RNA–Protein interactions for RNA: ENST00000452707.1

NUDC-203, Transcript of nuclear distribution C, dynein complex regulator, humanhuman

TSL 3

Gene NUDC, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDC-203ENST00000452707 NISCHQ9Y2I1 1504 aa55.27■■■■■ 6.44
NUDC-203ENST00000452707 CCDC180Q9P1Z9 1646 aa49.33■■■■■ 5.49
NUDC-203ENST00000452707 ABCC9O60706 1549 aa48.83■■■■■ 5.41
NUDC-203ENST00000452707 RB1CC1Q8TDY2 1594 aa46.73■■■■■ 5.07
NUDC-203ENST00000452707 NACADO15069 1562 aa46.58■■■■■ 5.05
NUDC-203ENST00000452707 DCAF8L2P0C7V8 631 aa46.38■■■■■ 5.02
NUDC-203ENST00000452707 MYO15BQ96JP2 1530 aa46.17■■■■■ 4.98
NUDC-203ENST00000452707 ZCCHC6Q5VYS8 1495 aaKnown RBP45.92■■■■■ 4.94
NUDC-203ENST00000452707 DCAF1Q9Y4B6 1507 aa45.75■■■■■ 4.91
NUDC-203ENST00000452707 PABPN1Q86U42 306 aaKnown RBP eCLIP45.56■■■■■ 4.88
NUDC-203ENST00000452707 UNC13AQ9UPW8 1703 aa45.55■■■■■ 4.88
NUDC-203ENST00000452707 DNAJC5BQ9UF47 199 aa45.4■■■■■ 4.86
NUDC-203ENST00000452707 BICRAQ9NZM4 1560 aa45.34■■■■■ 4.85
NUDC-203ENST00000452707 SCRIBQ14160 1630 aa44.93■■■■■ 4.78
NUDC-203ENST00000452707 SHROOM4Q9ULL8 1493 aa44.89■■■■■ 4.78
NUDC-203ENST00000452707 EIF4G1Q04637 1599 aaKnown RBP44.19■■■■■ 4.66
NUDC-203ENST00000452707 CC2D2AQ9P2K1 1620 aa44.13■■■■■ 4.65
NUDC-203ENST00000452707 CECR2Q9BXF3 1484 aa43.96■■■■■ 4.63
NUDC-203ENST00000452707 NCAPD3P42695 1498 aa43.03■■■■■ 4.48
NUDC-203ENST00000452707 SMARCA4P51532 1647 aa42.96■■■■■ 4.47
NUDC-203ENST00000452707 ATAD2BQ9ULI0 1458 aa42.94■■■■■ 4.46
NUDC-203ENST00000452707 BAZ1AQ9NRL2 1556 aaPredicted RBP42.86■■■■■ 4.45
NUDC-203ENST00000452707 SMARCA2P51531 1590 aa42.83■■■■■ 4.45
NUDC-203ENST00000452707 HMGXB3Q12766 1538 aa42.71■■■■■ 4.43
NUDC-203ENST00000452707 PEG3Q9GZU2 1588 aa42.61■■■■■ 4.41
NUDC-203ENST00000452707 MROH2BQ7Z745 1585 aa42.56■■■■■ 4.4
NUDC-203ENST00000452707 BAZ1BQ9UIG0 1483 aaKnown RBP42.51■■■■■ 4.4
NUDC-203ENST00000452707 ERCC6Q03468 1493 aa42.14■■■■■ 4.34
NUDC-203ENST00000452707 NESP48681 1621 aa42.09■■■■■ 4.33
NUDC-203ENST00000452707 WIZO95785 1651 aa42.02■■■■■ 4.32
NUDC-203ENST00000452707 CUX2O14529 1486 aa41.96■■■■■ 4.31
NUDC-203ENST00000452707 LAMC3Q9Y6N6 1575 aa41.92■■■■■ 4.3
NUDC-203ENST00000452707 RSF1Q96T23 1441 aaPredicted RBP41.91■■■■■ 4.3
NUDC-203ENST00000452707 CADPSQ9ULU8 1353 aa41.74■■■■■ 4.27
NUDC-203ENST00000452707 PDS5BQ9NTI5 1447 aa41.71■■■■■ 4.27
NUDC-203ENST00000452707 TOP2AP11388 1531 aaKnown RBP41.59■■■■■ 4.25
NUDC-203ENST00000452707 THOC2Q8NI27 1593 aaKnown RBP41.55■■■■■ 4.24
NUDC-203ENST00000452707 KIF21AQ7Z4S6 1674 aa41.49■■■■■ 4.23
NUDC-203ENST00000452707 DNAJC5Q9H3Z4 198 aa41.38■■■■■ 4.21
NUDC-203ENST00000452707 CFTRP13569 1480 aa41.36■■■■■ 4.21
NUDC-203ENST00000452707 MRC2Q9UBG0 1479 aa41.28■■■■■ 4.2
NUDC-203ENST00000452707 FANCD2Q9BXW9 1451 aa41.21■■■■■ 4.19
NUDC-203ENST00000452707 CEP164Q9UPV0 1460 aa41.21■■■■■ 4.19
NUDC-203ENST00000452707 WDR62O43379 1518 aa41.15■■■■■ 4.18
NUDC-203ENST00000452707 CCDC88BA6NC98 1476 aa41.13■■■■■ 4.17
NUDC-203ENST00000452707 PRDM2Q13029 1718 aa40.84■■■■■ 4.13
NUDC-203ENST00000452707 URB2Q14146 1524 aaKnown RBP40.83■■■■■ 4.13
NUDC-203ENST00000452707 ABCC8Q09428 1581 aa40.49■■■■■ 4.07
NUDC-203ENST00000452707 TOPBP1Q92547 1522 aa40.48■■■■■ 4.07
NUDC-203ENST00000452707 IFT140Q96RY7 1462 aa40.4■■■■■ 4.06
NUDC-203ENST00000452707 DNMBPQ6XZF7 1577 aa40.37■■■■■ 4.05
NUDC-203ENST00000452707 SUPT5HO00267 1087 aaKnown RBP40.37■■■■■ 4.05
NUDC-203ENST00000452707 ZNF608Q9ULD9 1512 aaPredicted RBP40.22■■■■■ 4.03
NUDC-203ENST00000452707 OSCARQ8IYS5 282 aa40.14■■■■■ 4.02
NUDC-203ENST00000452707 POLA1P09884 1462 aaPredicted RBP40.11■■■■■ 4.01
NUDC-203ENST00000452707 TARBP1Q13395 1621 aaKnown RBP40.06■■■■■ 4
NUDC-203ENST00000452707 EIF4G3O43432 1585 aaKnown RBP39.99■■■■□ 3.99
NUDC-203ENST00000452707 SOGA1O94964 1423 aa39.96■■■■□ 3.99
NUDC-203ENST00000452707 CUX1P39880 1505 aa39.96■■■■□ 3.99
NUDC-203ENST00000452707 AQRO60306 1485 aaKnown RBP eCLIP39.94■■■■□ 3.981e-14■■■□□ 14.9
NUDC-203ENST00000452707 RAD54L2Q9Y4B4 1467 aa39.93■■■■□ 3.98
NUDC-203ENST00000452707 FGD5Q6ZNL6 1462 aa39.91■■■■□ 3.98
NUDC-203ENST00000452707 TDRD9Q8NDG6 1382 aaKnown RBP39.79■■■■□ 3.96
NUDC-203ENST00000452707 WDR97A6NE52 1622 aa39.76■■■■□ 3.95
NUDC-203ENST00000452707 TRIM41Q8WV44 630 aa39.67■■■■□ 3.94
NUDC-203ENST00000452707 FBLN2P98095 1184 aa39.56■■■■□ 3.92
NUDC-203ENST00000452707 GRIN2BQ13224 1484 aa39.56■■■■□ 3.92
NUDC-203ENST00000452707 CHD1O14646 1710 aa39.55■■■■□ 3.92
NUDC-203ENST00000452707 SNAPC4Q5SXM2 1469 aa39.55■■■■□ 3.92
NUDC-203ENST00000452707 ABCA10Q8WWZ4 1543 aa39.53■■■■□ 3.92
NUDC-203ENST00000452707 WRNQ14191 1432 aaPredicted RBP eCLIP39.52■■■■□ 3.92
NUDC-203ENST00000452707 MAGI1Q96QZ7 1491 aaPredicted RBP39.5■■■■□ 3.91
NUDC-203ENST00000452707 GAPVD1Q14C86 1478 aa39.47■■■■□ 3.91
NUDC-203ENST00000452707 TOP2BQ02880 1626 aa39.46■■■■□ 3.91
NUDC-203ENST00000452707 RIMBP3CA6NJZ7 1639 aa39.45■■■■□ 3.91
NUDC-203ENST00000452707 RIMBP3BA6NNM3 1639 aa39.45■■■■□ 3.91
NUDC-203ENST00000452707 RIMBP3Q9UFD9 1639 aa39.45■■■■□ 3.91
NUDC-203ENST00000452707 BIVM-ERCC5R4GMW8 1640 aa39.43■■■■□ 3.9
NUDC-203ENST00000452707 ARHGEF11O15085 1522 aa39.42■■■■□ 3.9
NUDC-203ENST00000452707 CHMP7Q8WUX9 453 aaPredicted RBP39.41■■■■□ 3.9
NUDC-203ENST00000452707 SYNJ1O43426 1573 aa39.39■■■■□ 3.9
NUDC-203ENST00000452707 ABCA5Q8WWZ7 1642 aa39.36■■■■□ 3.89
NUDC-203ENST00000452707 SYNJ2O15056 1496 aa39.36■■■■□ 3.89
NUDC-203ENST00000452707 PBRM1Q86U86 1689 aa39.31■■■■□ 3.88
NUDC-203ENST00000452707 CLASP1Q7Z460 1538 aa39.22■■■■□ 3.87
NUDC-203ENST00000452707 CYB5RLQ6IPT4 315 aa39.12■■■■□ 3.85
NUDC-203ENST00000452707 ARAP1Q96P48 1450 aa39.08■■■■□ 3.85
NUDC-203ENST00000452707 ERICH3Q5RHP9 1530 aa39.04■■■■□ 3.84
NUDC-203ENST00000452707 ADAMTS12P58397 1594 aa39.04■■■■□ 3.84
NUDC-203ENST00000452707 GRIN2AQ12879 1464 aa39.03■■■■□ 3.84
NUDC-203ENST00000452707 FHAD1B1AJZ9 1412 aa39.02■■■■□ 3.84
NUDC-203ENST00000452707 NUP160Q12769 1436 aa38.91■■■■□ 3.82
NUDC-203ENST00000452707 CEP170Q5SW79 1584 aa38.82■■■■□ 3.81
NUDC-203ENST00000452707 KIF27Q86VH2 1401 aa38.75■■■■□ 3.79
NUDC-203ENST00000452707 IGF1RP08069 1367 aa38.7■■■■□ 3.78
NUDC-203ENST00000452707 SHROOM2Q13796 1616 aa38.63■■■■□ 3.77
NUDC-203ENST00000452707 ERCC6L2Q5T890 1561 aa38.59■■■■□ 3.77
NUDC-203ENST00000452707 JPH4Q96JJ6 628 aa38.53■■■■□ 3.76
NUDC-203ENST00000452707 CUL7Q14999 1698 aa38.52■■■■□ 3.76
NUDC-203ENST00000452707 TRHP20396 242 aaPredicted RBP38.5■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms