RNA–Protein interactions for RNA: ENST00000601306.1

RPS11-208, Transcript of ribosomal protein S11, humanhuman

TSL 3

Gene RPS11, Length 547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS11-208ENST00000601306 NISCHQ9Y2I1 1504 aa17.42■□□□□ 0.38
RPS11-208ENST00000601306 ABCC9O60706 1549 aa16.86■□□□□ 0.29
RPS11-208ENST00000601306 DNAJC5BQ9UF47 199 aa16.72■□□□□ 0.27
RPS11-208ENST00000601306 DNAJC5Q9H3Z4 198 aa16.06■□□□□ 0.16
RPS11-208ENST00000601306 CCDC180Q9P1Z9 1646 aa15.87■□□□□ 0.13
RPS11-208ENST00000601306 RB1CC1Q8TDY2 1594 aa15.6■□□□□ 0.09
RPS11-208ENST00000601306 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
RPS11-208ENST00000601306 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
RPS11-208ENST00000601306 NACADO15069 1562 aa15.27■□□□□ 0.03
RPS11-208ENST00000601306 BICRAQ9NZM4 1560 aa15.2■□□□□ 0.02
RPS11-208ENST00000601306 UNC13AQ9UPW8 1703 aa15.2■□□□□ 0.02
RPS11-208ENST00000601306 CC2D2AQ9P2K1 1620 aa15.17■□□□□ 0.02
RPS11-208ENST00000601306 DCAF8L2P0C7V8 631 aa14.99□□□□□ -0.01
RPS11-208ENST00000601306 CUX2O14529 1486 aa14.94□□□□□ -0.02
RPS11-208ENST00000601306 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
RPS11-208ENST00000601306 EIF4G1Q04637 1599 aaKnown RBP14.9□□□□□ -0.02
RPS11-208ENST00000601306 SHROOM4Q9ULL8 1493 aa14.9□□□□□ -0.02
RPS11-208ENST00000601306 MYO15BQ96JP2 1530 aa14.76□□□□□ -0.05
RPS11-208ENST00000601306 ZCCHC6Q5VYS8 1495 aaKnown RBP14.66□□□□□ -0.06
RPS11-208ENST00000601306 ERCC6Q03468 1493 aa14.62□□□□□ -0.07
RPS11-208ENST00000601306 SCRIBQ14160 1630 aa14.44□□□□□ -0.1
RPS11-208ENST00000601306 DCAF1Q9Y4B6 1507 aa14.38□□□□□ -0.11
RPS11-208ENST00000601306 AEBP2Q6ZN18 517 aaPredicted RBP14.29□□□□□ -0.12
RPS11-208ENST00000601306 THOC2Q8NI27 1593 aaKnown RBP14.25□□□□□ -0.13
RPS11-208ENST00000601306 NESP48681 1621 aa14.2□□□□□ -0.14
RPS11-208ENST00000601306 NCAPD3P42695 1498 aa14.14□□□□□ -0.15
RPS11-208ENST00000601306 OSCARQ8IYS5 282 aa14.1□□□□□ -0.15
RPS11-208ENST00000601306 SMARCA2P51531 1590 aa14.05□□□□□ -0.16
RPS11-208ENST00000601306 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
RPS11-208ENST00000601306 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
RPS11-208ENST00000601306 RIMBP3CA6NJZ7 1639 aa13.99□□□□□ -0.17
RPS11-208ENST00000601306 RIMBP3BA6NNM3 1639 aa13.99□□□□□ -0.17
RPS11-208ENST00000601306 RIMBP3Q9UFD9 1639 aa13.99□□□□□ -0.17
RPS11-208ENST00000601306 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
RPS11-208ENST00000601306 ATAD2BQ9ULI0 1458 aa13.94□□□□□ -0.18
RPS11-208ENST00000601306 LAMC3Q9Y6N6 1575 aa13.94□□□□□ -0.18
RPS11-208ENST00000601306 HMGXB3Q12766 1538 aa13.92□□□□□ -0.18
RPS11-208ENST00000601306 PDS5BQ9NTI5 1447 aa13.91□□□□□ -0.18
RPS11-208ENST00000601306 ILDR1Q86SU0 546 aaPredicted RBP13.91□□□□□ -0.18
RPS11-208ENST00000601306 ARHGEF11O15085 1522 aa13.87□□□□□ -0.19
RPS11-208ENST00000601306 WDR62O43379 1518 aa13.85□□□□□ -0.19
RPS11-208ENST00000601306 CYB5RLQ6IPT4 315 aa13.84□□□□□ -0.19
RPS11-208ENST00000601306 MRC2Q9UBG0 1479 aa13.84□□□□□ -0.19
RPS11-208ENST00000601306 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
RPS11-208ENST00000601306 ARAP1Q96P48 1450 aa13.67□□□□□ -0.22
RPS11-208ENST00000601306 SMARCA4P51532 1647 aa13.66□□□□□ -0.22
RPS11-208ENST00000601306 CADPSQ9ULU8 1353 aa13.66□□□□□ -0.22
RPS11-208ENST00000601306 SUPT5HO00267 1087 aaKnown RBP13.59□□□□□ -0.23
RPS11-208ENST00000601306 CEP164Q9UPV0 1460 aa13.58□□□□□ -0.24
RPS11-208ENST00000601306 PEG3Q9GZU2 1588 aa13.55□□□□□ -0.24
RPS11-208ENST00000601306 RSF1Q96T23 1441 aaPredicted RBP13.49□□□□□ -0.25
RPS11-208ENST00000601306 MROH2BQ7Z745 1585 aa13.49□□□□□ -0.25
RPS11-208ENST00000601306 FANCD2Q9BXW9 1451 aa13.48□□□□□ -0.25
RPS11-208ENST00000601306 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
RPS11-208ENST00000601306 ZNF608Q9ULD9 1512 aaPredicted RBP13.44□□□□□ -0.26
RPS11-208ENST00000601306 WIZO95785 1651 aa13.42□□□□□ -0.26
RPS11-208ENST00000601306 IFT140Q96RY7 1462 aa13.36□□□□□ -0.27
RPS11-208ENST00000601306 CHD1O14646 1710 aa13.34□□□□□ -0.27
RPS11-208ENST00000601306 KDM4FA0A1W2PPD8 638 aa13.32□□□□□ -0.28
RPS11-208ENST00000601306 CFTRP13569 1480 aa13.29□□□□□ -0.28
RPS11-208ENST00000601306 FBLN2P98095 1184 aa13.29□□□□□ -0.28
RPS11-208ENST00000601306 EIF4G3O43432 1585 aaKnown RBP13.28□□□□□ -0.28
RPS11-208ENST00000601306 TOP2AP11388 1531 aaKnown RBP13.24□□□□□ -0.29
RPS11-208ENST00000601306 CLASP1Q7Z460 1538 aa13.21□□□□□ -0.29
RPS11-208ENST00000601306 AQRO60306 1485 aaKnown RBP eCLIP13.2□□□□□ -0.3not detected■■■■■ 69
RPS11-208ENST00000601306 FBXO41Q8TF61 875 aa13.19□□□□□ -0.3
RPS11-208ENST00000601306 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
RPS11-208ENST00000601306 ERCC6L2Q5T890 1561 aa13.16□□□□□ -0.3
RPS11-208ENST00000601306 LMTK3Q96Q04 1460 aa13.14□□□□□ -0.31
RPS11-208ENST00000601306 TOPBP1Q92547 1522 aa13.12□□□□□ -0.31
RPS11-208ENST00000601306 SYNJ1O43426 1573 aa13.1□□□□□ -0.31
RPS11-208ENST00000601306 HECW2Q9P2P5 1572 aa13.09□□□□□ -0.31
RPS11-208ENST00000601306 SOCS7O14512 581 aa13.08□□□□□ -0.32
RPS11-208ENST00000601306 KIF13AQ9H1H9 1805 aa13.08□□□□□ -0.32
RPS11-208ENST00000601306 TARBP1Q13395 1621 aaKnown RBP13.07□□□□□ -0.32
RPS11-208ENST00000601306 CCDC88BA6NC98 1476 aa13.07□□□□□ -0.32
RPS11-208ENST00000601306 CHMP7Q8WUX9 453 aaPredicted RBP13.05□□□□□ -0.32
RPS11-208ENST00000601306 CHIC1Q5VXU3 224 aa13.03□□□□□ -0.32
RPS11-208ENST00000601306 ABCC8Q09428 1581 aa13.03□□□□□ -0.32
RPS11-208ENST00000601306 SNAPC4Q5SXM2 1469 aa13.02□□□□□ -0.33
RPS11-208ENST00000601306 ILDR2Q71H61 639 aa12.99□□□□□ -0.33
RPS11-208ENST00000601306 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
RPS11-208ENST00000601306 DNMBPQ6XZF7 1577 aa12.98□□□□□ -0.33
RPS11-208ENST00000601306 KDM6BO15054 1643 aa12.97□□□□□ -0.33
RPS11-208ENST00000601306 TDRD9Q8NDG6 1382 aaKnown RBP12.96□□□□□ -0.33
RPS11-208ENST00000601306 ADGRL1O94910 1474 aa12.96□□□□□ -0.34
RPS11-208ENST00000601306 FAM69CQ0P6D2 419 aa12.95□□□□□ -0.34
RPS11-208ENST00000601306 SYNJ2O15056 1496 aa12.95□□□□□ -0.34
RPS11-208ENST00000601306 MAGI1Q96QZ7 1491 aaPredicted RBP12.95□□□□□ -0.34
RPS11-208ENST00000601306 POLA1P09884 1462 aaPredicted RBP12.93□□□□□ -0.34
RPS11-208ENST00000601306 ABCC10Q5T3U5 1492 aa12.92□□□□□ -0.34
RPS11-208ENST00000601306 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
RPS11-208ENST00000601306 DISP3Q9P2K9 1392 aa12.86□□□□□ -0.35
RPS11-208ENST00000601306 WDR97A6NE52 1622 aa12.86□□□□□ -0.35
RPS11-208ENST00000601306 SOGA1O94964 1423 aa12.85□□□□□ -0.35
RPS11-208ENST00000601306 GRIN2BQ13224 1484 aa12.85□□□□□ -0.35
RPS11-208ENST00000601306 DIP2BQ9P265 1576 aa12.84□□□□□ -0.35
RPS11-208ENST00000601306 CEP170Q5SW79 1584 aa12.81□□□□□ -0.36
RPS11-208ENST00000601306 MAPKBP1O60336 1514 aa12.79□□□□□ -0.36
RPS11-208ENST00000601306 NPM1P06748 294 aaKnown RBP eCLIP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms