RNA–Protein interactions for RNA: ENST00000599561.1

RPS11-205, Transcript of ribosomal protein S11, humanhuman

TSL 5 BASIC

Gene RPS11, Length 430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS11-205ENST00000599561 NISCHQ9Y2I1 1504 aa16.38■□□□□ 0.21
RPS11-205ENST00000599561 CCDC180Q9P1Z9 1646 aa14.54□□□□□ -0.08
RPS11-205ENST00000599561 ABCC9O60706 1549 aa14.47□□□□□ -0.09
RPS11-205ENST00000599561 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
RPS11-205ENST00000599561 RB1CC1Q8TDY2 1594 aa13.85□□□□□ -0.19
RPS11-205ENST00000599561 NACADO15069 1562 aa13.8□□□□□ -0.2
RPS11-205ENST00000599561 DNAJC5BQ9UF47 199 aa13.79□□□□□ -0.2
RPS11-205ENST00000599561 MYO15BQ96JP2 1530 aa13.67□□□□□ -0.22
RPS11-205ENST00000599561 ZCCHC6Q5VYS8 1495 aaKnown RBP13.59□□□□□ -0.23
RPS11-205ENST00000599561 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
RPS11-205ENST00000599561 DCAF1Q9Y4B6 1507 aa13.54□□□□□ -0.24
RPS11-205ENST00000599561 DNAJC5Q9H3Z4 198 aa13.46□□□□□ -0.25
RPS11-205ENST00000599561 BICRAQ9NZM4 1560 aa13.33□□□□□ -0.28
RPS11-205ENST00000599561 SHROOM4Q9ULL8 1493 aa13.31□□□□□ -0.28
RPS11-205ENST00000599561 UNC13AQ9UPW8 1703 aa13.3□□□□□ -0.28
RPS11-205ENST00000599561 SCRIBQ14160 1630 aa13.28□□□□□ -0.28
RPS11-205ENST00000599561 EIF4G1Q04637 1599 aaKnown RBP13.05□□□□□ -0.32
RPS11-205ENST00000599561 CECR2Q9BXF3 1484 aa13.04□□□□□ -0.32
RPS11-205ENST00000599561 CC2D2AQ9P2K1 1620 aa13.02□□□□□ -0.33
RPS11-205ENST00000599561 NCAPD3P42695 1498 aa12.77□□□□□ -0.37
RPS11-205ENST00000599561 BAZ1AQ9NRL2 1556 aaPredicted RBP12.73□□□□□ -0.37
RPS11-205ENST00000599561 ATAD2BQ9ULI0 1458 aa12.72□□□□□ -0.37
RPS11-205ENST00000599561 SMARCA2P51531 1590 aa12.71□□□□□ -0.37
RPS11-205ENST00000599561 SMARCA4P51532 1647 aa12.69□□□□□ -0.38
RPS11-205ENST00000599561 BAZ1BQ9UIG0 1483 aaKnown RBP12.64□□□□□ -0.39
RPS11-205ENST00000599561 HMGXB3Q12766 1538 aa12.63□□□□□ -0.39
RPS11-205ENST00000599561 MROH2BQ7Z745 1585 aa12.59□□□□□ -0.39
RPS11-205ENST00000599561 PEG3Q9GZU2 1588 aa12.57□□□□□ -0.4
RPS11-205ENST00000599561 ERCC6Q03468 1493 aa12.55□□□□□ -0.4
RPS11-205ENST00000599561 AEBP2Q6ZN18 517 aaPredicted RBP12.54□□□□□ -0.4
RPS11-205ENST00000599561 RSF1Q96T23 1441 aaPredicted RBP12.45□□□□□ -0.42
RPS11-205ENST00000599561 CUX2O14529 1486 aa12.44□□□□□ -0.42
RPS11-205ENST00000599561 PDS5BQ9NTI5 1447 aa12.44□□□□□ -0.42
RPS11-205ENST00000599561 NESP48681 1621 aa12.44□□□□□ -0.42
RPS11-205ENST00000599561 CADPSQ9ULU8 1353 aa12.42□□□□□ -0.42
RPS11-205ENST00000599561 LAMC3Q9Y6N6 1575 aa12.41□□□□□ -0.42
RPS11-205ENST00000599561 WIZO95785 1651 aa12.39□□□□□ -0.43
RPS11-205ENST00000599561 TRIM41Q8WV44 630 aa12.37□□□□□ -0.43
RPS11-205ENST00000599561 TOP2AP11388 1531 aaKnown RBP12.32□□□□□ -0.44
RPS11-205ENST00000599561 CHIC1Q5VXU3 224 aa12.28□□□□□ -0.44
RPS11-205ENST00000599561 CFTRP13569 1480 aa12.27□□□□□ -0.45
RPS11-205ENST00000599561 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
RPS11-205ENST00000599561 FANCD2Q9BXW9 1451 aa12.24□□□□□ -0.45
RPS11-205ENST00000599561 CEP164Q9UPV0 1460 aa12.24□□□□□ -0.45
RPS11-205ENST00000599561 THOC2Q8NI27 1593 aaKnown RBP12.22□□□□□ -0.45
RPS11-205ENST00000599561 CCDC88BA6NC98 1476 aa12.21□□□□□ -0.46
RPS11-205ENST00000599561 KIF21AQ7Z4S6 1674 aa12.18□□□□□ -0.46
RPS11-205ENST00000599561 WDR62O43379 1518 aa12.16□□□□□ -0.46
RPS11-205ENST00000599561 SUPT5HO00267 1087 aaKnown RBP12.13□□□□□ -0.47
RPS11-205ENST00000599561 URB2Q14146 1524 aaKnown RBP12.07□□□□□ -0.48
RPS11-205ENST00000599561 ABCC8Q09428 1581 aa12.07□□□□□ -0.48
RPS11-205ENST00000599561 IFT140Q96RY7 1462 aa12.01□□□□□ -0.49
RPS11-205ENST00000599561 TOPBP1Q92547 1522 aa12□□□□□ -0.49
RPS11-205ENST00000599561 OSCARQ8IYS5 282 aa11.99□□□□□ -0.49
RPS11-205ENST00000599561 PRDM2Q13029 1718 aa11.97□□□□□ -0.49
RPS11-205ENST00000599561 DNMBPQ6XZF7 1577 aa11.95□□□□□ -0.5
RPS11-205ENST00000599561 SOGA1O94964 1423 aa11.91□□□□□ -0.5
RPS11-205ENST00000599561 ZNF608Q9ULD9 1512 aaPredicted RBP11.9□□□□□ -0.5
RPS11-205ENST00000599561 POLA1P09884 1462 aaPredicted RBP11.89□□□□□ -0.51
RPS11-205ENST00000599561 FBLN2P98095 1184 aa11.86□□□□□ -0.51
RPS11-205ENST00000599561 AQRO60306 1485 aaKnown RBP eCLIP11.86□□□□□ -0.51not detected■■■■■ 69
RPS11-205ENST00000599561 TDRD9Q8NDG6 1382 aaKnown RBP11.85□□□□□ -0.51
RPS11-205ENST00000599561 FGD5Q6ZNL6 1462 aa11.84□□□□□ -0.51
RPS11-205ENST00000599561 RAD54L2Q9Y4B4 1467 aa11.84□□□□□ -0.51
RPS11-205ENST00000599561 CUX1P39880 1505 aa11.81□□□□□ -0.52
RPS11-205ENST00000599561 CHMP7Q8WUX9 453 aaPredicted RBP11.81□□□□□ -0.52
RPS11-205ENST00000599561 TARBP1Q13395 1621 aaKnown RBP11.8□□□□□ -0.52
RPS11-205ENST00000599561 EIF4G3O43432 1585 aaKnown RBP11.79□□□□□ -0.52
RPS11-205ENST00000599561 WRNQ14191 1432 aaPredicted RBP eCLIP11.79□□□□□ -0.52
RPS11-205ENST00000599561 GRIN2BQ13224 1484 aa11.77□□□□□ -0.52
RPS11-205ENST00000599561 ILDR1Q86SU0 546 aaPredicted RBP11.77□□□□□ -0.53
RPS11-205ENST00000599561 WDR97A6NE52 1622 aa11.76□□□□□ -0.53
RPS11-205ENST00000599561 GAPVD1Q14C86 1478 aa11.73□□□□□ -0.53
RPS11-205ENST00000599561 SNAPC4Q5SXM2 1469 aa11.73□□□□□ -0.53
RPS11-205ENST00000599561 MAGI1Q96QZ7 1491 aaPredicted RBP11.73□□□□□ -0.53
RPS11-205ENST00000599561 ABCA10Q8WWZ4 1543 aa11.72□□□□□ -0.53
RPS11-205ENST00000599561 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
RPS11-205ENST00000599561 CYB5RLQ6IPT4 315 aa11.68□□□□□ -0.54
RPS11-205ENST00000599561 TOP2BQ02880 1626 aa11.68□□□□□ -0.54
RPS11-205ENST00000599561 ARHGEF11O15085 1522 aa11.66□□□□□ -0.54
RPS11-205ENST00000599561 SYNJ1O43426 1573 aa11.64□□□□□ -0.55
RPS11-205ENST00000599561 RIMBP3CA6NJZ7 1639 aa11.62□□□□□ -0.55
RPS11-205ENST00000599561 RIMBP3BA6NNM3 1639 aa11.62□□□□□ -0.55
RPS11-205ENST00000599561 RIMBP3Q9UFD9 1639 aa11.62□□□□□ -0.55
RPS11-205ENST00000599561 BIVM-ERCC5R4GMW8 1640 aa11.62□□□□□ -0.55
RPS11-205ENST00000599561 FHAD1B1AJZ9 1412 aa11.61□□□□□ -0.55
RPS11-205ENST00000599561 CHD1O14646 1710 aa11.61□□□□□ -0.55
RPS11-205ENST00000599561 ABCA5Q8WWZ7 1642 aa11.6□□□□□ -0.55
RPS11-205ENST00000599561 GRIN2AQ12879 1464 aa11.58□□□□□ -0.56
RPS11-205ENST00000599561 ERICH3Q5RHP9 1530 aa11.58□□□□□ -0.56
RPS11-205ENST00000599561 KIF27Q86VH2 1401 aa11.58□□□□□ -0.56
RPS11-205ENST00000599561 CLASP1Q7Z460 1538 aa11.56□□□□□ -0.56
RPS11-205ENST00000599561 PBRM1Q86U86 1689 aa11.55□□□□□ -0.56
RPS11-205ENST00000599561 TRHP20396 242 aaPredicted RBP11.55□□□□□ -0.56
RPS11-205ENST00000599561 ARAP1Q96P48 1450 aa11.55□□□□□ -0.56
RPS11-205ENST00000599561 NUP160Q12769 1436 aa11.53□□□□□ -0.56
RPS11-205ENST00000599561 ADAMTS12P58397 1594 aa11.53□□□□□ -0.56
RPS11-205ENST00000599561 IGF1RP08069 1367 aa11.53□□□□□ -0.56
RPS11-205ENST00000599561 JPH4Q96JJ6 628 aa11.51□□□□□ -0.57
RPS11-205ENST00000599561 CARMIL1Q5VZK9 1371 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms