Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 CHD4-214ENST00000545942 1317 ntTSL 1 (best)21.9■■□□□ 1.15e-7■□□□□ 10.4
RPS3P23396 NUDC-202ENST00000435827 821 ntTSL 521.62■■□□□ 1.055e-7■□□□□ 10.4
RPS3P23396 NUDC-203ENST00000452707 816 ntTSL 321.62■■□□□ 1.055e-7■□□□□ 10.4
RPS3P23396 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.79■□□□□ 0.925e-7■□□□□ 10.4
RPS3P23396 GALE-209ENST00000467070 556 ntTSL 320.4■□□□□ 0.865e-7■□□□□ 10.4
RPS3P23396 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.35■□□□□ 0.855e-7■□□□□ 10.4
RPS3P23396 GALE-208ENST00000466250 598 ntTSL 219.77■□□□□ 0.765e-7■□□□□ 10.4
RPS3P23396 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.18■□□□□ 0.665e-7■□□□□ 10.4
RPS3P23396 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.655e-7■□□□□ 10.4
RPS3P23396 STARD10-212ENST00000538437 747 ntTSL 218.99■□□□□ 0.635e-7■□□□□ 10.4
RPS3P23396 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.575e-7■□□□□ 10.4
RPS3P23396 GALE-205ENST00000445705 792 ntTSL 218.19■□□□□ 0.55e-7■□□□□ 10.4
RPS3P23396 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.475e-7■□□□□ 10.4
RPS3P23396 GALE-213ENST00000470949 547 ntTSL 317.44■□□□□ 0.385e-7■□□□□ 10.4
RPS3P23396 RTCA-204ENST00000483474 683 ntTSL 316.88■□□□□ 0.295e-7■□□□□ 10.4
RPS3P23396 RTCA-205ENST00000498617 731 ntTSL 516.88■□□□□ 0.295e-7■□□□□ 10.4
RPS3P23396 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.295e-7■□□□□ 10.4
RPS3P23396 STARD10-217ENST00000543089 506 ntTSL 1 (best)16.86■□□□□ 0.295e-7■□□□□ 10.4
RPS3P23396 GALE-202ENST00000418277 882 ntTSL 516.81■□□□□ 0.285e-7■□□□□ 10.4
RPS3P23396 GALE-215ENST00000486382 449 ntTSL 316.61■□□□□ 0.255e-7■□□□□ 10.4
RPS3P23396 GALE-207ENST00000459934 1563 ntTSL 516.47■□□□□ 0.235e-7■□□□□ 10.4
RPS3P23396 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.225e-7■□□□□ 10.4
RPS3P23396 STARD10-204ENST00000535075 526 ntTSL 216.18■□□□□ 0.185e-7■□□□□ 10.4
RPS3P23396 SEPT9-231ENST00000590595 569 ntTSL 315.64■□□□□ 0.095e-7■□□□□ 10.4
RPS3P23396 NUTF2-204ENST00000568390 593 ntTSL 315.33■□□□□ 0.045e-7■□□□□ 10.4
RPS3P23396 GALE-210ENST00000467493 987 ntTSL 515.18■□□□□ 0.025e-7■□□□□ 10.4
RPS3P23396 TMEM39A-203ENST00000461654 588 ntTSL 415.01□□□□□ -0.015e-7■□□□□ 10.4
RPS3P23396 TMEM39A-205ENST00000468676 935 ntTSL 314.47□□□□□ -0.095e-7■□□□□ 10.4
RPS3P23396 CHD8-208ENST00000555301 918 ntTSL 214.08□□□□□ -0.165e-7■□□□□ 10.4
RPS3P23396 NUTF2-202ENST00000567105 582 ntTSL 313.98□□□□□ -0.175e-7■□□□□ 10.4
RPS3P23396 GALE-204ENST00000429356 957 ntTSL 513.01□□□□□ -0.335e-7■□□□□ 10.4
RPS3P23396 GALE-203ENST00000425913 876 ntTSL 512.99□□□□□ -0.335e-7■□□□□ 10.4
RPS3P23396 NUTF2-207ENST00000570026 400 ntTSL 212.94□□□□□ -0.345e-7■□□□□ 10.4
RPS3P23396 NUTF2-203ENST00000568233 589 ntTSL 212.58□□□□□ -0.45e-7■□□□□ 10.4
RPS3P23396 AFMID-206ENST00000587750 541 ntTSL 310.85□□□□□ -0.673e-15■□□□□ 10.4
RPS3P23396 TMEM39A-211ENST00000491685 852 ntTSL 510.69□□□□□ -0.75e-7■□□□□ 10.4
RPS3P23396 AFMID-211ENST00000589664 754 ntTSL 510.49□□□□□ -0.733e-15■□□□□ 10.4
RPS3P23396 GALE-214ENST00000481736 1801 ntTSL 210.35□□□□□ -0.755e-7■□□□□ 10.4
RPS3P23396 GTF2I-201ENST00000432143 572 ntTSL 49.5□□□□□ -0.895e-7■□□□□ 10.4
RPS3P23396 TMEM39A-207ENST00000482162 554 ntTSL 59.39□□□□□ -0.915e-7■□□□□ 10.4
RPS3P23396 TMEM39A-210ENST00000490099 868 ntTSL 39.39□□□□□ -0.915e-7■□□□□ 10.4
RPS3P23396 AFMID-203ENST00000585419 493 ntTSL 39.38□□□□□ -0.913e-15■□□□□ 10.4
RPS3P23396 TMEM39A-208ENST00000486159 826 ntTSL 39.06□□□□□ -0.965e-7■□□□□ 10.4
RPS3P23396 TMEM39A-201ENST00000319172 4369 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.965e-7■□□□□ 10.4
RPS3P23396 ACTN1-213ENST00000554508 585 ntTSL 48.45□□□□□ -1.065e-7■□□□□ 10.4
RPS3P23396 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.095e-7■□□□□ 10.4
RPS3P23396 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.125e-7■□□□□ 10.4
RPS3P23396 TMEM39A-202ENST00000438581 4393 ntTSL 1 (best)7.8□□□□□ -1.165e-7■□□□□ 10.4
RPS3P23396 ACTN1-212ENST00000554158 571 ntTSL 47.69□□□□□ -1.185e-7■□□□□ 10.4
RPS3P23396 STARD10-209ENST00000537351 426 ntTSL 36.96□□□□□ -1.35e-7■□□□□ 10.4
RPS3P23396 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.435e-7■□□□□ 10.4
RPS3P23396 TMEM39A-212ENST00000497993 590 ntTSL 35.5□□□□□ -1.535e-7■□□□□ 10.4
RPS3P23396 VIM-204ENST00000478746 757 ntTSL 216.14■□□□□ 0.171e-43■□□□□ 10.4
RPS3P23396 VIM-208ENST00000497849 634 ntTSL 215.38■□□□□ 0.051e-43■□□□□ 10.4
RPS3P23396 CHCHD10-205ENST00000523865 490 ntTSL 27.52□□□□□ -1.212e-6■□□□□ 10.4
RPS3P23396 ANO10-206ENST00000427171 746 ntTSL 516.23■□□□□ 0.196e-6■□□□□ 10.4
RPS3P23396 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.02■□□□□ -06e-6■□□□□ 10.4
RPS3P23396 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.14□□□□□ -0.156e-6■□□□□ 10.4
RPS3P23396 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.03□□□□□ -0.166e-6■□□□□ 10.4
RPS3P23396 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.98□□□□□ -0.176e-6■□□□□ 10.4
RPS3P23396 ANO10-207ENST00000428472 592 ntTSL 411.8□□□□□ -0.526e-6■□□□□ 10.4
RPS3P23396 ANO10-201ENST00000292246 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.826e-6■□□□□ 10.4
RPS3P23396 RPS11-206ENST00000600027 944 ntTSL 511.76□□□□□ -0.533e-17■□□□□ 10.4
RPS3P23396 RPS11-204ENST00000599167 1133 ntTSL 511.76□□□□□ -0.533e-17■□□□□ 10.4
RPS3P23396 RPS11-201ENST00000270625 614 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.973e-17■□□□□ 10.4
RPS3P23396 RPS11-209ENST00000602252 751 ntTSL 27.89□□□□□ -1.153e-17■□□□□ 10.4
RPS3P23396 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.89□□□□□ -1.153e-17■□□□□ 10.4
RPS3P23396 RPS11-208ENST00000601306 547 ntTSL 37.53□□□□□ -1.23e-17■□□□□ 10.4
RPS3P23396 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.55□□□□□ -1.363e-17■□□□□ 10.4
RPS3P23396 APOC4-APOC2-201ENST00000585685 1829 ntTSL 516.33■□□□□ 0.216e-7■□□□□ 10.4
RPS3P23396 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.66e-7■□□□□ 10.4
RPS3P23396 APOC4-APOC2-202ENST00000589057 680 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.716e-7■□□□□ 10.4
RPS3P23396 APOC2-204ENST00000591597 447 ntTSL 5 BASIC7.77□□□□□ -1.176e-7■□□□□ 10.4
RPS3P23396 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.96□□□□□ -1.466e-7■□□□□ 10.4
RPS3P23396 CALM2-205ENST00000460218 4502 ntTSL 1 (best)1.41□□□□□ -2.189e-9■□□□□ 10.4
RPS3P23396 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.75■□□□□ 0.433e-9■□□□□ 10.4
RPS3P23396 DDX3X-206ENST00000542215 1592 ntTSL 217.32■□□□□ 0.367e-7■□□□□ 10.4
RPS3P23396 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.273e-9■□□□□ 10.4
RPS3P23396 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.03■□□□□ -03e-9■□□□□ 10.4
RPS3P23396 RALY-204ENST00000413297 766 ntTSL 520.02■□□□□ 0.87e-12■□□□□ 10.4
RPS3P23396 CYP2W1-205ENST00000468456 557 ntTSL 417.17■□□□□ 0.346e-17■□□□□ 10.4
RPS3P23396 PRKAB1-209ENST00000545870 566 ntTSL 38.28□□□□□ -1.082e-6■□□□□ 10.4
RPS3P23396 PRKAB1-208ENST00000545223 583 ntTSL 27.13□□□□□ -1.272e-6■□□□□ 10.4
RPS3P23396 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.162e-6■□□□□ 10.4
RPS3P23396 RPL38-205ENST00000530646 2450 ntTSL 1 (best)17.48■□□□□ 0.391e-40■□□□□ 10.4
RPS3P23396 RPL38-203ENST00000528433 169 ntTSL 512.62□□□□□ -0.391e-40■□□□□ 10.4
RPS3P23396 RPL38-204ENST00000529123 576 ntTSL 210.08□□□□□ -0.81e-40■□□□□ 10.4
RPS3P23396 SLC13A5-212ENST00000576323 574 ntTSL 415.01□□□□□ -0.018e-13■□□□□ 10.4
RPS3P23396 SLC13A5-211ENST00000575230 547 ntTSL 514.67□□□□□ -0.068e-13■□□□□ 10.4
RPS3P23396 CAPRIN1-204ENST00000526494 399 ntTSL 415.7■□□□□ 0.12e-6■□□□□ 10.4
RPS3P23396 CAPRIN1-214ENST00000533641 429 ntTSL 41.94□□□□□ -2.12e-6■□□□□ 10.4
RPS3P23396 HK1-202ENST00000359426 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.673e-6■□□□□ 10.4
RPS3P23396 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.84■□□□□ 0.454e-8■□□□□ 10.4
RPS3P23396 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.214e-8■□□□□ 10.4
RPS3P23396 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.094e-8■□□□□ 10.4
RPS3P23396 OCIAD1-205ENST00000444354 1756 ntTSL 3 BASIC11.16□□□□□ -0.624e-8■□□□□ 10.4
RPS3P23396 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.624e-8■□□□□ 10.4
RPS3P23396 OCIAD1-203ENST00000396448 1306 ntTSL 1 (best) BASIC11.02□□□□□ -0.654e-8■□□□□ 10.4
RPS3P23396 OCIAD1-201ENST00000264312 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.714e-8■□□□□ 10.4
RPS3P23396 OCIAD1-210ENST00000506801 571 ntTSL 2 BASIC9.15□□□□□ -0.944e-8■□□□□ 10.4
Retrieved 100 of 24,271 protein–RNA pairs in 664 ms