Q12899 539 aaPredicted RBP31.98■■■□□ 2.71
KCNT1-201ENST00000263604 PPARGC1BQ86YN6 1023 aaKnown RBP31.93■■■□□ 2.7
KCNT1-201ENST00000263604 CHIC1Q5VXU3 224 aa31.9■■■□□ 2.7
KCNT1-201ENST00000263604 NEFLP07196 543 aa31.7■■■□□ 2.66
KCNT1-201ENST00000263604 ERICH6Q7L0X2 663 aa31.69■■■□□ 2.66
KCNT1-201ENST00000263604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.68■■■□□ 2.66
KCNT1-201ENST00000263604 HNRNPUL2Q1KMD3 747 aaKnown RBP31.68■■■□□ 2.66
KCNT1-201ENST00000263604 LOC105371045A0A1W2PR82 267 aa31.68■■■□□ 2.66
KCNT1-201ENST00000263604 ABCC9O60706 1549 aa31.64■■■□□ 2.66
KCNT1-201ENST00000263604 ITGAEP38570 1179 aa31.57■■■□□ 2.64
KCNT1-201ENST00000263604 YTHDC1Q96MU7 727 aaKnown RBP31.53■■■□□ 2.64
KCNT1-201ENST00000263604 MYT1LQ9UL68 1186 aa31.47■■■□□ 2.63
KCNT1-201ENST00000263604 PABPN1Q86U42 306 aaKnown RBP eCLIP31.43■■■□□ 2.62
KCNT1-201ENST00000263604 HRCP23327 699 aa31.39■■■□□ 2.62
KCNT1-201ENST00000263604 POLR3GLQ9BT43 218 aa31.13■■■□□ 2.57
KCNT1-201ENST00000263604 FAM50AQ14320 339 aaKnown RBP30.92■■■□□ 2.54
KCNT1-201ENST00000263604 TRIM52Q96A61 297 aa30.72■■■□□ 2.51
KCNT1-201ENST00000263604 CNGB1Q14028 1251 aaPredicted RBP30.7■■■□□ 2.5
KCNT1-201ENST00000263604 DIEXFQ68CQ4 756 aaKnown RBP30.64■■■□□ 2.5
KCNT1-201ENST00000263604 DAXXQ9UER7 740 aaPredicted RBP30.63■■■□□ 2.49
KCNT1-201ENST00000263604 CSRNP3Q8WYN3 585 aa30.59■■■□□ 2.49
KCNT1-201ENST00000263604 SLC4A1APQ9BWU0 796 aaKnown RBP30.59■■■□□ 2.49
KCNT1-201ENST00000263604 FBLN2P98095 1184 aa30.57■■■□□ 2.48
KCNT1-201ENST00000263604 MYT1Q01538 1121 aa30.56■■■□□ 2.48
KCNT1-201ENST00000263604 NEUROD1Q13562 356 aa30.5■■■□□ 2.47
KCNT1-201ENST00000263604 ZCCHC6Q5VYS8 1495 aaKnown RBP30.49■■■□□ 2.47
KCNT1-201ENST00000263604 SCRIBQ14160 1630 aa30.44■■■□□ 2.46
KCNT1-201ENST00000263604 P3H3Q8IVL6 736 aa30.29■■■□□ 2.44
KCNT1-201ENST00000263604 ZNF326Q5BKZ1 582 aaKnown RBP30.24■■■□□ 2.43
KCNT1-201ENST00000263604 ANP32CO43423 234 aa30.2■■■□□ 2.43
KCNT1-201ENST00000263604 CDK11AQ9UQ88 783 aaPredicted RBP30.2■■■□□ 2.43
KCNT1-201ENST00000263604 CCDC180Q9P1Z9 1646 aa30.19■■■□□ 2.42
KCNT1-201ENST00000263604 CLSPNQ9HAW4 1339 aa30.12■■■□□ 2.41
KCNT1-201ENST00000263604 ZNF316A6NFI3 1004 aaPredicted RBP30.09■■■□□ 2.41
KCNT1-201ENST00000263604 ARID3CA6NKF2 412 aa30.09■■■□□ 2.41
KCNT1-201ENST00000263604 ZNF777Q9ULD5 760 aaPredicted RBP29.99■■■□□ 2.39
KCNT1-201ENST00000263604 RTL5Q5HYW3 569 aaPredicted RBP29.82■■■□□ 2.36
KCNT1-201ENST00000263604 RB1CC1Q8TDY2 1594 aa29.77■■■□□ 2.36
KCNT1-201ENST00000263604 DCAF1Q9Y4B6 1507 aa29.75■■■□□ 2.35
KCNT1-201ENST00000263604 BCANQ96GW7 911 aa29.74■■■□□ 2.35
KCNT1-201ENST00000263604 NEFMP07197 916 aa29.73■■■□□ 2.35
KCNT1-201ENST00000263604 GTF3C3Q9Y5Q9 886 aa29.72■■■□□ 2.35
KCNT1-201ENST00000263604 ZBTB47Q9UFB7 747 aaPredicted RBP29.71■■■□□ 2.35
KCNT1-201ENST00000263604 NPM1P06748 294 aaKnown RBP eCLIP29.69■■■□□ 2.34
KCNT1-201ENST00000263604 TONSLQ96HA7 1378 aa29.69■■■□□ 2.34
KCNT1-201ENST00000263604 ESF1Q9H501 851 aaKnown RBP29.63■■■□□ 2.33
KCNT1-201ENST00000263604 CANXP27824 592 aaKnown RBP29.6■■■□□ 2.33
KCNT1-201ENST00000263604 NACADO15069 1562 aa29.52■■■□□ 2.32
KCNT1-201ENST00000263604 RSF1Q96T23 1441 aaPredicted RBP29.52■■■□□ 2.32
KCNT1-201ENST00000263604 EEA1Q15075 1411 aa29.49■■■□□ 2.31
KCNT1-201ENST00000263604 MTUS2Q5JR59 1369 aa29.49■■■□□ 2.31
KCNT1-201ENST00000263604 CHMP7Q8WUX9 453 aaPredicted RBP29.48■■■□□ 2.31
KCNT1-201ENST00000263604 CLIP1P30622 1438 aa29.47■■■□□ 2.31
KCNT1-201ENST00000263604 TSPY4P0CV99 314 aa29.46■■■□□ 2.31
KCNT1-201ENST00000263604 TSPY10P0CW01 314 aa29.46■■■□□ 2.31
KCNT1-201ENST00000263604 CHGAP10645 457 aaKnown RBP29.46■■■□□ 2.31
KCNT1-201ENST00000263604 SLC24A1O60721 1099 aa29.45■■■□□ 2.31
KCNT1-201ENST00000263604 STAG3Q9UJ98 1225 aa29.45■■■□□ 2.3
KCNT1-201ENST00000263604 CHIC2Q9UKJ5 165 aa29.43■■■□□ 2.3
KCNT1-201ENST00000263604 ACIN1Q9UKV3 1341 aaKnown RBP29.43■■■□□ 2.3
KCNT1-201ENST00000263604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.3■■■□□ 2.28
KCNT1-201ENST00000263604 BAZ1BQ9UIG0 1483 aaKnown RBP29.3■■■□□ 2.28
KCNT1-201ENST00000263604 GOLGA3Q08378 1498 aa29.29■■■□□ 2.28
KCNT1-201ENST00000263604 DDX10Q13206 875 aaKnown RBP29.29■■■□□ 2.28
KCNT1-201ENST00000263604 WRNQ14191 1432 aaPredicted RBP eCLIP29.29■■■□□ 2.28
KCNT1-201ENST00000263604 HNRNPUQ00839 825 aaKnown RBP eCLIP29.2■■■□□ 2.26
KCNT1-201ENST00000263604 BCL11AQ9H165 835 aa29.18■■■□□ 2.26
KCNT1-201ENST00000263604 CEP162Q5TB80 1403 aa29.16■■■□□ 2.26
KCNT1-201ENST00000263604 KIF27Q86VH2 1401 aa29.16■■■□□ 2.26
KCNT1-201ENST00000263604 PLEKHD1A6NEE1 506 aa29.14■■■□□ 2.25
KCNT1-201ENST00000263604 FAM9BQ8IZU0 186 aa29.13■■■□□ 2.25
KCNT1-201ENST00000263604 ANP32AP39687 249 aaKnown RBP29.13■■■□□ 2.25
KCNT1-201ENST00000263604 TMC1Q8TDI8 760 aa29.11■■■□□ 2.25
KCNT1-201ENST00000263604 KDM2AQ9Y2K7 1162 aa29.08■■■□□ 2.25
KCNT1-201ENST00000263604 BAZ1AQ9NRL2 1556 aaPredicted RBP29.08■■■□□ 2.25
KCNT1-201ENST00000263604 FKBP8Q14318 412 aa29.05■■■□□ 2.24
KCNT1-201ENST00000263604 TNIKQ9UKE5 1360 aa29.05■■■□□ 2.24
KCNT1-201ENST00000263604 CEP164Q9UPV0 1460 aa29.04■■■□□ 2.24
KCNT1-201ENST00000263604 RRP7BPQ9NSQ0 103 aa29.04■■■□□ 2.24
KCNT1-201ENST00000263604 PLPPR3Q6T4P5 718 aa29.03■■■□□ 2.24
KCNT1-201ENST00000263604 EIF4G2P78344 907 aaKnown RBP eCLIP28.99■■■□□ 2.23
KCNT1-201ENST00000263604 KCNH8Q96L42 1107 aa28.97■■■□□ 2.23
KCNT1-201ENST00000263604 WDR43Q15061 677 aaKnown RBP eCLIP28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 369.5 ms