RNA–Protein interactions for RNA: ENST00000483474.1

RTCA-204, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 3

Gene RTCA, Length 683 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-204ENST00000483474 NISCHQ9Y2I1 1504 aa42.45■■■■■ 4.39
RTCA-204ENST00000483474 CCDC180Q9P1Z9 1646 aa37.93■■■■□ 3.66
RTCA-204ENST00000483474 ABCC9O60706 1549 aa37.35■■■■□ 3.57
RTCA-204ENST00000483474 RB1CC1Q8TDY2 1594 aa35.87■■■■□ 3.33
RTCA-204ENST00000483474 DCAF8L2P0C7V8 631 aa35.76■■■■□ 3.32
RTCA-204ENST00000483474 NACADO15069 1562 aa35.73■■■■□ 3.31
RTCA-204ENST00000483474 MYO15BQ96JP2 1530 aa35.37■■■■□ 3.25
RTCA-204ENST00000483474 ZCCHC6Q5VYS8 1495 aaKnown RBP35.27■■■■□ 3.24
RTCA-204ENST00000483474 DCAF1Q9Y4B6 1507 aa35.11■■■■□ 3.21
RTCA-204ENST00000483474 UNC13AQ9UPW8 1703 aa35.01■■■■□ 3.2
RTCA-204ENST00000483474 PABPN1Q86U42 306 aaKnown RBP eCLIP34.85■■■■□ 3.17
RTCA-204ENST00000483474 BICRAQ9NZM4 1560 aa34.65■■■■□ 3.14
RTCA-204ENST00000483474 SCRIBQ14160 1630 aa34.55■■■■□ 3.12
RTCA-204ENST00000483474 DNAJC5BQ9UF47 199 aa34.44■■■■□ 3.1
RTCA-204ENST00000483474 SHROOM4Q9ULL8 1493 aa34.37■■■■□ 3.09
RTCA-204ENST00000483474 EIF4G1Q04637 1599 aaKnown RBP33.83■■■■□ 3.01
RTCA-204ENST00000483474 CC2D2AQ9P2K1 1620 aa33.79■■■■□ 3
RTCA-204ENST00000483474 CECR2Q9BXF3 1484 aa33.61■■■□□ 2.97
RTCA-204ENST00000483474 SMARCA4P51532 1647 aa33.02■■■□□ 2.88
RTCA-204ENST00000483474 BAZ1AQ9NRL2 1556 aaPredicted RBP32.97■■■□□ 2.87
RTCA-204ENST00000483474 NCAPD3P42695 1498 aa32.93■■■□□ 2.86
RTCA-204ENST00000483474 SMARCA2P51531 1590 aa32.92■■■□□ 2.86
RTCA-204ENST00000483474 ATAD2BQ9ULI0 1458 aa32.88■■■□□ 2.85
RTCA-204ENST00000483474 HMGXB3Q12766 1538 aa32.75■■■□□ 2.83
RTCA-204ENST00000483474 MROH2BQ7Z745 1585 aa32.67■■■□□ 2.82
RTCA-204ENST00000483474 BAZ1BQ9UIG0 1483 aaKnown RBP32.67■■■□□ 2.82
RTCA-204ENST00000483474 PEG3Q9GZU2 1588 aa32.66■■■□□ 2.82
RTCA-204ENST00000483474 WIZO95785 1651 aa32.36■■■□□ 2.77
RTCA-204ENST00000483474 ERCC6Q03468 1493 aa32.31■■■□□ 2.76
RTCA-204ENST00000483474 RSF1Q96T23 1441 aaPredicted RBP32.2■■■□□ 2.75
RTCA-204ENST00000483474 NESP48681 1621 aa32.18■■■□□ 2.74
RTCA-204ENST00000483474 LAMC3Q9Y6N6 1575 aa32.16■■■□□ 2.74
RTCA-204ENST00000483474 CUX2O14529 1486 aa32.02■■■□□ 2.72
RTCA-204ENST00000483474 TOP2AP11388 1531 aaKnown RBP32■■■□□ 2.71
RTCA-204ENST00000483474 PDS5BQ9NTI5 1447 aa31.99■■■□□ 2.71
RTCA-204ENST00000483474 CADPSQ9ULU8 1353 aa31.97■■■□□ 2.71
RTCA-204ENST00000483474 KIF21AQ7Z4S6 1674 aa31.87■■■□□ 2.69
RTCA-204ENST00000483474 THOC2Q8NI27 1593 aaKnown RBP31.77■■■□□ 2.68
RTCA-204ENST00000483474 CFTRP13569 1480 aa31.69■■■□□ 2.66
RTCA-204ENST00000483474 CEP164Q9UPV0 1460 aa31.63■■■□□ 2.65
RTCA-204ENST00000483474 FANCD2Q9BXW9 1451 aa31.61■■■□□ 2.65
RTCA-204ENST00000483474 MRC2Q9UBG0 1479 aa31.61■■■□□ 2.65
RTCA-204ENST00000483474 CCDC88BA6NC98 1476 aa31.6■■■□□ 2.65
RTCA-204ENST00000483474 PRDM2Q13029 1718 aa31.55■■■□□ 2.64
RTCA-204ENST00000483474 WDR62O43379 1518 aa31.49■■■□□ 2.63
RTCA-204ENST00000483474 DNAJC5Q9H3Z4 198 aa31.36■■■□□ 2.61
RTCA-204ENST00000483474 SUPT5HO00267 1087 aaKnown RBP31.31■■■□□ 2.6
RTCA-204ENST00000483474 URB2Q14146 1524 aaKnown RBP31.25■■■□□ 2.59
RTCA-204ENST00000483474 ABCC8Q09428 1581 aa31.15■■■□□ 2.58
RTCA-204ENST00000483474 TOPBP1Q92547 1522 aa31.06■■■□□ 2.56
RTCA-204ENST00000483474 DNMBPQ6XZF7 1577 aa31.02■■■□□ 2.56
RTCA-204ENST00000483474 IFT140Q96RY7 1462 aa30.97■■■□□ 2.55
RTCA-204ENST00000483474 ZNF608Q9ULD9 1512 aaPredicted RBP30.77■■■□□ 2.52
RTCA-204ENST00000483474 POLA1P09884 1462 aaPredicted RBP30.76■■■□□ 2.51
RTCA-204ENST00000483474 TARBP1Q13395 1621 aaKnown RBP30.72■■■□□ 2.51
RTCA-204ENST00000483474 OSCARQ8IYS5 282 aa30.71■■■□□ 2.51
RTCA-204ENST00000483474 SOGA1O94964 1423 aa30.69■■■□□ 2.5
RTCA-204ENST00000483474 EIF4G3O43432 1585 aaKnown RBP30.69■■■□□ 2.5
RTCA-204ENST00000483474 CUX1P39880 1505 aa30.68■■■□□ 2.5
RTCA-204ENST00000483474 FGD5Q6ZNL6 1462 aa30.66■■■□□ 2.5
RTCA-204ENST00000483474 RAD54L2Q9Y4B4 1467 aa30.62■■■□□ 2.49
RTCA-204ENST00000483474 AQRO60306 1485 aaKnown RBP eCLIP30.61■■■□□ 2.492e-11■■■■■ 27.9
RTCA-204ENST00000483474 WDR97A6NE52 1622 aa30.55■■■□□ 2.48
RTCA-204ENST00000483474 TDRD9Q8NDG6 1382 aaKnown RBP30.52■■■□□ 2.48
RTCA-204ENST00000483474 FBLN2P98095 1184 aa30.44■■■□□ 2.46
RTCA-204ENST00000483474 WRNQ14191 1432 aaPredicted RBP eCLIP30.44■■■□□ 2.46
RTCA-204ENST00000483474 CHD1O14646 1710 aa30.41■■■□□ 2.46
RTCA-204ENST00000483474 BIVM-ERCC5R4GMW8 1640 aa30.4■■■□□ 2.46
RTCA-204ENST00000483474 TOP2BQ02880 1626 aa30.39■■■□□ 2.46
RTCA-204ENST00000483474 GRIN2BQ13224 1484 aa30.36■■■□□ 2.45
RTCA-204ENST00000483474 ABCA10Q8WWZ4 1543 aa30.35■■■□□ 2.45
RTCA-204ENST00000483474 GAPVD1Q14C86 1478 aa30.32■■■□□ 2.44
RTCA-204ENST00000483474 SYNJ1O43426 1573 aa30.32■■■□□ 2.44
RTCA-204ENST00000483474 SNAPC4Q5SXM2 1469 aa30.31■■■□□ 2.44
RTCA-204ENST00000483474 MAGI1Q96QZ7 1491 aaPredicted RBP30.31■■■□□ 2.44
RTCA-204ENST00000483474 PBRM1Q86U86 1689 aa30.3■■■□□ 2.44
RTCA-204ENST00000483474 CHMP7Q8WUX9 453 aaPredicted RBP30.29■■■□□ 2.44
RTCA-204ENST00000483474 TRIM41Q8WV44 630 aa30.28■■■□□ 2.44
RTCA-204ENST00000483474 ABCA5Q8WWZ7 1642 aa30.24■■■□□ 2.43
RTCA-204ENST00000483474 SYNJ2O15056 1496 aa30.19■■■□□ 2.42
RTCA-204ENST00000483474 RIMBP3CA6NJZ7 1639 aa30.16■■■□□ 2.42
RTCA-204ENST00000483474 RIMBP3BA6NNM3 1639 aa30.16■■■□□ 2.42
RTCA-204ENST00000483474 RIMBP3Q9UFD9 1639 aa30.16■■■□□ 2.42
RTCA-204ENST00000483474 ARHGEF11O15085 1522 aa30.11■■■□□ 2.41
RTCA-204ENST00000483474 ERICH3Q5RHP9 1530 aa30.01■■■□□ 2.4
RTCA-204ENST00000483474 CLASP1Q7Z460 1538 aa29.98■■■□□ 2.39
RTCA-204ENST00000483474 ADAMTS12P58397 1594 aa29.98■■■□□ 2.39
RTCA-204ENST00000483474 FHAD1B1AJZ9 1412 aa29.96■■■□□ 2.39
RTCA-204ENST00000483474 GRIN2AQ12879 1464 aa29.94■■■□□ 2.38
RTCA-204ENST00000483474 CYB5RLQ6IPT4 315 aa29.93■■■□□ 2.38
RTCA-204ENST00000483474 KIF27Q86VH2 1401 aa29.87■■■□□ 2.37
RTCA-204ENST00000483474 ARAP1Q96P48 1450 aa29.8■■■□□ 2.36
RTCA-204ENST00000483474 NUP160Q12769 1436 aa29.78■■■□□ 2.36
RTCA-204ENST00000483474 CEP170Q5SW79 1584 aa29.77■■■□□ 2.36
RTCA-204ENST00000483474 CUL7Q14999 1698 aa29.72■■■□□ 2.35
RTCA-204ENST00000483474 IGF1RP08069 1367 aa29.71■■■□□ 2.35
RTCA-204ENST00000483474 SHROOM2Q13796 1616 aa29.6■■■□□ 2.33
RTCA-204ENST00000483474 CARMIL1Q5VZK9 1371 aa29.58■■■□□ 2.33
RTCA-204ENST00000483474 JPH4Q96JJ6 628 aa29.57■■■□□ 2.32
RTCA-204ENST00000483474 RUSC2Q8N2Y8 1516 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms