RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 DCAF8L2P0C7V8 631 aa10.84□□□□□ -0.67
CHD8-202ENST00000430710 PELP1Q8IZL8 1130 aaKnown RBP10.03□□□□□ -0.8
CHD8-202ENST00000430710 MYT1Q01538 1121 aa9.89□□□□□ -0.83
CHD8-202ENST00000430710 SUPT5HO00267 1087 aaKnown RBP9.83□□□□□ -0.84
CHD8-202ENST00000430710 NISCHQ9Y2I1 1504 aa9.76□□□□□ -0.85
CHD8-202ENST00000430710 CENPBP07199 599 aaPredicted RBP9.66□□□□□ -0.86
CHD8-202ENST00000430710 EHMT2Q96KQ7 1210 aa9.62□□□□□ -0.87
CHD8-202ENST00000430710 ZEB1P37275 1124 aaPredicted RBP9.62□□□□□ -0.87
CHD8-202ENST00000430710 PCGF6Q9BYE7 350 aa9.59□□□□□ -0.87
CHD8-202ENST00000430710 SHROOM4Q9ULL8 1493 aa9.56□□□□□ -0.88
CHD8-202ENST00000430710 ERICH6Q7L0X2 663 aa9.55□□□□□ -0.88
CHD8-202ENST00000430710 CCER1Q8TC90 406 aaPredicted RBP9.54□□□□□ -0.88
CHD8-202ENST00000430710 TTBK1Q5TCY1 1321 aaPredicted RBP9.45□□□□□ -0.9
CHD8-202ENST00000430710 APLP2Q06481 763 aa9.44□□□□□ -0.9
CHD8-202ENST00000430710 CHIC1Q5VXU3 224 aa9.36□□□□□ -0.91
CHD8-202ENST00000430710 RANGAP1P46060 587 aaPredicted RBP9.33□□□□□ -0.92
CHD8-202ENST00000430710 NEFLP07196 543 aa9.32□□□□□ -0.92
CHD8-202ENST00000430710 HRCP23327 699 aa9.32□□□□□ -0.92
CHD8-202ENST00000430710 MYT1LQ9UL68 1186 aa9.31□□□□□ -0.92
CHD8-202ENST00000430710 FAM9AQ8IZU1 332 aaPredicted RBP9.3□□□□□ -0.92
CHD8-202ENST00000430710 ATP1B4Q9UN42 357 aaPredicted RBP9.28□□□□□ -0.92
CHD8-202ENST00000430710 TRIM26Q12899 539 aaPredicted RBP9.22□□□□□ -0.93
CHD8-202ENST00000430710 YTHDC1Q96MU7 727 aaKnown RBP9.22□□□□□ -0.93
CHD8-202ENST00000430710 PLPPR3Q6T4P5 718 aa9.21□□□□□ -0.94
CHD8-202ENST00000430710 TRIM41Q8WV44 630 aa9.15□□□□□ -0.94
CHD8-202ENST00000430710 DAXXQ9UER7 740 aaPredicted RBP9.03□□□□□ -0.96
CHD8-202ENST00000430710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.01□□□□□ -0.97
CHD8-202ENST00000430710 HNRNPUL2Q1KMD3 747 aaKnown RBP9.01□□□□□ -0.97
CHD8-202ENST00000430710 UBTFP17480 764 aaKnown RBP9□□□□□ -0.97
CHD8-202ENST00000430710 PABPN1Q86U42 306 aaKnown RBP eCLIP8.99□□□□□ -0.97
CHD8-202ENST00000430710 PPARGC1BQ86YN6 1023 aaKnown RBP8.98□□□□□ -0.97
CHD8-202ENST00000430710 FBLN2P98095 1184 aa8.98□□□□□ -0.97
CHD8-202ENST00000430710 RTL5Q5HYW3 569 aaPredicted RBP8.97□□□□□ -0.97
CHD8-202ENST00000430710 DIEXFQ68CQ4 756 aaKnown RBP8.97□□□□□ -0.97
CHD8-202ENST00000430710 GTF3C3Q9Y5Q9 886 aa8.91□□□□□ -0.98
CHD8-202ENST00000430710 ABCC9O60706 1549 aa8.91□□□□□ -0.98
CHD8-202ENST00000430710 AEBP2Q6ZN18 517 aaPredicted RBP8.89□□□□□ -0.99
CHD8-202ENST00000430710 SENP3Q9H4L4 574 aaPredicted RBP8.88□□□□□ -0.99
CHD8-202ENST00000430710 LOC105371045A0A1W2PR82 267 aa8.85□□□□□ -0.99
CHD8-202ENST00000430710 TRHP20396 242 aaPredicted RBP8.84□□□□□ -0.99
CHD8-202ENST00000430710 ZNF316A6NFI3 1004 aaPredicted RBP8.83□□□□□ -1
CHD8-202ENST00000430710 ACIN1Q9UKV3 1341 aaKnown RBP8.82□□□□□ -1
CHD8-202ENST00000430710 BCANQ96GW7 911 aa8.8□□□□□ -1
CHD8-202ENST00000430710 CDK11AQ9UQ88 783 aaPredicted RBP8.79□□□□□ -1
CHD8-202ENST00000430710 CLSPNQ9HAW4 1339 aa8.78□□□□□ -1
CHD8-202ENST00000430710 SLC4A1APQ9BWU0 796 aaKnown RBP8.74□□□□□ -1.01
CHD8-202ENST00000430710 ITGAEP38570 1179 aa8.71□□□□□ -1.02
CHD8-202ENST00000430710 POLR3GLQ9BT43 218 aa8.7□□□□□ -1.02
CHD8-202ENST00000430710 ANP32CO43423 234 aa8.66□□□□□ -1.02
CHD8-202ENST00000430710 SCAF1Q9H7N4 1312 aaKnown RBP8.65□□□□□ -1.02
CHD8-202ENST00000430710 ANP32AP39687 249 aaKnown RBP8.65□□□□□ -1.02
CHD8-202ENST00000430710 GLIPR1L2Q4G1C9 344 aa8.65□□□□□ -1.03
CHD8-202ENST00000430710 PLEKHG5O94827 1062 aa8.64□□□□□ -1.03
CHD8-202ENST00000430710 A0A0G2JS52 829 aa8.62□□□□□ -1.03
CHD8-202ENST00000430710 DCAF1Q9Y4B6 1507 aa8.61□□□□□ -1.03
CHD8-202ENST00000430710 ARID3CA6NKF2 412 aa8.6□□□□□ -1.03
CHD8-202ENST00000430710 EIF5BO60841 1220 aaKnown RBP8.59□□□□□ -1.03
CHD8-202ENST00000430710 ESF1Q9H501 851 aaKnown RBP8.59□□□□□ -1.03
CHD8-202ENST00000430710 CNGB1Q14028 1251 aaPredicted RBP8.58□□□□□ -1.04
CHD8-202ENST00000430710 SLC24A1O60721 1099 aa8.58□□□□□ -1.04
CHD8-202ENST00000430710 NEUROD1Q13562 356 aa8.54□□□□□ -1.04
CHD8-202ENST00000430710 FKBP8Q14318 412 aa8.52□□□□□ -1.04
CHD8-202ENST00000430710 FAM50AQ14320 339 aaKnown RBP8.51□□□□□ -1.05
CHD8-202ENST00000430710 NPM1P06748 294 aaKnown RBP eCLIP8.51□□□□□ -1.05
CHD8-202ENST00000430710 ANP32BQ92688 251 aaKnown RBP8.49□□□□□ -1.05
CHD8-202ENST00000430710 ARID4BQ4LE39 1312 aaPredicted RBP8.49□□□□□ -1.05
CHD8-202ENST00000430710 ANP32EQ9BTT0 268 aa8.46□□□□□ -1.05
CHD8-202ENST00000430710 NPM2Q86SE8 214 aaKnown RBP8.46□□□□□ -1.06
CHD8-202ENST00000430710 ZBTB47Q9UFB7 747 aaPredicted RBP8.46□□□□□ -1.06
CHD8-202ENST00000430710 TRIM52Q96A61 297 aa8.45□□□□□ -1.06
CHD8-202ENST00000430710 CCDC180Q9P1Z9 1646 aa8.45□□□□□ -1.06
CHD8-202ENST00000430710 NBR1Q14596 966 aa8.43□□□□□ -1.06
CHD8-202ENST00000430710 CANXP27824 592 aaKnown RBP8.42□□□□□ -1.06
CHD8-202ENST00000430710 STAG3Q9UJ98 1225 aa8.42□□□□□ -1.06
CHD8-202ENST00000430710 PHF23Q9BUL5 403 aaPredicted RBP8.41□□□□□ -1.06
CHD8-202ENST00000430710 UPF2Q9HAU5 1272 aaKnown RBP8.4□□□□□ -1.07
CHD8-202ENST00000430710 HNRNPUQ00839 825 aaKnown RBP eCLIP8.39□□□□□ -1.07
CHD8-202ENST00000430710 ZBTB7CA1YPR0 619 aa8.37□□□□□ -1.07
CHD8-202ENST00000430710 C14orf37Q86TY3 774 aa8.37□□□□□ -1.07
CHD8-202ENST00000430710 CCDC136Q96JN2 1154 aa8.36□□□□□ -1.07
CHD8-202ENST00000430710 ZNF326Q5BKZ1 582 aaKnown RBP8.35□□□□□ -1.07
CHD8-202ENST00000430710 HSP90AA1P07900 732 aaKnown RBP8.35□□□□□ -1.07
CHD8-202ENST00000430710 BCL11AQ9H165 835 aa8.35□□□□□ -1.07
CHD8-202ENST00000430710 MIER1Q8N108 512 aa8.34□□□□□ -1.07
CHD8-202ENST00000430710 CSRNP3Q8WYN3 585 aa8.34□□□□□ -1.07
CHD8-202ENST00000430710 ERCC6Q03468 1493 aa8.34□□□□□ -1.07
CHD8-202ENST00000430710 DDRGK1Q96HY6 314 aa8.33□□□□□ -1.08
CHD8-202ENST00000430710 TONSLQ96HA7 1378 aa8.33□□□□□ -1.08
CHD8-202ENST00000430710 DDX10Q13206 875 aaKnown RBP8.32□□□□□ -1.08
CHD8-202ENST00000430710 CHGAP10645 457 aaKnown RBP8.32□□□□□ -1.08
CHD8-202ENST00000430710 HAP1P54257 671 aaPredicted RBP8.32□□□□□ -1.08
CHD8-202ENST00000430710 ZNF777Q9ULD5 760 aaPredicted RBP8.29□□□□□ -1.08
CHD8-202ENST00000430710 NEFMP07197 916 aa8.29□□□□□ -1.08
CHD8-202ENST00000430710 P3H3Q8IVL6 736 aa8.29□□□□□ -1.08
CHD8-202ENST00000430710 ERICH6BQ5W0A0 696 aa8.29□□□□□ -1.08
CHD8-202ENST00000430710 FAM9BQ8IZU0 186 aa8.29□□□□□ -1.08
CHD8-202ENST00000430710 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.29□□□□□ -1.08
CHD8-202ENST00000430710 TNNT2P45379 298 aaPredicted RBP8.28□□□□□ -1.08
CHD8-202ENST00000430710 TRIM44Q96DX7 344 aaPredicted RBP8.27□□□□□ -1.09
CHD8-202ENST00000430710 PPM1GO15355 546 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms