RNA–Protein interactions for RNA: ENST00000545223.1

PRKAB1-208, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 2

Gene PRKAB1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-208ENST00000545223 NISCHQ9Y2I1 1504 aa17.15■□□□□ 0.34
PRKAB1-208ENST00000545223 CCDC180Q9P1Z9 1646 aa15.06■□□□□ 0
PRKAB1-208ENST00000545223 ABCC9O60706 1549 aa14.65□□□□□ -0.06
PRKAB1-208ENST00000545223 AEBP2Q6ZN18 517 aaPredicted RBP14.59□□□□□ -0.07
PRKAB1-208ENST00000545223 DCAF8L2P0C7V8 631 aa14.35□□□□□ -0.11
PRKAB1-208ENST00000545223 ZCCHC6Q5VYS8 1495 aaKnown RBP14.32□□□□□ -0.12
PRKAB1-208ENST00000545223 DCAF1Q9Y4B6 1507 aa14.13□□□□□ -0.15
PRKAB1-208ENST00000545223 NACADO15069 1562 aa14.13□□□□□ -0.15
PRKAB1-208ENST00000545223 DNAJC5BQ9UF47 199 aa14.09□□□□□ -0.15
PRKAB1-208ENST00000545223 RB1CC1Q8TDY2 1594 aa14.09□□□□□ -0.15
PRKAB1-208ENST00000545223 MYO15BQ96JP2 1530 aa14.08□□□□□ -0.16
PRKAB1-208ENST00000545223 SCRIBQ14160 1630 aa13.86□□□□□ -0.19
PRKAB1-208ENST00000545223 UNC13AQ9UPW8 1703 aa13.83□□□□□ -0.2
PRKAB1-208ENST00000545223 SHROOM4Q9ULL8 1493 aa13.81□□□□□ -0.2
PRKAB1-208ENST00000545223 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
PRKAB1-208ENST00000545223 BICRAQ9NZM4 1560 aa13.73□□□□□ -0.21
PRKAB1-208ENST00000545223 CHIC1Q5VXU3 224 aa13.65□□□□□ -0.22
PRKAB1-208ENST00000545223 DNAJC5Q9H3Z4 198 aa13.65□□□□□ -0.22
PRKAB1-208ENST00000545223 CECR2Q9BXF3 1484 aa13.42□□□□□ -0.26
PRKAB1-208ENST00000545223 EIF4G1Q04637 1599 aaKnown RBP13.32□□□□□ -0.28
PRKAB1-208ENST00000545223 MROH2BQ7Z745 1585 aa13.27□□□□□ -0.29
PRKAB1-208ENST00000545223 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
PRKAB1-208ENST00000545223 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
PRKAB1-208ENST00000545223 CC2D2AQ9P2K1 1620 aa13.22□□□□□ -0.29
PRKAB1-208ENST00000545223 RSF1Q96T23 1441 aaPredicted RBP13.19□□□□□ -0.3
PRKAB1-208ENST00000545223 WIZO95785 1651 aa13.15□□□□□ -0.31
PRKAB1-208ENST00000545223 ATAD2BQ9ULI0 1458 aa13.14□□□□□ -0.31
PRKAB1-208ENST00000545223 SUPT5HO00267 1087 aaKnown RBP13.12□□□□□ -0.31
PRKAB1-208ENST00000545223 PEG3Q9GZU2 1588 aa13.08□□□□□ -0.32
PRKAB1-208ENST00000545223 NCAPD3P42695 1498 aa13.07□□□□□ -0.32
PRKAB1-208ENST00000545223 SMARCA2P51531 1590 aa13.07□□□□□ -0.32
PRKAB1-208ENST00000545223 BAZ1BQ9UIG0 1483 aaKnown RBP13.02□□□□□ -0.33
PRKAB1-208ENST00000545223 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
PRKAB1-208ENST00000545223 TOP2AP11388 1531 aaKnown RBP12.95□□□□□ -0.34
PRKAB1-208ENST00000545223 CUX2O14529 1486 aa12.88□□□□□ -0.35
PRKAB1-208ENST00000545223 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
PRKAB1-208ENST00000545223 NESP48681 1621 aa12.77□□□□□ -0.37
PRKAB1-208ENST00000545223 CADPSQ9ULU8 1353 aa12.71□□□□□ -0.37
PRKAB1-208ENST00000545223 CFTRP13569 1480 aa12.68□□□□□ -0.38
PRKAB1-208ENST00000545223 LAMC3Q9Y6N6 1575 aa12.65□□□□□ -0.38
PRKAB1-208ENST00000545223 PDS5BQ9NTI5 1447 aa12.57□□□□□ -0.4
PRKAB1-208ENST00000545223 FANCD2Q9BXW9 1451 aa12.57□□□□□ -0.4
PRKAB1-208ENST00000545223 KIF21AQ7Z4S6 1674 aa12.56□□□□□ -0.4
PRKAB1-208ENST00000545223 PRDM2Q13029 1718 aa12.54□□□□□ -0.4
PRKAB1-208ENST00000545223 ERCC6Q03468 1493 aa12.54□□□□□ -0.4
PRKAB1-208ENST00000545223 SENP3Q9H4L4 574 aaPredicted RBP12.51□□□□□ -0.41
PRKAB1-208ENST00000545223 CEP164Q9UPV0 1460 aa12.5□□□□□ -0.41
PRKAB1-208ENST00000545223 ABCC8Q09428 1581 aa12.48□□□□□ -0.41
PRKAB1-208ENST00000545223 TRIM41Q8WV44 630 aa12.48□□□□□ -0.41
PRKAB1-208ENST00000545223 URB2Q14146 1524 aaKnown RBP12.46□□□□□ -0.42
PRKAB1-208ENST00000545223 THOC2Q8NI27 1593 aaKnown RBP12.44□□□□□ -0.42
PRKAB1-208ENST00000545223 MRC2Q9UBG0 1479 aa12.44□□□□□ -0.42
PRKAB1-208ENST00000545223 WRNQ14191 1432 aaPredicted RBP eCLIP12.41□□□□□ -0.42
PRKAB1-208ENST00000545223 CUX1P39880 1505 aa12.41□□□□□ -0.42
PRKAB1-208ENST00000545223 TOPBP1Q92547 1522 aa12.4□□□□□ -0.42
PRKAB1-208ENST00000545223 WDR62O43379 1518 aa12.39□□□□□ -0.43
PRKAB1-208ENST00000545223 SYNJ1O43426 1573 aa12.39□□□□□ -0.43
PRKAB1-208ENST00000545223 DNMBPQ6XZF7 1577 aa12.37□□□□□ -0.43
PRKAB1-208ENST00000545223 FGD5Q6ZNL6 1462 aa12.33□□□□□ -0.44
PRKAB1-208ENST00000545223 TOP2BQ02880 1626 aa12.33□□□□□ -0.44
PRKAB1-208ENST00000545223 PHF23Q9BUL5 403 aaPredicted RBP12.32□□□□□ -0.44
PRKAB1-208ENST00000545223 BIVM-ERCC5R4GMW8 1640 aa12.32□□□□□ -0.44
PRKAB1-208ENST00000545223 POLA1P09884 1462 aaPredicted RBP12.32□□□□□ -0.44
PRKAB1-208ENST00000545223 RAD54L2Q9Y4B4 1467 aa12.32□□□□□ -0.44
PRKAB1-208ENST00000545223 SOGA1O94964 1423 aa12.28□□□□□ -0.44
PRKAB1-208ENST00000545223 TARBP1Q13395 1621 aaKnown RBP12.24□□□□□ -0.45
PRKAB1-208ENST00000545223 ZNF608Q9ULD9 1512 aaPredicted RBP12.23□□□□□ -0.45
PRKAB1-208ENST00000545223 IFT140Q96RY7 1462 aa12.23□□□□□ -0.45
PRKAB1-208ENST00000545223 TDRD9Q8NDG6 1382 aaKnown RBP12.22□□□□□ -0.45
PRKAB1-208ENST00000545223 RUSC2Q8N2Y8 1516 aa12.2□□□□□ -0.46
PRKAB1-208ENST00000545223 AQRO60306 1485 aaKnown RBP eCLIP12.2□□□□□ -0.464e-7■■■■□ 22.8
PRKAB1-208ENST00000545223 ABCA10Q8WWZ4 1543 aa12.19□□□□□ -0.46
PRKAB1-208ENST00000545223 WDR97A6NE52 1622 aa12.18□□□□□ -0.46
PRKAB1-208ENST00000545223 FAM9AQ8IZU1 332 aaPredicted RBP12.14□□□□□ -0.47
PRKAB1-208ENST00000545223 EIF4G3O43432 1585 aaKnown RBP12.13□□□□□ -0.47
PRKAB1-208ENST00000545223 GAPVD1Q14C86 1478 aa12.12□□□□□ -0.47
PRKAB1-208ENST00000545223 ABCA5Q8WWZ7 1642 aa12.11□□□□□ -0.47
PRKAB1-208ENST00000545223 KIF27Q86VH2 1401 aa12.11□□□□□ -0.47
PRKAB1-208ENST00000545223 IGF1RP08069 1367 aa12.08□□□□□ -0.48
PRKAB1-208ENST00000545223 GRIN2BQ13224 1484 aa12.07□□□□□ -0.48
PRKAB1-208ENST00000545223 PBRM1Q86U86 1689 aa12.06□□□□□ -0.48
PRKAB1-208ENST00000545223 CSRNP3Q8WYN3 585 aa12.05□□□□□ -0.48
PRKAB1-208ENST00000545223 SNAPC4Q5SXM2 1469 aa12.05□□□□□ -0.48
PRKAB1-208ENST00000545223 RIMBP3CA6NJZ7 1639 aa12.03□□□□□ -0.48
PRKAB1-208ENST00000545223 RIMBP3BA6NNM3 1639 aa12.03□□□□□ -0.48
PRKAB1-208ENST00000545223 RIMBP3Q9UFD9 1639 aa12.03□□□□□ -0.48
PRKAB1-208ENST00000545223 ERICH3Q5RHP9 1530 aa12.02□□□□□ -0.48
PRKAB1-208ENST00000545223 FBLN2P98095 1184 aa12.02□□□□□ -0.49
PRKAB1-208ENST00000545223 EHMT2Q96KQ7 1210 aa12.02□□□□□ -0.49
PRKAB1-208ENST00000545223 CARMIL1Q5VZK9 1371 aa12□□□□□ -0.49
PRKAB1-208ENST00000545223 EEA1Q15075 1411 aa11.99□□□□□ -0.49
PRKAB1-208ENST00000545223 ADAMTS12P58397 1594 aa11.98□□□□□ -0.49
PRKAB1-208ENST00000545223 MAGI1Q96QZ7 1491 aaPredicted RBP11.98□□□□□ -0.49
PRKAB1-208ENST00000545223 CHMP7Q8WUX9 453 aaPredicted RBP11.98□□□□□ -0.49
PRKAB1-208ENST00000545223 FHAD1B1AJZ9 1412 aa11.97□□□□□ -0.49
PRKAB1-208ENST00000545223 OSCARQ8IYS5 282 aa11.97□□□□□ -0.49
PRKAB1-208ENST00000545223 SYNJ2O15056 1496 aa11.96□□□□□ -0.49
PRKAB1-208ENST00000545223 PRXQ9BXM0 1461 aa11.95□□□□□ -0.5
PRKAB1-208ENST00000545223 CHD1O14646 1710 aa11.94□□□□□ -0.5
PRKAB1-208ENST00000545223 CUL7Q14999 1698 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms