RNA–Protein interactions for RNA: ENST00000378154.1

CASK-201, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

TSL 5 BASIC

Gene CASK, Length 2,494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-201ENST00000378154 NISCHQ9Y2I1 1504 aa47.33■■■■■ 5.17
CASK-201ENST00000378154 SHROOM4Q9ULL8 1493 aa40.49■■■■■ 4.07
CASK-201ENST00000378154 CCDC180Q9P1Z9 1646 aa40.12■■■■■ 4.01
CASK-201ENST00000378154 ZCCHC6Q5VYS8 1495 aaKnown RBP40.01■■■■■ 4
CASK-201ENST00000378154 SUPT5HO00267 1087 aaKnown RBP39.68■■■■□ 3.94
CASK-201ENST00000378154 DCAF8L2P0C7V8 631 aa39.38■■■■□ 3.9
CASK-201ENST00000378154 DCAF1Q9Y4B6 1507 aa38.74■■■■□ 3.79
CASK-201ENST00000378154 CHIC1Q5VXU3 224 aa38.54■■■■□ 3.76
CASK-201ENST00000378154 MYO15BQ96JP2 1530 aa38.43■■■■□ 3.74
CASK-201ENST00000378154 SCRIBQ14160 1630 aa37.75■■■■□ 3.63
CASK-201ENST00000378154 ABCC9O60706 1549 aa37.73■■■■□ 3.63
CASK-201ENST00000378154 RSF1Q96T23 1441 aaPredicted RBP37.5■■■■□ 3.59
CASK-201ENST00000378154 LOC105371045A0A1W2PR82 267 aa37.48■■■■□ 3.59
CASK-201ENST00000378154 PCGF6Q9BYE7 350 aa37.35■■■■□ 3.57
CASK-201ENST00000378154 HRCP23327 699 aa37.29■■■■□ 3.56
CASK-201ENST00000378154 NACADO15069 1562 aa37.14■■■■□ 3.54
CASK-201ENST00000378154 RB1CC1Q8TDY2 1594 aa37.09■■■■□ 3.53
CASK-201ENST00000378154 CECR2Q9BXF3 1484 aa37.01■■■■□ 3.52
CASK-201ENST00000378154 TRIM41Q8WV44 630 aa36.9■■■■□ 3.5
CASK-201ENST00000378154 MROH2BQ7Z745 1585 aa36.85■■■■□ 3.49
CASK-201ENST00000378154 FAM9AQ8IZU1 332 aaPredicted RBP36.69■■■■□ 3.46
CASK-201ENST00000378154 PPARGC1BQ86YN6 1023 aaKnown RBP36.65■■■■□ 3.46
CASK-201ENST00000378154 WIZO95785 1651 aa36.63■■■■□ 3.45
CASK-201ENST00000378154 TRIM26Q12899 539 aaPredicted RBP36.57■■■■□ 3.44
CASK-201ENST00000378154 EHMT2Q96KQ7 1210 aa36.44■■■■□ 3.42
CASK-201ENST00000378154 BAZ1AQ9NRL2 1556 aaPredicted RBP36.32■■■■□ 3.41
CASK-201ENST00000378154 EIF4G1Q04637 1599 aaKnown RBP36.09■■■■□ 3.37
CASK-201ENST00000378154 UNC13AQ9UPW8 1703 aa36.04■■■■□ 3.36
CASK-201ENST00000378154 SMARCA4P51532 1647 aa36.03■■■■□ 3.36
CASK-201ENST00000378154 TOP2AP11388 1531 aaKnown RBP35.99■■■■□ 3.35
CASK-201ENST00000378154 CCDC88BA6NC98 1476 aa35.92■■■■□ 3.34
CASK-201ENST00000378154 ABCC8Q09428 1581 aa35.85■■■■□ 3.33
CASK-201ENST00000378154 SMARCA2P51531 1590 aa35.83■■■■□ 3.33
CASK-201ENST00000378154 PABPN1Q86U42 306 aaKnown RBP eCLIP35.81■■■■□ 3.32
CASK-201ENST00000378154 ZEB1P37275 1124 aaPredicted RBP35.65■■■■□ 3.3
CASK-201ENST00000378154 BICRAQ9NZM4 1560 aa35.65■■■■□ 3.3
CASK-201ENST00000378154 SOGA1O94964 1423 aa35.53■■■■□ 3.28
CASK-201ENST00000378154 RUSC2Q8N2Y8 1516 aa35.38■■■■□ 3.25
CASK-201ENST00000378154 CEP162Q5TB80 1403 aa35.3■■■■□ 3.24
CASK-201ENST00000378154 PEG3Q9GZU2 1588 aa35.29■■■■□ 3.24
CASK-201ENST00000378154 CSRNP3Q8WYN3 585 aa35.28■■■■□ 3.24
CASK-201ENST00000378154 TTBK1Q5TCY1 1321 aaPredicted RBP35.25■■■■□ 3.23
CASK-201ENST00000378154 TNIKQ9UKE5 1360 aa35.22■■■■□ 3.23
CASK-201ENST00000378154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.21■■■■□ 3.23
CASK-201ENST00000378154 WRNQ14191 1432 aaPredicted RBP eCLIP35.2■■■■□ 3.23
CASK-201ENST00000378154 EEA1Q15075 1411 aa35.18■■■■□ 3.22
CASK-201ENST00000378154 UBTFP17480 764 aaKnown RBP35.16■■■■□ 3.22
CASK-201ENST00000378154 ATAD2BQ9ULI0 1458 aa35.14■■■■□ 3.22
CASK-201ENST00000378154 CCER1Q8TC90 406 aaPredicted RBP35.05■■■■□ 3.2
CASK-201ENST00000378154 SYNJ1O43426 1573 aa35.04■■■■□ 3.2
CASK-201ENST00000378154 BAZ1BQ9UIG0 1483 aaKnown RBP35.03■■■■□ 3.2
CASK-201ENST00000378154 GOLGA3Q08378 1498 aa35■■■■□ 3.19
CASK-201ENST00000378154 CEP164Q9UPV0 1460 aa34.8■■■■□ 3.16
CASK-201ENST00000378154 KIF21BO75037 1637 aa34.72■■■■□ 3.15
CASK-201ENST00000378154 CLIP1P30622 1438 aa34.64■■■■□ 3.14
CASK-201ENST00000378154 RAPGEF2Q9Y4G8 1499 aa34.64■■■■□ 3.14
CASK-201ENST00000378154 RANGAP1P46060 587 aaPredicted RBP34.57■■■■□ 3.12
CASK-201ENST00000378154 TOP2BQ02880 1626 aa34.55■■■■□ 3.12
CASK-201ENST00000378154 VPS8Q8N3P4 1428 aa34.47■■■■□ 3.11
CASK-201ENST00000378154 NCAPD3P42695 1498 aa34.43■■■■□ 3.1
CASK-201ENST00000378154 HNRNPUL2Q1KMD3 747 aaKnown RBP34.42■■■■□ 3.1
CASK-201ENST00000378154 BIVM-ERCC5R4GMW8 1640 aa34.4■■■■□ 3.1
CASK-201ENST00000378154 SCAF1Q9H7N4 1312 aaKnown RBP34.38■■■■□ 3.09
CASK-201ENST00000378154 HMGXB3Q12766 1538 aa34.37■■■■□ 3.09
CASK-201ENST00000378154 DIEXFQ68CQ4 756 aaKnown RBP34.33■■■■□ 3.09
CASK-201ENST00000378154 APLP2Q06481 763 aa34.29■■■■□ 3.08
CASK-201ENST00000378154 CUX1P39880 1505 aa34.29■■■■□ 3.08
CASK-201ENST00000378154 PRXQ9BXM0 1461 aa34.26■■■■□ 3.07
CASK-201ENST00000378154 CFTRP13569 1480 aa34.17■■■■□ 3.06
CASK-201ENST00000378154 ERICH3Q5RHP9 1530 aa34.17■■■■□ 3.06
CASK-201ENST00000378154 ARAP1Q96P48 1450 aa34.1■■■■□ 3.05
CASK-201ENST00000378154 KIF27Q86VH2 1401 aa34.08■■■■□ 3.05
CASK-201ENST00000378154 ZNF316A6NFI3 1004 aaPredicted RBP34.08■■■■□ 3.05
CASK-201ENST00000378154 NEUROD1Q13562 356 aa34.05■■■■□ 3.04
CASK-201ENST00000378154 ACIN1Q9UKV3 1341 aaKnown RBP34.02■■■■□ 3.04
CASK-201ENST00000378154 KANK4Q5T7N3 995 aaPredicted RBP34.01■■■■□ 3.03
CASK-201ENST00000378154 ARHGAP35Q9NRY4 1499 aa33.82■■■■□ 3
CASK-201ENST00000378154 CADPSQ9ULU8 1353 aa33.81■■■■□ 3
CASK-201ENST00000378154 CUX2O14529 1486 aa33.8■■■■□ 3
CASK-201ENST00000378154 IGF1RP08069 1367 aa33.78■■■■□ 3
CASK-201ENST00000378154 PRDM2Q13029 1718 aa33.74■■■□□ 2.99
CASK-201ENST00000378154 CENPBP07199 599 aaPredicted RBP33.74■■■□□ 2.99
CASK-201ENST00000378154 DHX57Q6P158 1386 aaKnown RBP33.69■■■□□ 2.98
CASK-201ENST00000378154 FGD5Q6ZNL6 1462 aa33.67■■■□□ 2.98
CASK-201ENST00000378154 MIER1Q8N108 512 aa33.66■■■□□ 2.98
CASK-201ENST00000378154 RRBP1Q9P2E9 1410 aaKnown RBP33.66■■■□□ 2.98
CASK-201ENST00000378154 GTF3C3Q9Y5Q9 886 aa33.65■■■□□ 2.98
CASK-201ENST00000378154 CARMIL1Q5VZK9 1371 aa33.61■■■□□ 2.97
CASK-201ENST00000378154 YTHDC1Q96MU7 727 aaKnown RBP33.59■■■□□ 2.97
CASK-201ENST00000378154 CC2D2AQ9P2K1 1620 aa33.58■■■□□ 2.97
CASK-201ENST00000378154 CCNB3Q8WWL7 1395 aa33.55■■■□□ 2.96
CASK-201ENST00000378154 ITGAEP38570 1179 aa33.53■■■□□ 2.96
CASK-201ENST00000378154 CLSPNQ9HAW4 1339 aa33.53■■■□□ 2.96
CASK-201ENST00000378154 PELP1Q8IZL8 1130 aaKnown RBP33.52■■■□□ 2.96
CASK-201ENST00000378154 FANCD2Q9BXW9 1451 aa33.48■■■□□ 2.95
CASK-201ENST00000378154 P3H3Q8IVL6 736 aa33.4■■■□□ 2.94
CASK-201ENST00000378154 RAD54L2Q9Y4B4 1467 aa33.39■■■□□ 2.94
CASK-201ENST00000378154 TIAM1Q13009 1591 aa33.39■■■□□ 2.94
CASK-201ENST00000378154 NESP48681 1621 aa33.34■■■□□ 2.93
CASK-201ENST00000378154 MAP3K1Q13233 1512 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms