RNA–Protein interactions for RNA: ENST00000533641.5

CAPRIN1-214, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-214ENST00000533641 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
CAPRIN1-214ENST00000533641 CHIC1Q5VXU3 224 aa21.66■■□□□ 1.06
CAPRIN1-214ENST00000533641 SENP3Q9H4L4 574 aaPredicted RBP19.83■□□□□ 0.77
CAPRIN1-214ENST00000533641 PHF23Q9BUL5 403 aaPredicted RBP19.5■□□□□ 0.71
CAPRIN1-214ENST00000533641 FOXD1Q16676 465 aa18.5■□□□□ 0.55
CAPRIN1-214ENST00000533641 POTEDQ86YR6 584 aa17.69■□□□□ 0.42
CAPRIN1-214ENST00000533641 MSH5O43196 834 aa17.5■□□□□ 0.39
CAPRIN1-214ENST00000533641 PIAS4Q8N2W9 510 aaPredicted RBP17.21■□□□□ 0.35
CAPRIN1-214ENST00000533641 PLPPR3Q6T4P5 718 aa17.12■□□□□ 0.33
CAPRIN1-214ENST00000533641 PPP6R1Q9UPN7 881 aa16.99■□□□□ 0.31
CAPRIN1-214ENST00000533641 ADRA2BP18089 450 aa16.92■□□□□ 0.3
CAPRIN1-214ENST00000533641 MAPK8IP2Q13387 824 aaPredicted RBP15.65■□□□□ 0.1
CAPRIN1-214ENST00000533641 DMRT2Q9Y5R5 561 aa15.65■□□□□ 0.1
CAPRIN1-214ENST00000533641 SCAF1Q9H7N4 1312 aaKnown RBP15.54■□□□□ 0.08
CAPRIN1-214ENST00000533641 CACNB1Q02641 598 aaPredicted RBP15.24■□□□□ 0.03
CAPRIN1-214ENST00000533641 DCAF8L1A6NGE4 600 aa15.04■□□□□ -0
CAPRIN1-214ENST00000533641 PPP4R3CPQ6ZMV5 832 aa14.95□□□□□ -0.02
CAPRIN1-214ENST00000533641 HOXD11P31277 338 aaPredicted RBP14.93□□□□□ -0.02
CAPRIN1-214ENST00000533641 RNF39Q9H2S5 420 aa14.87□□□□□ -0.03
CAPRIN1-214ENST00000533641 CNKSR2Q8WXI2 1034 aa14.76□□□□□ -0.05
CAPRIN1-214ENST00000533641 RNF216Q9NWF9 866 aaPredicted RBP14.73□□□□□ -0.05
CAPRIN1-214ENST00000533641 C1QBPQ07021 282 aaKnown RBP14.65□□□□□ -0.06
CAPRIN1-214ENST00000533641 DNAJC5BQ9UF47 199 aa14.51□□□□□ -0.09
CAPRIN1-214ENST00000533641 NCBP3Q53F19 620 aaKnown RBP14.29□□□□□ -0.12
CAPRIN1-214ENST00000533641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.131e-31■■■■□ 21.3
CAPRIN1-214ENST00000533641 NPM3O75607 178 aaKnown RBP14.04□□□□□ -0.16
CAPRIN1-214ENST00000533641 U3KPZ7 1027 aaPredicted RBP13.88□□□□□ -0.19
CAPRIN1-214ENST00000533641 CAPN15O75808 1086 aa13.81□□□□□ -0.2
CAPRIN1-214ENST00000533641 DSG3P32926 999 aa13.8□□□□□ -0.2
CAPRIN1-214ENST00000533641 POTEHQ6S545 545 aa13.8□□□□□ -0.2
CAPRIN1-214ENST00000533641 SPINK5Q9NQ38 1064 aaPredicted RBP13.78□□□□□ -0.2
CAPRIN1-214ENST00000533641 APLP2Q06481 763 aa13.51□□□□□ -0.25
CAPRIN1-214ENST00000533641 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
CAPRIN1-214ENST00000533641 TRHP20396 242 aaPredicted RBP13.49□□□□□ -0.25
CAPRIN1-214ENST00000533641 ZNF219Q9P2Y4 722 aaPredicted RBP13.47□□□□□ -0.25
CAPRIN1-214ENST00000533641 ABCB7O75027 752 aa13.44□□□□□ -0.26
CAPRIN1-214ENST00000533641 KCNA4P22459 653 aa13.43□□□□□ -0.26
CAPRIN1-214ENST00000533641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.39□□□□□ -0.27
CAPRIN1-214ENST00000533641 HNRNPUL2Q1KMD3 747 aaKnown RBP13.39□□□□□ -0.27
CAPRIN1-214ENST00000533641 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
CAPRIN1-214ENST00000533641 RBM42Q9BTD8 480 aaKnown RBP13.22□□□□□ -0.29
CAPRIN1-214ENST00000533641 CHRDL2Q6WN34 429 aa13.05□□□□□ -0.32
CAPRIN1-214ENST00000533641 POLA2Q14181 598 aa13.03□□□□□ -0.32
CAPRIN1-214ENST00000533641 MYCNP04198 464 aaPredicted RBP13.02□□□□□ -0.33
CAPRIN1-214ENST00000533641 AKT1S1Q96B36 256 aa12.82□□□□□ -0.36
CAPRIN1-214ENST00000533641 ZBTB12Q9Y330 459 aaPredicted RBP12.77□□□□□ -0.37
CAPRIN1-214ENST00000533641 SP7Q8TDD2 431 aaPredicted RBP12.76□□□□□ -0.37
CAPRIN1-214ENST00000533641 ATF5Q9Y2D1 282 aaPredicted RBP12.71□□□□□ -0.37
CAPRIN1-214ENST00000533641 REM2Q8IYK8 340 aaPredicted RBP12.68□□□□□ -0.38
CAPRIN1-214ENST00000533641 FOXD4L1Q9NU39 408 aa12.68□□□□□ -0.38
CAPRIN1-214ENST00000533641 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
CAPRIN1-214ENST00000533641 OSCARQ8IYS5 282 aa12.63□□□□□ -0.39
CAPRIN1-214ENST00000533641 SLC4A1APQ9BWU0 796 aaKnown RBP12.62□□□□□ -0.39
CAPRIN1-214ENST00000533641 HAX1O00165 279 aa12.54□□□□□ -0.4
CAPRIN1-214ENST00000533641 PITPNM1O00562 1244 aa12.54□□□□□ -0.4
CAPRIN1-214ENST00000533641 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.411e-8■□□□□ 8.9
CAPRIN1-214ENST00000533641 SPDYE2BA6NHP3 402 aa12.33□□□□□ -0.44
CAPRIN1-214ENST00000533641 SPDYE6P0CI01 402 aa12.33□□□□□ -0.44
CAPRIN1-214ENST00000533641 ATXN8OSP0DMR3 200 aa12.33□□□□□ -0.44
CAPRIN1-214ENST00000533641 SPDYE2Q495Y8 402 aa12.33□□□□□ -0.44
CAPRIN1-214ENST00000533641 ZBTB22O15209 634 aa12.32□□□□□ -0.44
CAPRIN1-214ENST00000533641 EVX2Q03828 476 aa12.31□□□□□ -0.44
CAPRIN1-214ENST00000533641 FBLN2P98095 1184 aa12.29□□□□□ -0.44
CAPRIN1-214ENST00000533641 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
CAPRIN1-214ENST00000533641 SPDYE1Q8NFV5 336 aaPredicted RBP12.22□□□□□ -0.45
CAPRIN1-214ENST00000533641 CLEC11AQ9Y240 323 aa12.21□□□□□ -0.45
CAPRIN1-214ENST00000533641 C19orf67A6NJJ6 358 aa12.13□□□□□ -0.47
CAPRIN1-214ENST00000533641 ZNF692Q9BU19 519 aaPredicted RBP12.12□□□□□ -0.47
CAPRIN1-214ENST00000533641 MKRN4PQ13434 485 aaPredicted RBP12.11□□□□□ -0.47
CAPRIN1-214ENST00000533641 SSUH2Q9Y2M2 353 aa12.11□□□□□ -0.47
CAPRIN1-214ENST00000533641 GABBR2O75899 941 aa12.05□□□□□ -0.48
CAPRIN1-214ENST00000533641 CHADLQ6NUI6 762 aa11.99□□□□□ -0.49
CAPRIN1-214ENST00000533641 LHX8Q68G74 356 aa11.97□□□□□ -0.49
CAPRIN1-214ENST00000533641 PRR29P0C7W0 189 aa11.95□□□□□ -0.5
CAPRIN1-214ENST00000533641 PABPN1Q86U42 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
CAPRIN1-214ENST00000533641 CD44P16070 742 aaKnown RBP11.82□□□□□ -0.52
CAPRIN1-214ENST00000533641 FARP1Q9Y4F1 1045 aaPredicted RBP11.79□□□□□ -0.52
CAPRIN1-214ENST00000533641 POTEIP0CG38 1075 aa11.77□□□□□ -0.53
CAPRIN1-214ENST00000533641 CLCN6P51797 869 aa11.77□□□□□ -0.53
CAPRIN1-214ENST00000533641 DCBLD2Q96PD2 775 aa11.66□□□□□ -0.54
CAPRIN1-214ENST00000533641 ZNF579Q8NAF0 562 aaKnown RBP11.62□□□□□ -0.55
CAPRIN1-214ENST00000533641 ZRANB1Q9UGI0 708 aa11.6□□□□□ -0.55
CAPRIN1-214ENST00000533641 CREBZFQ9NS37 354 aa11.54□□□□□ -0.56
CAPRIN1-214ENST00000533641 STAG3Q9UJ98 1225 aa11.54□□□□□ -0.56
CAPRIN1-214ENST00000533641 PLSCR2Q9NRY7 297 aa11.51□□□□□ -0.57
CAPRIN1-214ENST00000533641 GALR2O43603 387 aaPredicted RBP11.49□□□□□ -0.57
CAPRIN1-214ENST00000533641 PAK3O75914 559 aaPredicted RBP11.45□□□□□ -0.58
CAPRIN1-214ENST00000533641 CSRNP3Q8WYN3 585 aa11.42□□□□□ -0.58
CAPRIN1-214ENST00000533641 OTUD5Q96G74 571 aa11.41□□□□□ -0.58
CAPRIN1-214ENST00000533641 PHF12Q96QT6 1004 aa11.39□□□□□ -0.59
CAPRIN1-214ENST00000533641 SPDYE4A6NLX3 237 aa11.37□□□□□ -0.59
CAPRIN1-214ENST00000533641 POTEB2H3BUK9 544 aa11.37□□□□□ -0.59
CAPRIN1-214ENST00000533641 NPM1P06748 294 aaKnown RBP eCLIP11.36□□□□□ -0.59
CAPRIN1-214ENST00000533641 POTEMA6NI47 508 aa11.29□□□□□ -0.6
CAPRIN1-214ENST00000533641 PELP1Q8IZL8 1130 aaKnown RBP11.29□□□□□ -0.6
CAPRIN1-214ENST00000533641 MNX1P50219 401 aaPredicted RBP11.28□□□□□ -0.6
CAPRIN1-214ENST00000533641 POTEGQ6S5H5 508 aa11.24□□□□□ -0.61
CAPRIN1-214ENST00000533641 ASTLQ6HA08 431 aaPredicted RBP11.23□□□□□ -0.61
CAPRIN1-214ENST00000533641 MS4A3Q96HJ5 214 aa11.23□□□□□ -0.61
CAPRIN1-214ENST00000533641 METRNQ9UJH8 293 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms